RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 ZNF853P0CG23 659 aa17.21■□□□□ 0.35
NCSTN-201ENST00000294785 CPS1P31327 1500 aa17.21■□□□□ 0.35
NCSTN-201ENST00000294785 MFAP1P55081 439 aaKnown RBP17.21■□□□□ 0.35
NCSTN-201ENST00000294785 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
NCSTN-201ENST00000294785 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
NCSTN-201ENST00000294785 TSPOAP1O95153 1857 aa17.2■□□□□ 0.34
NCSTN-201ENST00000294785 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
NCSTN-201ENST00000294785 ZBTB7BO15156 539 aaPredicted RBP17.2■□□□□ 0.34
NCSTN-201ENST00000294785 FAM69CQ0P6D2 419 aa17.2■□□□□ 0.34
NCSTN-201ENST00000294785 BRPF3Q9ULD4 1205 aa17.2■□□□□ 0.34
NCSTN-201ENST00000294785 NRKQ7Z2Y5 1582 aa17.2■□□□□ 0.34
NCSTN-201ENST00000294785 RBM25P49756 843 aaKnown RBP17.19■□□□□ 0.34
NCSTN-201ENST00000294785 ABCC4O15439 1325 aa17.18■□□□□ 0.34
NCSTN-201ENST00000294785 BMP2KLQ5H9B9 411 aa17.18■□□□□ 0.34
NCSTN-201ENST00000294785 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
NCSTN-201ENST00000294785 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
NCSTN-201ENST00000294785 HMOX1P09601 288 aa17.18■□□□□ 0.34
NCSTN-201ENST00000294785 CHMP5Q9NZZ3 219 aa17.18■□□□□ 0.34
NCSTN-201ENST00000294785 COG3Q96JB2 828 aa17.17■□□□□ 0.34
NCSTN-201ENST00000294785 CFAP44Q96MT7 982 aa17.17■□□□□ 0.34
NCSTN-201ENST00000294785 HSCBQ8IWL3 235 aa17.17■□□□□ 0.34
NCSTN-201ENST00000294785 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
NCSTN-201ENST00000294785 NME9Q86XW9 330 aa17.16■□□□□ 0.34
NCSTN-201ENST00000294785 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
NCSTN-201ENST00000294785 CCDC61Q9Y6R9 512 aa17.16■□□□□ 0.34
NCSTN-201ENST00000294785 NCOA3Q9Y6Q9 1424 aa17.16■□□□□ 0.34
NCSTN-201ENST00000294785 METP08581 1390 aa17.16■□□□□ 0.34
NCSTN-201ENST00000294785 SNX21Q969T3 373 aa17.16■□□□□ 0.34
NCSTN-201ENST00000294785 NUDT16Q96DE0 195 aaKnown RBP17.16■□□□□ 0.34
NCSTN-201ENST00000294785 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
NCSTN-201ENST00000294785 FBLN1P23142 703 aa17.15■□□□□ 0.34
NCSTN-201ENST00000294785 L1TD1Q5T7N2 865 aaKnown RBP17.15■□□□□ 0.34
NCSTN-201ENST00000294785 API5Q9BZZ5 524 aaKnown RBP17.15■□□□□ 0.34
NCSTN-201ENST00000294785 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
NCSTN-201ENST00000294785 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
NCSTN-201ENST00000294785 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
NCSTN-201ENST00000294785 EIF5BO60841 1220 aaKnown RBP17.14■□□□□ 0.33
NCSTN-201ENST00000294785 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
NCSTN-201ENST00000294785 TSPYL6Q8N831 410 aa17.13■□□□□ 0.33
NCSTN-201ENST00000294785 MCM4P33991 863 aa17.13■□□□□ 0.33
NCSTN-201ENST00000294785 THUMPD2Q9BTF0 503 aaKnown RBP17.13■□□□□ 0.33
NCSTN-201ENST00000294785 TOPAZ1Q8N9V7 1692 aa17.12■□□□□ 0.33
NCSTN-201ENST00000294785 ANKRD45Q5TZF3 282 aa17.11■□□□□ 0.33
NCSTN-201ENST00000294785 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
NCSTN-201ENST00000294785 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
NCSTN-201ENST00000294785 TXNDC2Q86VQ3 553 aa17.1■□□□□ 0.33
NCSTN-201ENST00000294785 UBR1Q8IWV7 1749 aa17.1■□□□□ 0.33
NCSTN-201ENST00000294785 DDIT3P35638 169 aa17.09■□□□□ 0.33
NCSTN-201ENST00000294785 ZRANB1Q9UGI0 708 aa17.09■□□□□ 0.33
NCSTN-201ENST00000294785 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
NCSTN-201ENST00000294785 C8orf58Q8NAV2 365 aa17.08■□□□□ 0.33
NCSTN-201ENST00000294785 RRS1Q15050 365 aaKnown RBP17.08■□□□□ 0.32
NCSTN-201ENST00000294785 SIRT2Q8IXJ6 389 aa17.08■□□□□ 0.32
NCSTN-201ENST00000294785 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.32
NCSTN-201ENST00000294785 DDX11L8A8MPP1 907 aa17.07■□□□□ 0.32
NCSTN-201ENST00000294785 ESF1Q9H501 851 aaKnown RBP17.07■□□□□ 0.32
NCSTN-201ENST00000294785 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
NCSTN-201ENST00000294785 SPRYD3Q8NCJ5 442 aa17.07■□□□□ 0.32
NCSTN-201ENST00000294785 OVOS2A0A0J9YW53 1432 aa17.07■□□□□ 0.32
NCSTN-201ENST00000294785 OVOS2Q6IE36 1432 aa17.07■□□□□ 0.32
NCSTN-201ENST00000294785 KIAA0232Q92628 1395 aa17.07■□□□□ 0.32
NCSTN-201ENST00000294785 ELL2O00472 640 aaPredicted RBP17.06■□□□□ 0.32
NCSTN-201ENST00000294785 INTS3Q68E01 1043 aaKnown RBP17.06■□□□□ 0.32
NCSTN-201ENST00000294785 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
NCSTN-201ENST00000294785 TNRQ92752 1358 aa17.06■□□□□ 0.32
NCSTN-201ENST00000294785 TMEM2Q9UHN6 1383 aa17.06■□□□□ 0.32
NCSTN-201ENST00000294785 MLECQ14165 292 aa17.05■□□□□ 0.32
NCSTN-201ENST00000294785 PRR36Q9H6K5 1346 aa17.05■□□□□ 0.32
NCSTN-201ENST00000294785 TBC1D9Q6ZT07 1266 aa17.04■□□□□ 0.32
NCSTN-201ENST00000294785 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.04■□□□□ 0.32
NCSTN-201ENST00000294785 CDC45O75419 566 aa17.04■□□□□ 0.32
NCSTN-201ENST00000294785 FSD2A1L4K1 749 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 FAM83GA6ND36 823 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 EIF4A2Q14240 407 aaKnown RBP17.03■□□□□ 0.32
NCSTN-201ENST00000294785 DCTPP1Q9H773 170 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 TTC21BQ7Z4L5 1316 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 KIF2CQ99661 725 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 NCKAP5LQ9HCH0 1330 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 PLEKHG3A1L390 1219 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 GOLGA6L3A6NEY3 463 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 TRAK2O60296 914 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 HSP90AB1P08238 724 aaKnown RBP17.03■□□□□ 0.32
NCSTN-201ENST00000294785 PTMSP20962 102 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 PTPRCP08575 1304 aa17.03■□□□□ 0.32
NCSTN-201ENST00000294785 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.32
NCSTN-201ENST00000294785 ADAMTS13Q76LX8 1427 aa17.02■□□□□ 0.32
NCSTN-201ENST00000294785 CHL1O00533 1208 aa17.02■□□□□ 0.32
NCSTN-201ENST00000294785 ISY1Q9ULR0 285 aaKnown RBP17.02■□□□□ 0.32
NCSTN-201ENST00000294785 RGS12O14924 1447 aa17.02■□□□□ 0.32
NCSTN-201ENST00000294785 PEAK1Q9H792 1746 aa17.02■□□□□ 0.31
NCSTN-201ENST00000294785 FMN2Q9NZ56 1722 aa17.02■□□□□ 0.31
NCSTN-201ENST00000294785 RPAP2Q8IXW5 612 aaPredicted RBP17.02■□□□□ 0.31
NCSTN-201ENST00000294785 USP31Q70CQ4 1352 aa17.02■□□□□ 0.31
NCSTN-201ENST00000294785 USP6P35125 1406 aa17.02■□□□□ 0.31
NCSTN-201ENST00000294785 SULT6B1Q6IMI4 303 aa17.01■□□□□ 0.31
NCSTN-201ENST00000294785 ATP10DQ9P241 1426 aa17.01■□□□□ 0.31
NCSTN-201ENST00000294785 KIF13AQ9H1H9 1805 aa17.01■□□□□ 0.31
NCSTN-201ENST00000294785 PLEKHG1Q9ULL1 1385 aa17■□□□□ 0.31
NCSTN-201ENST00000294785 ANKRD44Q8N8A2 993 aa17■□□□□ 0.31
NCSTN-201ENST00000294785 DCTN1Q14203 1278 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms