RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SKIDA1Q1XH10 827 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 AEBP1Q8IUX7 1158 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 CABP1Q9NZU7 370 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 SCAPERQ9BY12 1400 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 SIL1Q9H173 461 aa19.53■□□□□ 0.72
SH3RF1-201ENST00000284637 CYB5RLQ6IPT4 315 aa19.53■□□□□ 0.72
SH3RF1-201ENST00000284637 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.72
SH3RF1-201ENST00000284637 FAM177A1Q8N128 213 aaPredicted RBP19.53■□□□□ 0.72
SH3RF1-201ENST00000284637 ERC1Q8IUD2 1116 aa19.52■□□□□ 0.72
SH3RF1-201ENST00000284637 IL1RAPL2Q9NP60 686 aa19.52■□□□□ 0.72
SH3RF1-201ENST00000284637 CCP110O43303 1012 aa19.52■□□□□ 0.72
SH3RF1-201ENST00000284637 FILIP1LQ4L180 1135 aa19.52■□□□□ 0.72
SH3RF1-201ENST00000284637 STK11IPQ8N1F8 1099 aa19.52■□□□□ 0.71
SH3RF1-201ENST00000284637 RRP12Q5JTH9 1297 aaKnown RBP19.51■□□□□ 0.71
SH3RF1-201ENST00000284637 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
SH3RF1-201ENST00000284637 XRCC6P12956 609 aaKnown RBP eCLIP19.51■□□□□ 0.71
SH3RF1-201ENST00000284637 SART3Q15020 963 aaKnown RBP19.51■□□□□ 0.71
SH3RF1-201ENST00000284637 FILIP1Q7Z7B0 1213 aa19.51■□□□□ 0.71
SH3RF1-201ENST00000284637 SRCIN1Q9C0H9 1055 aa19.51■□□□□ 0.71
SH3RF1-201ENST00000284637 ABTB2Q8N961 1025 aa19.5■□□□□ 0.71
SH3RF1-201ENST00000284637 TBC1D2BQ9UPU7 963 aa19.5■□□□□ 0.71
SH3RF1-201ENST00000284637 CT47A1Q5JQC4 288 aaPredicted RBP19.5■□□□□ 0.71
SH3RF1-201ENST00000284637 AXDND1Q5T1B0 1012 aaPredicted RBP19.5■□□□□ 0.71
SH3RF1-201ENST00000284637 CWC27Q6UX04 472 aaKnown RBP19.5■□□□□ 0.71
SH3RF1-201ENST00000284637 EPS15P42566 896 aa19.49■□□□□ 0.71
SH3RF1-201ENST00000284637 SAMD1Q6SPF0 538 aaPredicted RBP19.49■□□□□ 0.71
SH3RF1-201ENST00000284637 SMARCE1Q969G3 411 aa19.49■□□□□ 0.71
SH3RF1-201ENST00000284637 SPATA32Q96LK8 384 aa19.49■□□□□ 0.71
SH3RF1-201ENST00000284637 USP8P40818 1118 aa19.49■□□□□ 0.71
SH3RF1-201ENST00000284637 ANKRD1Q15327 319 aa19.49■□□□□ 0.71
SH3RF1-201ENST00000284637 JAKMIP1Q96N16 626 aaKnown RBP19.49■□□□□ 0.71
SH3RF1-201ENST00000284637 BLOC1S2Q6QNY1 142 aa19.48■□□□□ 0.71
SH3RF1-201ENST00000284637 CDK19Q9BWU1 502 aa19.48■□□□□ 0.71
SH3RF1-201ENST00000284637 NUP62CLQ9H1M0 184 aa19.48■□□□□ 0.71
SH3RF1-201ENST00000284637 PDRG1Q9NUG6 133 aa19.48■□□□□ 0.71
SH3RF1-201ENST00000284637 C9orf84Q5VXU9 1444 aa19.47■□□□□ 0.71
SH3RF1-201ENST00000284637 SRGAP3O43295 1099 aa19.47■□□□□ 0.71
SH3RF1-201ENST00000284637 ARHGAP5Q13017 1502 aa19.47■□□□□ 0.71
SH3RF1-201ENST00000284637 FAM177BA6PVY3 158 aa19.47■□□□□ 0.71
SH3RF1-201ENST00000284637 CCDC43Q96MW1 224 aaKnown RBP19.47■□□□□ 0.71
SH3RF1-201ENST00000284637 TXNDC2Q86VQ3 553 aa19.47■□□□□ 0.71
SH3RF1-201ENST00000284637 JMYQ8N9B5 988 aa19.47■□□□□ 0.71
SH3RF1-201ENST00000284637 TBC1D2Q9BYX2 928 aa19.47■□□□□ 0.71
SH3RF1-201ENST00000284637 EXOC6BQ9Y2D4 811 aa19.47■□□□□ 0.71
SH3RF1-201ENST00000284637 PPP4R3BQ5MIZ7 849 aa19.46■□□□□ 0.71
SH3RF1-201ENST00000284637 UPF3BQ9BZI7 483 aaKnown RBP19.46■□□□□ 0.71
SH3RF1-201ENST00000284637 TMPOP42166 694 aaKnown RBP19.46■□□□□ 0.71
SH3RF1-201ENST00000284637 THUMPD2Q9BTF0 503 aaKnown RBP19.46■□□□□ 0.71
SH3RF1-201ENST00000284637 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
SH3RF1-201ENST00000284637 CTDP1Q9Y5B0 961 aaPredicted RBP19.45■□□□□ 0.7
SH3RF1-201ENST00000284637 DHX8Q14562 1220 aaKnown RBP19.45■□□□□ 0.7
SH3RF1-201ENST00000284637 PLEKHO1Q53GL0 409 aaPredicted RBP19.45■□□□□ 0.7
SH3RF1-201ENST00000284637 FERMT3Q86UX7 667 aa19.45■□□□□ 0.7
SH3RF1-201ENST00000284637 RPAP2Q8IXW5 612 aaPredicted RBP19.45■□□□□ 0.7
SH3RF1-201ENST00000284637 RARSP54136 660 aaKnown RBP19.45■□□□□ 0.7
SH3RF1-201ENST00000284637 AACSQ86V21 672 aa19.45■□□□□ 0.7
SH3RF1-201ENST00000284637 PRIMPOLQ96LW4 560 aa19.45■□□□□ 0.7
SH3RF1-201ENST00000284637 MAGEC2Q9UBF1 373 aaPredicted RBP19.44■□□□□ 0.7
SH3RF1-201ENST00000284637 RRS1Q15050 365 aaKnown RBP19.44■□□□□ 0.7
SH3RF1-201ENST00000284637 CAMK4Q16566 473 aa19.44■□□□□ 0.7
SH3RF1-201ENST00000284637 PPFIBP1Q86W92 1011 aa19.44■□□□□ 0.7
SH3RF1-201ENST00000284637 SSH1Q8WYL5 1049 aa19.44■□□□□ 0.7
SH3RF1-201ENST00000284637 FBXO3Q9UK99 471 aa19.43■□□□□ 0.7
SH3RF1-201ENST00000284637 SSFA2P28290 1259 aa19.43■□□□□ 0.7
SH3RF1-201ENST00000284637 RBM33Q96EV2 1170 aaKnown RBP19.43■□□□□ 0.7
SH3RF1-201ENST00000284637 SMARCA5O60264 1052 aaPredicted RBP19.43■□□□□ 0.7
SH3RF1-201ENST00000284637 NUTM1Q86Y26 1132 aa19.43■□□□□ 0.7
SH3RF1-201ENST00000284637 CEP57L1Q8IYX8 460 aa19.43■□□□□ 0.7
SH3RF1-201ENST00000284637 GTPBP4Q9BZE4 634 aaKnown RBP19.42■□□□□ 0.7
SH3RF1-201ENST00000284637 CCDC158Q5M9N0 1113 aa19.42■□□□□ 0.7
SH3RF1-201ENST00000284637 ZSCAN31Q96LW9 406 aaPredicted RBP19.42■□□□□ 0.7
SH3RF1-201ENST00000284637 TXLNAP40222 546 aa19.42■□□□□ 0.7
SH3RF1-201ENST00000284637 TTC39AQ5SRH9 613 aa19.42■□□□□ 0.7
SH3RF1-201ENST00000284637 ZFYVE27Q5T4F4 411 aa19.42■□□□□ 0.7
SH3RF1-201ENST00000284637 TNPO1Q92973 898 aaKnown RBP19.42■□□□□ 0.7
SH3RF1-201ENST00000284637 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
SH3RF1-201ENST00000284637 PRXQ9BXM0 1461 aa19.42■□□□□ 0.7
SH3RF1-201ENST00000284637 NAIPQ13075 1403 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 FCHSD2O94868 740 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 CASTP20810 708 aaKnown RBP19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 HSP90AB2PQ58FF8 381 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 TIAM1Q13009 1591 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 DDX11Q96FC9 970 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 TIGD1Q96MW7 591 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 PANK2Q9BZ23 570 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 PPP6R1Q9UPN7 881 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 DCTN1Q14203 1278 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 MAP3K11Q16584 847 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 ODF2Q5BJF6 829 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 CFAP45Q9UL16 551 aa19.41■□□□□ 0.7
SH3RF1-201ENST00000284637 EIF3JO75822 258 aaKnown RBP19.4■□□□□ 0.7
SH3RF1-201ENST00000284637 CCDC191Q8NCU4 936 aa19.4■□□□□ 0.7
SH3RF1-201ENST00000284637 SMAP1Q8IYB5 467 aaPredicted RBP19.4■□□□□ 0.7
SH3RF1-201ENST00000284637 ZNHIT6Q9NWK9 470 aaKnown RBP19.4■□□□□ 0.7
SH3RF1-201ENST00000284637 PIP4K2AP48426 406 aaPredicted RBP19.39■□□□□ 0.69
SH3RF1-201ENST00000284637 NFE2L2Q16236 605 aa19.39■□□□□ 0.69
SH3RF1-201ENST00000284637 CCDC83Q8IWF9 413 aa19.39■□□□□ 0.69
SH3RF1-201ENST00000284637 EHBP1L1Q8N3D4 1523 aa19.39■□□□□ 0.69
SH3RF1-201ENST00000284637 FAM69CQ0P6D2 419 aa19.38■□□□□ 0.69
SH3RF1-201ENST00000284637 CNNM1Q9NRU3 951 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms