RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 DDB1Q16531 1140 aa22.93■■□□□ 1.26
TMEM41A-201ENST00000296254 SIN3AQ96ST3 1273 aa22.93■■□□□ 1.26
TMEM41A-201ENST00000296254 AXIN2Q9Y2T1 843 aa22.93■■□□□ 1.26
TMEM41A-201ENST00000296254 NFAT5O94916 1531 aa22.92■■□□□ 1.26
TMEM41A-201ENST00000296254 SBF2Q86WG5 1849 aa22.92■■□□□ 1.26
TMEM41A-201ENST00000296254 TTC21AQ8NDW8 1320 aa22.92■■□□□ 1.26
TMEM41A-201ENST00000296254 ARHGEF25Q86VW2 580 aa22.92■■□□□ 1.26
TMEM41A-201ENST00000296254 ZNF692Q9BU19 519 aaPredicted RBP22.92■■□□□ 1.26
TMEM41A-201ENST00000296254 KCNH5Q8NCM2 988 aa22.91■■□□□ 1.26
TMEM41A-201ENST00000296254 ABCC6O95255 1503 aa22.91■■□□□ 1.26
TMEM41A-201ENST00000296254 BCL9O00512 1426 aa22.91■■□□□ 1.26
TMEM41A-201ENST00000296254 SBNO2Q9Y2G9 1366 aa22.89■■□□□ 1.26
TMEM41A-201ENST00000296254 MON2Q7Z3U7 1717 aa22.89■■□□□ 1.26
TMEM41A-201ENST00000296254 CDCA7Q9BWT1 371 aaPredicted RBP22.88■■□□□ 1.25
TMEM41A-201ENST00000296254 RGPD5Q99666 1765 aa22.87■■□□□ 1.25
TMEM41A-201ENST00000296254 PLSCR1O15162 318 aa22.87■■□□□ 1.25
TMEM41A-201ENST00000296254 KTN1Q86UP2 1357 aaKnown RBP22.87■■□□□ 1.25
TMEM41A-201ENST00000296254 SOX12O15370 315 aa22.86■■□□□ 1.25
TMEM41A-201ENST00000296254 NEUROD1Q13562 356 aa22.86■■□□□ 1.25
TMEM41A-201ENST00000296254 CARD10Q9BWT7 1032 aa22.86■■□□□ 1.25
TMEM41A-201ENST00000296254 BCL11BQ9C0K0 894 aaPredicted RBP22.86■■□□□ 1.25
TMEM41A-201ENST00000296254 USP54Q70EL1 1684 aa22.85■■□□□ 1.25
TMEM41A-201ENST00000296254 MARCH10Q8NA82 808 aaPredicted RBP22.85■■□□□ 1.25
TMEM41A-201ENST00000296254 PTF1AQ7RTS3 328 aa22.84■■□□□ 1.25
TMEM41A-201ENST00000296254 TNS2Q63HR2 1409 aa22.83■■□□□ 1.25
TMEM41A-201ENST00000296254 CSB-PGBD3P0DP91 1061 aa22.83■■□□□ 1.25
TMEM41A-201ENST00000296254 SPON1Q9HCB6 807 aa22.83■■□□□ 1.25
TMEM41A-201ENST00000296254 ANO8Q9HCE9 1232 aaPredicted RBP22.83■■□□□ 1.25
TMEM41A-201ENST00000296254 CASZ1Q86V15 1759 aa22.82■■□□□ 1.24
TMEM41A-201ENST00000296254 CD163L1Q9NR16 1453 aa22.82■■□□□ 1.24
TMEM41A-201ENST00000296254 USP31Q70CQ4 1352 aa22.82■■□□□ 1.24
TMEM41A-201ENST00000296254 CCDC7Q96M83 1385 aa22.82■■□□□ 1.24
TMEM41A-201ENST00000296254 KCNQ2O43526 872 aa22.81■■□□□ 1.24
TMEM41A-201ENST00000296254 NINLQ9Y2I6 1382 aa22.8■■□□□ 1.24
TMEM41A-201ENST00000296254 PPP1R1BQ9UD71 204 aaPredicted RBP22.78■■□□□ 1.24
TMEM41A-201ENST00000296254 ERBB3P21860 1342 aa22.78■■□□□ 1.24
TMEM41A-201ENST00000296254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.77■■□□□ 1.24
TMEM41A-201ENST00000296254 PROM2Q8N271 834 aa22.77■■□□□ 1.24
TMEM41A-201ENST00000296254 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
TMEM41A-201ENST00000296254 NHSQ6T4R5 1651 aa22.76■■□□□ 1.23
TMEM41A-201ENST00000296254 EXOC5O00471 708 aa22.75■■□□□ 1.23
TMEM41A-201ENST00000296254 NME9Q86XW9 330 aa22.75■■□□□ 1.23
TMEM41A-201ENST00000296254 LTN1O94822 1766 aa22.75■■□□□ 1.23
TMEM41A-201ENST00000296254 EDC4Q6P2E9 1401 aaKnown RBP22.74■■□□□ 1.23
TMEM41A-201ENST00000296254 UTRNP46939 3433 aa22.74■■□□□ 1.23
TMEM41A-201ENST00000296254 PDGFDQ9GZP0 370 aaPredicted RBP22.72■■□□□ 1.23
TMEM41A-201ENST00000296254 A0A1W2PP64 1363 aa22.72■■□□□ 1.23
TMEM41A-201ENST00000296254 TXNRD1Q16881 649 aa22.71■■□□□ 1.23
TMEM41A-201ENST00000296254 TMC1Q8TDI8 760 aa22.71■■□□□ 1.23
TMEM41A-201ENST00000296254 HDGFL2Q7Z4V5 671 aaPredicted RBP22.7■■□□□ 1.22
TMEM41A-201ENST00000296254 MYOM1P52179 1685 aa22.69■■□□□ 1.22
TMEM41A-201ENST00000296254 SLC12A5Q9H2X9 1139 aa22.69■■□□□ 1.22
TMEM41A-201ENST00000296254 NLRP2Q9NX02 1062 aa22.69■■□□□ 1.22
TMEM41A-201ENST00000296254 YY1P25490 414 aa22.68■■□□□ 1.22
TMEM41A-201ENST00000296254 PAPPAQ13219 1627 aa22.68■■□□□ 1.22
TMEM41A-201ENST00000296254 TONSLQ96HA7 1378 aa22.67■■□□□ 1.22
TMEM41A-201ENST00000296254 ZBTB7AO95365 584 aa22.67■■□□□ 1.22
TMEM41A-201ENST00000296254 IL2RBP14784 551 aa22.67■■□□□ 1.22
TMEM41A-201ENST00000296254 ANKRD24Q8TF21 1146 aa22.67■■□□□ 1.22
TMEM41A-201ENST00000296254 STK32BQ9NY57 414 aa22.67■■□□□ 1.22
TMEM41A-201ENST00000296254 TERF2IPQ9NYB0 399 aa22.67■■□□□ 1.22
TMEM41A-201ENST00000296254 PTGER2P43116 358 aa22.66■■□□□ 1.22
TMEM41A-201ENST00000296254 SLC15A2Q16348 729 aa22.66■■□□□ 1.22
TMEM41A-201ENST00000296254 PUS7Q96PZ0 661 aaKnown RBP22.66■■□□□ 1.22
TMEM41A-201ENST00000296254 ACSBG1Q96GR2 724 aa22.64■■□□□ 1.21
TMEM41A-201ENST00000296254 FAM208AQ9UK61 1670 aaKnown RBP22.64■■□□□ 1.21
TMEM41A-201ENST00000296254 BTAF1O14981 1849 aa22.64■■□□□ 1.21
TMEM41A-201ENST00000296254 DCAF8L1A6NGE4 600 aa22.63■■□□□ 1.21
TMEM41A-201ENST00000296254 TESK2Q96S53 571 aa22.6■■□□□ 1.21
TMEM41A-201ENST00000296254 MTFR1LQ9H019 292 aa22.6■■□□□ 1.21
TMEM41A-201ENST00000296254 ATF5Q9Y2D1 282 aaPredicted RBP22.6■■□□□ 1.21
TMEM41A-201ENST00000296254 IP6K1Q92551 441 aa22.59■■□□□ 1.21
TMEM41A-201ENST00000296254 SGIP1Q9BQI5 828 aa22.58■■□□□ 1.21
TMEM41A-201ENST00000296254 ST20-MTHFSA0A0A6YYL1 179 aa22.55■■□□□ 1.2
TMEM41A-201ENST00000296254 FHDC1Q9C0D6 1143 aaPredicted RBP22.55■■□□□ 1.2
TMEM41A-201ENST00000296254 MAP3K19Q56UN5 1328 aa22.55■■□□□ 1.2
TMEM41A-201ENST00000296254 ZNF827Q17R98 1081 aa22.54■■□□□ 1.2
TMEM41A-201ENST00000296254 COG3Q96JB2 828 aa22.54■■□□□ 1.2
TMEM41A-201ENST00000296254 LRRC4BQ9NT99 713 aa22.54■■□□□ 1.2
TMEM41A-201ENST00000296254 ANKRD36BQ8N2N9 1353 aa22.53■■□□□ 1.2
TMEM41A-201ENST00000296254 LTV1Q96GA3 475 aaPredicted RBP22.53■■□□□ 1.2
TMEM41A-201ENST00000296254 SYT17Q9BSW7 474 aa22.53■■□□□ 1.2
TMEM41A-201ENST00000296254 GOLGB1Q14789 3259 aaKnown RBP22.52■■□□□ 1.2
TMEM41A-201ENST00000296254 HOXC9P31274 260 aa22.52■■□□□ 1.2
TMEM41A-201ENST00000296254 RTL1A6NKG5 1358 aa22.51■■□□□ 1.19
TMEM41A-201ENST00000296254 DOT1LQ8TEK3 1739 aa22.51■■□□□ 1.19
TMEM41A-201ENST00000296254 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
TMEM41A-201ENST00000296254 SLC24A1O60721 1099 aa22.51■■□□□ 1.19
TMEM41A-201ENST00000296254 DDX54Q8TDD1 881 aaKnown RBP22.51■■□□□ 1.19
TMEM41A-201ENST00000296254 MEGF6O75095 1541 aa22.51■■□□□ 1.19
TMEM41A-201ENST00000296254 QSER1Q2KHR3 1735 aa22.51■■□□□ 1.19
TMEM41A-201ENST00000296254 MAP3K5Q99683 1374 aa22.5■■□□□ 1.19
TMEM41A-201ENST00000296254 SLC27A3Q5K4L6 730 aa22.5■■□□□ 1.19
TMEM41A-201ENST00000296254 KAT6BQ8WYB5 2073 aa22.49■■□□□ 1.19
TMEM41A-201ENST00000296254 AMPHP49418 695 aa22.48■■□□□ 1.19
TMEM41A-201ENST00000296254 AKT1S1Q96B36 256 aa22.48■■□□□ 1.19
TMEM41A-201ENST00000296254 ARXQ96QS3 562 aa22.48■■□□□ 1.19
TMEM41A-201ENST00000296254 NSD2O96028 1365 aa22.48■■□□□ 1.19
TMEM41A-201ENST00000296254 RGPD2P0DJD1 1756 aa22.48■■□□□ 1.19
TMEM41A-201ENST00000296254 FBLN1P23142 703 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms