RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 NOB1Q9ULX3 412 aaKnown RBP23.24■■□□□ 1.31
LSM11-201ENST00000286307 TEX14Q8IWB6 1497 aa23.24■■□□□ 1.31
LSM11-201ENST00000286307 FKBP4Q02790 459 aaKnown RBP eCLIP23.23■■□□□ 1.31
LSM11-201ENST00000286307 GOLGA6L19H0YKK7 550 aa23.23■■□□□ 1.31
LSM11-201ENST00000286307 BECN2A8MW95 431 aa23.23■■□□□ 1.31
LSM11-201ENST00000286307 CHRNA2Q15822 529 aa23.23■■□□□ 1.31
LSM11-201ENST00000286307 WWC2Q6AWC2 1192 aa23.23■■□□□ 1.31
LSM11-201ENST00000286307 TMOD2Q9NZR1 351 aa23.23■■□□□ 1.31
LSM11-201ENST00000286307 NME9Q86XW9 330 aa23.23■■□□□ 1.31
LSM11-201ENST00000286307 ANKIB1Q9P2G1 1089 aa23.23■■□□□ 1.31
LSM11-201ENST00000286307 SMC3Q9UQE7 1217 aa23.22■■□□□ 1.31
LSM11-201ENST00000286307 RAI14Q9P0K7 980 aa23.22■■□□□ 1.31
LSM11-201ENST00000286307 NBPF8Q3BBV2 869 aa23.21■■□□□ 1.31
LSM11-201ENST00000286307 TPM1P09493 284 aa23.21■■□□□ 1.31
LSM11-201ENST00000286307 BICD2Q8TD16 824 aa23.21■■□□□ 1.31
LSM11-201ENST00000286307 RPGRQ92834 1020 aaKnown RBP23.21■■□□□ 1.31
LSM11-201ENST00000286307 NSD3Q9BZ95 1437 aa23.21■■□□□ 1.31
LSM11-201ENST00000286307 HOOK1Q9UJC3 728 aaKnown RBP23.2■■□□□ 1.3
LSM11-201ENST00000286307 WASLO00401 505 aaPredicted RBP23.19■■□□□ 1.3
LSM11-201ENST00000286307 PCF11O94913 1555 aaKnown RBP23.18■■□□□ 1.3
LSM11-201ENST00000286307 CCT4P50991 539 aaKnown RBP23.18■■□□□ 1.3
LSM11-201ENST00000286307 ASXL2Q76L83 1435 aa23.18■■□□□ 1.3
LSM11-201ENST00000286307 BRD4O60885 1362 aaPredicted RBP23.18■■□□□ 1.3
LSM11-201ENST00000286307 MAP4K4O95819 1239 aaPredicted RBP23.18■■□□□ 1.3
LSM11-201ENST00000286307 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
LSM11-201ENST00000286307 NACAP1Q9BZK3 213 aa23.17■■□□□ 1.3
LSM11-201ENST00000286307 ATP2B1P20020 1258 aa23.17■■□□□ 1.3
LSM11-201ENST00000286307 MCM10Q7L590 875 aa23.17■■□□□ 1.3
LSM11-201ENST00000286307 LRP2BPQ9P2M1 347 aa23.17■■□□□ 1.3
LSM11-201ENST00000286307 ANKRD20A12PQ8NF67 263 aa23.17■■□□□ 1.3
LSM11-201ENST00000286307 MPHOSPH10O00566 681 aaKnown RBP23.16■■□□□ 1.3
LSM11-201ENST00000286307 PSMA5P28066 241 aa23.16■■□□□ 1.3
LSM11-201ENST00000286307 NCKAP5LQ9HCH0 1330 aa23.16■■□□□ 1.3
LSM11-201ENST00000286307 CEP126Q9P2H0 1117 aa23.15■■□□□ 1.3
LSM11-201ENST00000286307 IBSPP21815 317 aaPredicted RBP23.15■■□□□ 1.3
LSM11-201ENST00000286307 ACSBG1Q96GR2 724 aa23.15■■□□□ 1.3
LSM11-201ENST00000286307 ZNF622Q969S3 477 aaKnown RBP eCLIP23.14■■□□□ 1.3
LSM11-201ENST00000286307 CDCA7LQ96GN5 454 aa23.14■■□□□ 1.3
LSM11-201ENST00000286307 AMOTQ4VCS5 1084 aa23.14■■□□□ 1.29
LSM11-201ENST00000286307 ABCF2Q9UG63 623 aa23.14■■□□□ 1.29
LSM11-201ENST00000286307 RFC4P35249 363 aa23.13■■□□□ 1.29
LSM11-201ENST00000286307 LMTK3Q96Q04 1460 aa23.13■■□□□ 1.29
LSM11-201ENST00000286307 ADGRF5Q8IZF2 1346 aa23.13■■□□□ 1.29
LSM11-201ENST00000286307 HIP1O00291 1037 aa23.13■■□□□ 1.29
LSM11-201ENST00000286307 WDHD1O75717 1129 aaPredicted RBP23.13■■□□□ 1.29
LSM11-201ENST00000286307 METTL24Q5JXM2 366 aa23.13■■□□□ 1.29
LSM11-201ENST00000286307 GOLGA6L3A6NEY3 463 aa23.12■■□□□ 1.29
LSM11-201ENST00000286307 DDX49Q9Y6V7 483 aaKnown RBP23.12■■□□□ 1.29
LSM11-201ENST00000286307 CDK5RAP3Q96JB5 506 aa23.12■■□□□ 1.29
LSM11-201ENST00000286307 MYD88Q99836 296 aa23.12■■□□□ 1.29
LSM11-201ENST00000286307 PDE4AP27815 886 aa23.12■■□□□ 1.29
LSM11-201ENST00000286307 AACSQ86V21 672 aa23.11■■□□□ 1.29
LSM11-201ENST00000286307 DCTN1Q14203 1278 aa23.11■■□□□ 1.29
LSM11-201ENST00000286307 CDC45O75419 566 aa23.11■■□□□ 1.29
LSM11-201ENST00000286307 FCHSD2O94868 740 aa23.11■■□□□ 1.29
LSM11-201ENST00000286307 ZSCAN25Q6NSZ9 544 aa23.11■■□□□ 1.29
LSM11-201ENST00000286307 EPS15P42566 896 aa23.1■■□□□ 1.29
LSM11-201ENST00000286307 TDO2P48775 406 aa23.1■■□□□ 1.29
LSM11-201ENST00000286307 TRMT112Q9UI30 125 aaKnown RBP23.1■■□□□ 1.29
LSM11-201ENST00000286307 SRGAP3O43295 1099 aa23.1■■□□□ 1.29
LSM11-201ENST00000286307 NUP133Q8WUM0 1156 aa23.09■■□□□ 1.29
LSM11-201ENST00000286307 NFE2L2Q16236 605 aa23.09■■□□□ 1.29
LSM11-201ENST00000286307 CAVIN4Q5BKX8 364 aa23.09■■□□□ 1.29
LSM11-201ENST00000286307 GPTP24298 496 aa23.09■■□□□ 1.29
LSM11-201ENST00000286307 PTPN23Q9H3S7 1636 aa23.09■■□□□ 1.29
LSM11-201ENST00000286307 NOS1P29475 1434 aa23.09■■□□□ 1.29
LSM11-201ENST00000286307 IDH1O75874 414 aaKnown RBP23.08■■□□□ 1.29
LSM11-201ENST00000286307 MYCNP04198 464 aaPredicted RBP23.08■■□□□ 1.29
LSM11-201ENST00000286307 THUMPD2Q9BTF0 503 aaKnown RBP23.08■■□□□ 1.28
LSM11-201ENST00000286307 LRRCC1Q9C099 1032 aa23.08■■□□□ 1.28
LSM11-201ENST00000286307 DDX11L8A8MPP1 907 aa23.08■■□□□ 1.28
LSM11-201ENST00000286307 IPO9Q96P70 1041 aaKnown RBP23.08■■□□□ 1.28
LSM11-201ENST00000286307 CHMP4BP1P59074 171 aa23.07■■□□□ 1.28
LSM11-201ENST00000286307 CRACR2BQ8N4Y2 399 aaPredicted RBP23.07■■□□□ 1.28
LSM11-201ENST00000286307 ANKRD24Q8TF21 1146 aa23.07■■□□□ 1.28
LSM11-201ENST00000286307 EMILIN1Q9Y6C2 1016 aa23.07■■□□□ 1.28
LSM11-201ENST00000286307 CCDC69A6NI79 296 aa23.07■■□□□ 1.28
LSM11-201ENST00000286307 C6orf229H3BNL8 230 aa23.07■■□□□ 1.28
LSM11-201ENST00000286307 KRT18P05783 430 aaKnown RBP23.07■■□□□ 1.28
LSM11-201ENST00000286307 BCAR3O75815 825 aa23.07■■□□□ 1.28
LSM11-201ENST00000286307 WWC3Q9ULE0 1092 aa23.06■■□□□ 1.28
LSM11-201ENST00000286307 FBXO3Q9UK99 471 aa23.06■■□□□ 1.28
LSM11-201ENST00000286307 CT47A1Q5JQC4 288 aaPredicted RBP23.06■■□□□ 1.28
LSM11-201ENST00000286307 GRM1Q13255 1194 aa23.06■■□□□ 1.28
LSM11-201ENST00000286307 DUSP27Q5VZP5 1158 aa23.05■■□□□ 1.28
LSM11-201ENST00000286307 USP5P45974 858 aa23.05■■□□□ 1.28
LSM11-201ENST00000286307 TAF7Q15545 349 aaPredicted RBP23.05■■□□□ 1.28
LSM11-201ENST00000286307 IPO7O95373 1038 aaKnown RBP23.04■■□□□ 1.28
LSM11-201ENST00000286307 ABCC5O15440 1437 aa23.04■■□□□ 1.28
LSM11-201ENST00000286307 WDR78Q5VTH9 848 aa23.04■■□□□ 1.28
LSM11-201ENST00000286307 CCAR2Q8N163 923 aaKnown RBP23.04■■□□□ 1.28
LSM11-201ENST00000286307 DHX29Q7Z478 1369 aaKnown RBP23.04■■□□□ 1.28
LSM11-201ENST00000286307 SOGA3Q5TF21 947 aa23.04■■□□□ 1.28
LSM11-201ENST00000286307 UNC13AQ9UPW8 1703 aa23.03■■□□□ 1.28
LSM11-201ENST00000286307 ACEP12821 1306 aa23.03■■□□□ 1.28
LSM11-201ENST00000286307 NPHP3Q7Z494 1330 aa23.03■■□□□ 1.28
LSM11-201ENST00000286307 ODF2Q5BJF6 829 aa23.03■■□□□ 1.28
LSM11-201ENST00000286307 CCDC73Q6ZRK6 1079 aa23.03■■□□□ 1.28
LSM11-201ENST00000286307 PIBF1Q8WXW3 757 aa23.03■■□□□ 1.28
LSM11-201ENST00000286307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms