RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 OVOS2A0A0J9YW53 1432 aa28.47■■■□□ 2.15
RAB28-201ENST00000288723 OVOS2Q6IE36 1432 aa28.47■■■□□ 2.15
RAB28-201ENST00000288723 USP54Q70EL1 1684 aa28.47■■■□□ 2.15
RAB28-201ENST00000288723 MYOM1P52179 1685 aa28.46■■■□□ 2.15
RAB28-201ENST00000288723 CARD14Q9BXL6 1004 aa28.46■■■□□ 2.15
RAB28-201ENST00000288723 TCP11L2Q8N4U5 519 aa28.45■■■□□ 2.14
RAB28-201ENST00000288723 COG3Q96JB2 828 aa28.45■■■□□ 2.14
RAB28-201ENST00000288723 GGNBP2Q9H3C7 697 aa28.44■■■□□ 2.14
RAB28-201ENST00000288723 FYB1O15117 783 aa28.43■■■□□ 2.14
RAB28-201ENST00000288723 FAM182BQ5T319 152 aa28.43■■■□□ 2.14
RAB28-201ENST00000288723 FBLN1P23142 703 aa28.43■■■□□ 2.14
RAB28-201ENST00000288723 TOM1L2Q6ZVM7 507 aa28.43■■■□□ 2.14
RAB28-201ENST00000288723 CRB1P82279 1406 aa28.42■■■□□ 2.14
RAB28-201ENST00000288723 THSD7AQ9UPZ6 1657 aa28.42■■■□□ 2.14
RAB28-201ENST00000288723 RGPD5Q99666 1765 aa28.41■■■□□ 2.14
RAB28-201ENST00000288723 C11orf95C9JLR9 678 aaPredicted RBP28.41■■■□□ 2.14
RAB28-201ENST00000288723 BARGINQ6ZT62 677 aa28.41■■■□□ 2.14
RAB28-201ENST00000288723 CSB-PGBD3P0DP91 1061 aa28.41■■■□□ 2.14
RAB28-201ENST00000288723 WDR17Q8IZU2 1322 aa28.4■■■□□ 2.14
RAB28-201ENST00000288723 NSD3Q9BZ95 1437 aa28.38■■■□□ 2.13
RAB28-201ENST00000288723 THRAP3Q9Y2W1 955 aaKnown RBP28.38■■■□□ 2.13
RAB28-201ENST00000288723 LTN1O94822 1766 aa28.37■■■□□ 2.13
RAB28-201ENST00000288723 CCDC125Q86Z20 511 aa28.33■■■□□ 2.13
RAB28-201ENST00000288723 MAP3K19Q56UN5 1328 aa28.33■■■□□ 2.13
RAB28-201ENST00000288723 ABCC6O95255 1503 aa28.32■■■□□ 2.12
RAB28-201ENST00000288723 ERBB3P21860 1342 aa28.32■■■□□ 2.12
RAB28-201ENST00000288723 CARD10Q9BWT7 1032 aa28.32■■■□□ 2.12
RAB28-201ENST00000288723 PDE3BQ13370 1112 aa28.31■■■□□ 2.12
RAB28-201ENST00000288723 RRS1Q15050 365 aaKnown RBP28.31■■■□□ 2.12
RAB28-201ENST00000288723 ANKRD24Q8TF21 1146 aa28.31■■■□□ 2.12
RAB28-201ENST00000288723 IP6K1Q92551 441 aa28.31■■■□□ 2.12
RAB28-201ENST00000288723 BLMP54132 1417 aaPredicted RBP28.3■■■□□ 2.12
RAB28-201ENST00000288723 PANK3Q9H999 370 aa28.3■■■□□ 2.12
RAB28-201ENST00000288723 NLRP2Q9NX02 1062 aa28.29■■■□□ 2.12
RAB28-201ENST00000288723 KIF20BQ96Q89 1820 aa28.29■■■□□ 2.12
RAB28-201ENST00000288723 AMPHP49418 695 aa28.29■■■□□ 2.12
RAB28-201ENST00000288723 LTV1Q96GA3 475 aaPredicted RBP28.29■■■□□ 2.12
RAB28-201ENST00000288723 HOXC9P31274 260 aa28.27■■■□□ 2.12
RAB28-201ENST00000288723 DEFB132Q7Z7B7 95 aa28.26■■■□□ 2.11
RAB28-201ENST00000288723 CGNL1Q0VF96 1302 aa28.26■■■□□ 2.11
RAB28-201ENST00000288723 KIF7Q2M1P5 1343 aa28.26■■■□□ 2.11
RAB28-201ENST00000288723 SF3B2Q13435 895 aaKnown RBP28.25■■■□□ 2.11
RAB28-201ENST00000288723 DDB1Q16531 1140 aa28.24■■■□□ 2.11
RAB28-201ENST00000288723 PARP4Q9UKK3 1724 aaKnown RBP28.24■■■□□ 2.11
RAB28-201ENST00000288723 FAM196AQ6ZSG2 479 aa28.23■■■□□ 2.11
RAB28-201ENST00000288723 CCDC7Q96M83 1385 aa28.23■■■□□ 2.11
RAB28-201ENST00000288723 TRIM37O94972 964 aa28.2■■■□□ 2.11
RAB28-201ENST00000288723 DISP2A7MBM2 1401 aa28.2■■■□□ 2.1
RAB28-201ENST00000288723 LRRC37A3O60309 1634 aa28.2■■■□□ 2.1
RAB28-201ENST00000288723 CDCA7Q9BWT1 371 aaPredicted RBP28.2■■■□□ 2.1
RAB28-201ENST00000288723 WNK3Q9BYP7 1800 aa28.18■■■□□ 2.1
RAB28-201ENST00000288723 EMILIN1Q9Y6C2 1016 aa28.18■■■□□ 2.1
RAB28-201ENST00000288723 TNNT2P45379 298 aaPredicted RBP28.17■■■□□ 2.1
RAB28-201ENST00000288723 HSP90AB2PQ58FF8 381 aa28.17■■■□□ 2.1
RAB28-201ENST00000288723 RTL1A6NKG5 1358 aa28.17■■■□□ 2.1
RAB28-201ENST00000288723 EXOC5O00471 708 aa28.15■■■□□ 2.1
RAB28-201ENST00000288723 MARCH10Q8NA82 808 aaPredicted RBP28.15■■■□□ 2.1
RAB28-201ENST00000288723 PPM1GO15355 546 aaPredicted RBP28.15■■■□□ 2.1
RAB28-201ENST00000288723 IL2RBP14784 551 aa28.15■■■□□ 2.1
RAB28-201ENST00000288723 PEAK1Q9H792 1746 aa28.14■■■□□ 2.09
RAB28-201ENST00000288723 BAG6P46379 1132 aa28.13■■■□□ 2.09
RAB28-201ENST00000288723 EN1Q05925 392 aaPredicted RBP28.13■■■□□ 2.09
RAB28-201ENST00000288723 FLT4P35916 1363 aa28.12■■■□□ 2.09
RAB28-201ENST00000288723 KNSTRNQ9Y448 316 aa28.11■■■□□ 2.09
RAB28-201ENST00000288723 RGPD1P0DJD0 1748 aa28.11■■■□□ 2.09
RAB28-201ENST00000288723 OVOS2A0A0G2JMS6 1433 aa28.11■■■□□ 2.09
RAB28-201ENST00000288723 NBPF6Q5VWK0 638 aa28.11■■■□□ 2.09
RAB28-201ENST00000288723 NBPF4Q96M43 638 aa28.11■■■□□ 2.09
RAB28-201ENST00000288723 WASHC2AQ641Q2 1341 aa28.1■■■□□ 2.09
RAB28-201ENST00000288723 INSRP06213 1382 aa28.1■■■□□ 2.09
RAB28-201ENST00000288723 RGPD2P0DJD1 1756 aa28.09■■■□□ 2.09
RAB28-201ENST00000288723 APBA3O96018 575 aa28.09■■■□□ 2.09
RAB28-201ENST00000288723 USHBP1Q8N6Y0 703 aa28.09■■■□□ 2.09
RAB28-201ENST00000288723 POLKQ9UBT6 870 aa28.09■■■□□ 2.09
RAB28-201ENST00000288723 TNS1Q9HBL0 1735 aaKnown RBP28.09■■■□□ 2.09
RAB28-201ENST00000288723 FAM208AQ9UK61 1670 aaKnown RBP28.08■■■□□ 2.09
RAB28-201ENST00000288723 KIF24Q5T7B8 1368 aa28.08■■■□□ 2.09
RAB28-201ENST00000288723 TNS2Q63HR2 1409 aa28.07■■■□□ 2.08
RAB28-201ENST00000288723 SMG6Q86US8 1419 aaKnown RBP28.06■■■□□ 2.08
RAB28-201ENST00000288723 ANKRD26Q9UPS8 1709 aa28.06■■■□□ 2.08
RAB28-201ENST00000288723 PTF1AQ7RTS3 328 aa28.06■■■□□ 2.08
RAB28-201ENST00000288723 MAP2P11137 1827 aaKnown RBP28.05■■■□□ 2.08
RAB28-201ENST00000288723 MORC1Q86VD1 984 aa28.05■■■□□ 2.08
RAB28-201ENST00000288723 NSD2O96028 1365 aa28.04■■■□□ 2.08
RAB28-201ENST00000288723 EZH2Q15910 746 aaKnown RBP28.04■■■□□ 2.08
RAB28-201ENST00000288723 AMER1Q5JTC6 1135 aaPredicted RBP28.03■■■□□ 2.08
RAB28-201ENST00000288723 PER1O15534 1290 aaPredicted RBP28.02■■■□□ 2.08
RAB28-201ENST00000288723 CAMKK2Q96RR4 588 aa28.02■■■□□ 2.08
RAB28-201ENST00000288723 DDX54Q8TDD1 881 aaKnown RBP28.01■■■□□ 2.07
RAB28-201ENST00000288723 MEGF6O75095 1541 aa28■■■□□ 2.07
RAB28-201ENST00000288723 SBF2Q86WG5 1849 aa27.99■■■□□ 2.07
RAB28-201ENST00000288723 ACSBG1Q96GR2 724 aa27.98■■■□□ 2.07
RAB28-201ENST00000288723 BCL11BQ9C0K0 894 aaPredicted RBP27.98■■■□□ 2.07
RAB28-201ENST00000288723 BCL9O00512 1426 aa27.98■■■□□ 2.07
RAB28-201ENST00000288723 KCNQ2O43526 872 aa27.97■■■□□ 2.07
RAB28-201ENST00000288723 CNGB1Q14028 1251 aaPredicted RBP27.97■■■□□ 2.07
RAB28-201ENST00000288723 RAPGEF4Q8WZA2 1011 aa27.97■■■□□ 2.07
RAB28-201ENST00000288723 CC2D1BQ5T0F9 858 aaKnown RBP27.96■■■□□ 2.07
RAB28-201ENST00000288723 ZCRB1Q8TBF4 217 aaKnown RBP27.96■■■□□ 2.07
RAB28-201ENST00000288723 EYA1Q99502 592 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms