RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.37
FUBP1-201ENST00000294623 PPIP5K1Q6PFW1 1433 aa17.39■□□□□ 0.37
FUBP1-201ENST00000294623 KIF24Q5T7B8 1368 aa17.39■□□□□ 0.37
FUBP1-201ENST00000294623 PRPF40AO75400 957 aaKnown RBP17.39■□□□□ 0.37
FUBP1-201ENST00000294623 MCM2P49736 904 aa17.39■□□□□ 0.37
FUBP1-201ENST00000294623 GABPB1Q06547 395 aaPredicted RBP17.39■□□□□ 0.37
FUBP1-201ENST00000294623 ZNF710Q8N1W2 664 aa17.39■□□□□ 0.37
FUBP1-201ENST00000294623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.371e-6■■□□□ 13.6
FUBP1-201ENST00000294623 FOXD4L1Q9NU39 408 aa17.39■□□□□ 0.37
FUBP1-201ENST00000294623 NOLC1Q14978 699 aaKnown RBP eCLIP17.38■□□□□ 0.377e-12■■□□□ 12.4
FUBP1-201ENST00000294623 PDCL2Q8N4E4 241 aa17.38■□□□□ 0.37
FUBP1-201ENST00000294623 NOB1Q9ULX3 412 aaKnown RBP17.38■□□□□ 0.37
FUBP1-201ENST00000294623 ATAD2Q6PL18 1390 aa17.38■□□□□ 0.37
FUBP1-201ENST00000294623 FAM193AP78312 1265 aa17.37■□□□□ 0.37
FUBP1-201ENST00000294623 CHAF1AQ13111 956 aaPredicted RBP17.37■□□□□ 0.37
FUBP1-201ENST00000294623 TMEM63CQ9P1W3 806 aa17.37■□□□□ 0.37
FUBP1-201ENST00000294623 PTCH1Q13635 1447 aa17.37■□□□□ 0.37
FUBP1-201ENST00000294623 EXOSC9Q06265 439 aaKnown RBP17.37■□□□□ 0.37
FUBP1-201ENST00000294623 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
FUBP1-201ENST00000294623 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
FUBP1-201ENST00000294623 SYCE3A1L190 88 aa17.36■□□□□ 0.37
FUBP1-201ENST00000294623 CASC1Q6TDU7 716 aa17.36■□□□□ 0.37
FUBP1-201ENST00000294623 ANKRD7Q92527 254 aa17.36■□□□□ 0.37
FUBP1-201ENST00000294623 ANKRD36BQ8N2N9 1353 aa17.35■□□□□ 0.37
FUBP1-201ENST00000294623 AK9Q5TCS8 1911 aa17.35■□□□□ 0.37
FUBP1-201ENST00000294623 BBXQ8WY36 941 aaPredicted RBP17.35■□□□□ 0.37
FUBP1-201ENST00000294623 ANKRD45Q5TZF3 282 aa17.35■□□□□ 0.37
FUBP1-201ENST00000294623 KIF1BO60333 1816 aa17.34■□□□□ 0.37
FUBP1-201ENST00000294623 VWDEQ8N2E2 1590 aa17.34■□□□□ 0.37
FUBP1-201ENST00000294623 CREBRFQ8IUR6 639 aa17.33■□□□□ 0.37
FUBP1-201ENST00000294623 RBM42Q9BTD8 480 aaKnown RBP17.33■□□□□ 0.37
FUBP1-201ENST00000294623 OGFRQ9NZT2 677 aa17.33■□□□□ 0.37
FUBP1-201ENST00000294623 USP26Q9BXU7 913 aa17.33■□□□□ 0.36
FUBP1-201ENST00000294623 QRICH2Q9H0J4 1663 aa17.33■□□□□ 0.36
FUBP1-201ENST00000294623 GTF2E1P29083 439 aaPredicted RBP17.32■□□□□ 0.36
FUBP1-201ENST00000294623 CBX1P83916 185 aa17.32■□□□□ 0.36
FUBP1-201ENST00000294623 CTIFO43310 598 aaKnown RBP17.32■□□□□ 0.36
FUBP1-201ENST00000294623 MTHFSP49914 203 aa17.32■□□□□ 0.36
FUBP1-201ENST00000294623 JPH4Q96JJ6 628 aa17.32■□□□□ 0.36
FUBP1-201ENST00000294623 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
FUBP1-201ENST00000294623 REC8O95072 547 aa17.31■□□□□ 0.36
FUBP1-201ENST00000294623 BCL2L12Q9HB09 334 aa17.31■□□□□ 0.36
FUBP1-201ENST00000294623 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
FUBP1-201ENST00000294623 INTS4Q96HW7 963 aaKnown RBP17.31■□□□□ 0.36
FUBP1-201ENST00000294623 ZBTB7BO15156 539 aaPredicted RBP17.3■□□□□ 0.36
FUBP1-201ENST00000294623 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
FUBP1-201ENST00000294623 ZDHHC9Q9Y397 364 aa17.3■□□□□ 0.36
FUBP1-201ENST00000294623 CD109Q6YHK3 1445 aa17.3■□□□□ 0.36
FUBP1-201ENST00000294623 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
FUBP1-201ENST00000294623 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
FUBP1-201ENST00000294623 CCDC66A2RUB6 948 aa17.29■□□□□ 0.36
FUBP1-201ENST00000294623 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
FUBP1-201ENST00000294623 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.363e-7■■■□□ 15.7
FUBP1-201ENST00000294623 SLC20A2Q08357 652 aa17.29■□□□□ 0.36
FUBP1-201ENST00000294623 ATP2B3Q16720 1220 aa17.29■□□□□ 0.36
FUBP1-201ENST00000294623 BRD1O95696 1058 aa17.29■□□□□ 0.36
FUBP1-201ENST00000294623 TTC22Q5TAA0 569 aa17.29■□□□□ 0.36
FUBP1-201ENST00000294623 IPO4Q8TEX9 1081 aaKnown RBP17.29■□□□□ 0.36
FUBP1-201ENST00000294623 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
FUBP1-201ENST00000294623 PLEKHF1Q96S99 279 aa17.28■□□□□ 0.36
FUBP1-201ENST00000294623 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
FUBP1-201ENST00000294623 VGFO15240 615 aaPredicted RBP17.28■□□□□ 0.36
FUBP1-201ENST00000294623 TMEM87AQ8NBN3 555 aa17.28■□□□□ 0.36
FUBP1-201ENST00000294623 ABCC1P33527 1531 aa17.27■□□□□ 0.36
FUBP1-201ENST00000294623 GOLGA6L6A8MZA4 724 aa17.27■□□□□ 0.36
FUBP1-201ENST00000294623 TSR2Q969E8 191 aaKnown RBP17.27■□□□□ 0.36
FUBP1-201ENST00000294623 USP25Q9UHP3 1055 aa17.27■□□□□ 0.36
FUBP1-201ENST00000294623 TRIM35Q9UPQ4 493 aa17.27■□□□□ 0.36
FUBP1-201ENST00000294623 ABCA9Q8IUA7 1624 aa17.27■□□□□ 0.35
FUBP1-201ENST00000294623 CUL4AQ13619 759 aa17.26■□□□□ 0.35
FUBP1-201ENST00000294623 ABCC4O15439 1325 aa17.26■□□□□ 0.35
FUBP1-201ENST00000294623 ARID3AQ99856 593 aa17.25■□□□□ 0.35
FUBP1-201ENST00000294623 FANCAO15360 1455 aa17.25■□□□□ 0.35
FUBP1-201ENST00000294623 CCDC183Q5T5S1 534 aa17.25■□□□□ 0.35
FUBP1-201ENST00000294623 PLEKHM2Q8IWE5 1019 aa17.25■□□□□ 0.35
FUBP1-201ENST00000294623 TMEM51Q9NW97 253 aa17.25■□□□□ 0.35
FUBP1-201ENST00000294623 CGNQ9P2M7 1197 aaKnown RBP17.25■□□□□ 0.35
FUBP1-201ENST00000294623 GSPT1P15170 499 aaKnown RBP17.24■□□□□ 0.35
FUBP1-201ENST00000294623 PKP1Q13835 747 aa17.23■□□□□ 0.35
FUBP1-201ENST00000294623 RNF214Q8ND24 703 aa17.23■□□□□ 0.35
FUBP1-201ENST00000294623 KIAA1524Q8TCG1 905 aa17.23■□□□□ 0.35
FUBP1-201ENST00000294623 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
FUBP1-201ENST00000294623 IL17RAQ96F46 866 aa17.23■□□□□ 0.35
FUBP1-201ENST00000294623 ARAP3Q8WWN8 1544 aa17.23■□□□□ 0.35
FUBP1-201ENST00000294623 API5Q9BZZ5 524 aaKnown RBP17.23■□□□□ 0.35
FUBP1-201ENST00000294623 TSPYL1Q9H0U9 437 aa17.23■□□□□ 0.35
FUBP1-201ENST00000294623 DCTPP1Q9H773 170 aa17.23■□□□□ 0.35
FUBP1-201ENST00000294623 EPB41L2O43491 1005 aaKnown RBP17.22■□□□□ 0.35
FUBP1-201ENST00000294623 ANAPC15P60006 121 aa17.22■□□□□ 0.35
FUBP1-201ENST00000294623 ZNF771Q7L3S4 317 aaPredicted RBP17.22■□□□□ 0.35
FUBP1-201ENST00000294623 ADCY5O95622 1261 aa17.21■□□□□ 0.35
FUBP1-201ENST00000294623 ZGPATQ8N5A5 531 aaKnown RBP17.21■□□□□ 0.35
FUBP1-201ENST00000294623 KDM4AO75164 1064 aa17.21■□□□□ 0.35
FUBP1-201ENST00000294623 CFAP70Q5T0N1 1121 aa17.21■□□□□ 0.35
FUBP1-201ENST00000294623 NAP1L2Q9ULW6 460 aaPredicted RBP17.21■□□□□ 0.35
FUBP1-201ENST00000294623 WDR33Q9C0J8 1336 aaKnown RBP17.2■□□□□ 0.34
FUBP1-201ENST00000294623 ERC2O15083 957 aa17.2■□□□□ 0.34
FUBP1-201ENST00000294623 CDK11BP21127 795 aaKnown RBP17.2■□□□□ 0.34
FUBP1-201ENST00000294623 SSH2Q76I76 1423 aa17.2■□□□□ 0.34
FUBP1-201ENST00000294623 MCCP23508 829 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms