RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 NSD2O96028 1365 aa19.57■□□□□ 0.72
SMAD6-201ENST00000288840 SMC5Q8IY18 1101 aa19.57■□□□□ 0.72
SMAD6-201ENST00000288840 MRPL50Q8N5N7 158 aaKnown RBP19.57■□□□□ 0.72
SMAD6-201ENST00000288840 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
SMAD6-201ENST00000288840 MADDQ8WXG6 1647 aa19.57■□□□□ 0.72
SMAD6-201ENST00000288840 INTS3Q68E01 1043 aaKnown RBP19.57■□□□□ 0.72
SMAD6-201ENST00000288840 OTUD7AQ8TE49 926 aaPredicted RBP19.57■□□□□ 0.72
SMAD6-201ENST00000288840 CFAP44Q96MT7 982 aa19.57■□□□□ 0.72
SMAD6-201ENST00000288840 IL1RAPL2Q9NP60 686 aa19.57■□□□□ 0.72
SMAD6-201ENST00000288840 TNPO1Q92973 898 aaKnown RBP19.56■□□□□ 0.72
SMAD6-201ENST00000288840 MEIS3Q99687 375 aa19.56■□□□□ 0.72
SMAD6-201ENST00000288840 SSFA2P28290 1259 aa19.56■□□□□ 0.72
SMAD6-201ENST00000288840 MCCP23508 829 aa19.56■□□□□ 0.72
SMAD6-201ENST00000288840 NEK4P51957 841 aa19.56■□□□□ 0.72
SMAD6-201ENST00000288840 ABCC11Q96J66 1382 aa19.56■□□□□ 0.72
SMAD6-201ENST00000288840 YEATS2Q9ULM3 1422 aa19.56■□□□□ 0.72
SMAD6-201ENST00000288840 K7ELQ4 463 aaPredicted RBP19.55■□□□□ 0.72
SMAD6-201ENST00000288840 ABTB2Q8N961 1025 aa19.55■□□□□ 0.72
SMAD6-201ENST00000288840 YTHDC2Q9H6S0 1430 aaKnown RBP19.54■□□□□ 0.72
SMAD6-201ENST00000288840 CAVIN1Q6NZI2 390 aaKnown RBP19.54■□□□□ 0.72
SMAD6-201ENST00000288840 A0A0G2JS52 829 aa19.54■□□□□ 0.72
SMAD6-201ENST00000288840 ZBTB7BO15156 539 aaPredicted RBP19.54■□□□□ 0.72
SMAD6-201ENST00000288840 XPCQ01831 940 aaPredicted RBP19.53■□□□□ 0.72
SMAD6-201ENST00000288840 ACEP12821 1306 aa19.52■□□□□ 0.72
SMAD6-201ENST00000288840 ZNF692Q9BU19 519 aaPredicted RBP19.52■□□□□ 0.72
SMAD6-201ENST00000288840 PRPF40AO75400 957 aaKnown RBP19.52■□□□□ 0.71
SMAD6-201ENST00000288840 REC8O95072 547 aa19.52■□□□□ 0.71
SMAD6-201ENST00000288840 KIAA1211Q6ZU35 1233 aa19.52■□□□□ 0.71
SMAD6-201ENST00000288840 MPNDQ8N594 471 aa19.52■□□□□ 0.71
SMAD6-201ENST00000288840 EIF4A2Q14240 407 aaKnown RBP19.51■□□□□ 0.71
SMAD6-201ENST00000288840 RNF214Q8ND24 703 aa19.51■□□□□ 0.71
SMAD6-201ENST00000288840 SBNO2Q9Y2G9 1366 aa19.51■□□□□ 0.71
SMAD6-201ENST00000288840 IL16Q14005 1332 aa19.51■□□□□ 0.71
SMAD6-201ENST00000288840 BMP2KLQ5H9B9 411 aa19.51■□□□□ 0.71
SMAD6-201ENST00000288840 DNTTIP2Q5QJE6 756 aaKnown RBP19.51■□□□□ 0.71
SMAD6-201ENST00000288840 MSNP26038 577 aaKnown RBP19.5■□□□□ 0.71
SMAD6-201ENST00000288840 SURF6O75683 361 aaKnown RBP19.5■□□□□ 0.71
SMAD6-201ENST00000288840 XRCC6P12956 609 aaKnown RBP eCLIP19.5■□□□□ 0.71
SMAD6-201ENST00000288840 LARP6Q9BRS8 491 aaKnown RBP19.5■□□□□ 0.71
SMAD6-201ENST00000288840 PPIP5K1Q6PFW1 1433 aa19.5■□□□□ 0.71
SMAD6-201ENST00000288840 TEFQ10587 303 aa19.49■□□□□ 0.71
SMAD6-201ENST00000288840 AIMP1Q12904 312 aaKnown RBP19.49■□□□□ 0.71
SMAD6-201ENST00000288840 UPF3BQ9BZI7 483 aaKnown RBP19.49■□□□□ 0.71
SMAD6-201ENST00000288840 GRPEL1Q9HAV7 217 aa19.49■□□□□ 0.71
SMAD6-201ENST00000288840 NAP1L2Q9ULW6 460 aaPredicted RBP19.49■□□□□ 0.71
SMAD6-201ENST00000288840 UHRF1BP1LA0JNW5 1464 aa19.49■□□□□ 0.71
SMAD6-201ENST00000288840 POGZQ7Z3K3 1410 aa19.49■□□□□ 0.71
SMAD6-201ENST00000288840 IL13P35225 146 aa19.48■□□□□ 0.71
SMAD6-201ENST00000288840 MRE11P49959 708 aa19.48■□□□□ 0.71
SMAD6-201ENST00000288840 ANXA1P04083 346 aa19.48■□□□□ 0.71
SMAD6-201ENST00000288840 GAS2L2Q8NHY3 880 aa19.47■□□□□ 0.71
SMAD6-201ENST00000288840 G2E3Q7L622 706 aa19.47■□□□□ 0.71
SMAD6-201ENST00000288840 UBTFL1P0CB47 393 aaPredicted RBP19.47■□□□□ 0.71
SMAD6-201ENST00000288840 CHMP3Q9Y3E7 222 aa19.47■□□□□ 0.71
SMAD6-201ENST00000288840 SPHKAPQ2M3C7 1700 aa19.47■□□□□ 0.71
SMAD6-201ENST00000288840 DTNBO60941 627 aa19.46■□□□□ 0.71
SMAD6-201ENST00000288840 GNAI2P04899 355 aa19.46■□□□□ 0.71
SMAD6-201ENST00000288840 NUTM1Q86Y26 1132 aa19.46■□□□□ 0.71
SMAD6-201ENST00000288840 ZNF330Q9Y3S2 320 aaPredicted RBP19.46■□□□□ 0.71
SMAD6-201ENST00000288840 MAP3K4Q9Y6R4 1608 aa19.46■□□□□ 0.71
SMAD6-201ENST00000288840 MYOM2P54296 1465 aa19.46■□□□□ 0.71
SMAD6-201ENST00000288840 HDGFL1Q5TGJ6 251 aa19.46■□□□□ 0.71
SMAD6-201ENST00000288840 DDX54Q8TDD1 881 aaKnown RBP19.46■□□□□ 0.71
SMAD6-201ENST00000288840 PSME1Q06323 249 aa19.45■□□□□ 0.7
SMAD6-201ENST00000288840 AMOTL2Q9Y2J4 779 aa19.45■□□□□ 0.7
SMAD6-201ENST00000288840 SDSP20132 328 aa19.45■□□□□ 0.7
SMAD6-201ENST00000288840 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
SMAD6-201ENST00000288840 ABCA6Q8N139 1617 aa19.45■□□□□ 0.7
SMAD6-201ENST00000288840 RABEP1Q15276 862 aa19.44■□□□□ 0.7
SMAD6-201ENST00000288840 PUS7Q96PZ0 661 aaKnown RBP19.44■□□□□ 0.7
SMAD6-201ENST00000288840 TET3O43151 1660 aa19.44■□□□□ 0.7
SMAD6-201ENST00000288840 C9orf78Q9NZ63 289 aaPredicted RBP19.44■□□□□ 0.7
SMAD6-201ENST00000288840 CD2BP2O95400 341 aaKnown RBP19.44■□□□□ 0.7
SMAD6-201ENST00000288840 SKOR2Q2VWA4 1001 aaPredicted RBP19.44■□□□□ 0.7
SMAD6-201ENST00000288840 NASPP49321 788 aaPredicted RBP19.43■□□□□ 0.7
SMAD6-201ENST00000288840 CSB-PGBD3P0DP91 1061 aa19.43■□□□□ 0.7
SMAD6-201ENST00000288840 FGD1P98174 961 aa19.43■□□□□ 0.7
SMAD6-201ENST00000288840 RPAP2Q8IXW5 612 aaPredicted RBP19.43■□□□□ 0.7
SMAD6-201ENST00000288840 FAM43AQ8N2R8 423 aa19.43■□□□□ 0.7
SMAD6-201ENST00000288840 TTC21BQ7Z4L5 1316 aa19.43■□□□□ 0.7
SMAD6-201ENST00000288840 RIMS2Q9UQ26 1411 aa19.43■□□□□ 0.7
SMAD6-201ENST00000288840 KIF1BO60333 1816 aa19.43■□□□□ 0.7
SMAD6-201ENST00000288840 CCDC30Q5VVM6 783 aa19.42■□□□□ 0.7
SMAD6-201ENST00000288840 PLEKHM2Q8IWE5 1019 aa19.42■□□□□ 0.7
SMAD6-201ENST00000288840 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.42■□□□□ 0.7
SMAD6-201ENST00000288840 MTHFSDQ2M296 383 aaKnown RBP19.42■□□□□ 0.7
SMAD6-201ENST00000288840 EFCAB6Q5THR3 1501 aa19.41■□□□□ 0.7
SMAD6-201ENST00000288840 ERC2O15083 957 aa19.41■□□□□ 0.7
SMAD6-201ENST00000288840 CHAMP1Q96JM3 812 aa19.41■□□□□ 0.7
SMAD6-201ENST00000288840 LRRCC1Q9C099 1032 aa19.41■□□□□ 0.7
SMAD6-201ENST00000288840 NUCB2P80303 420 aa19.41■□□□□ 0.7
SMAD6-201ENST00000288840 ESCO1Q5FWF5 840 aa19.41■□□□□ 0.7
SMAD6-201ENST00000288840 LRRFIP2Q9Y608 721 aaKnown RBP19.41■□□□□ 0.7
SMAD6-201ENST00000288840 RNF17Q9BXT8 1623 aaKnown RBP19.4■□□□□ 0.7
SMAD6-201ENST00000288840 TTC22Q5TAA0 569 aa19.4■□□□□ 0.7
SMAD6-201ENST00000288840 SIRT2Q8IXJ6 389 aa19.4■□□□□ 0.7
SMAD6-201ENST00000288840 ANTXR1Q9H6X2 564 aa19.4■□□□□ 0.7
SMAD6-201ENST00000288840 ZGPATQ8N5A5 531 aaKnown RBP19.39■□□□□ 0.69
SMAD6-201ENST00000288840 GDPD2Q9HCC8 539 aa19.39■□□□□ 0.69
SMAD6-201ENST00000288840 ARHGAP45Q92619 1136 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms