RNA–Protein interactions for RNA: ENST00000284110.1

HS3ST3A1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST3A1, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-201ENST00000284110 GOLGA2Q08379 1002 aa24.18■■□□□ 1.46
HS3ST3A1-201ENST00000284110 WWC1Q8IX03 1113 aa24.17■■□□□ 1.46
HS3ST3A1-201ENST00000284110 MYCNP04198 464 aaPredicted RBP24.16■■□□□ 1.46
HS3ST3A1-201ENST00000284110 NEUROD2Q15784 382 aa24.16■■□□□ 1.46
HS3ST3A1-201ENST00000284110 ZNF771Q7L3S4 317 aaPredicted RBP24.16■■□□□ 1.46
HS3ST3A1-201ENST00000284110 MTHFSP49914 203 aa24.15■■□□□ 1.46
HS3ST3A1-201ENST00000284110 ZKSCAN5Q9Y2L8 839 aa24.14■■□□□ 1.46
HS3ST3A1-201ENST00000284110 YY1AP1Q9H869 796 aa24.14■■□□□ 1.45
HS3ST3A1-201ENST00000284110 RRP7AQ9Y3A4 280 aaKnown RBP24.14■■□□□ 1.45
HS3ST3A1-201ENST00000284110 MCM5P33992 734 aa24.13■■□□□ 1.45
HS3ST3A1-201ENST00000284110 SPRYD3Q8NCJ5 442 aa24.13■■□□□ 1.45
HS3ST3A1-201ENST00000284110 CGNL1Q0VF96 1302 aa24.12■■□□□ 1.45
HS3ST3A1-201ENST00000284110 JARID2Q92833 1246 aaPredicted RBP24.12■■□□□ 1.45
HS3ST3A1-201ENST00000284110 CLTCQ00610 1675 aaKnown RBP24.12■■□□□ 1.45
HS3ST3A1-201ENST00000284110 ZFYVE9O95405 1425 aa24.11■■□□□ 1.45
HS3ST3A1-201ENST00000284110 SLFN5Q08AF3 891 aa24.11■■□□□ 1.45
HS3ST3A1-201ENST00000284110 SPDYE4A6NLX3 237 aa24.11■■□□□ 1.45
HS3ST3A1-201ENST00000284110 WAPLQ7Z5K2 1190 aa24.11■■□□□ 1.45
HS3ST3A1-201ENST00000284110 GEMIN8Q9NWZ8 242 aaKnown RBP24.11■■□□□ 1.45
HS3ST3A1-201ENST00000284110 TULP2O00295 520 aa24.1■■□□□ 1.45
HS3ST3A1-201ENST00000284110 GTF2F1P35269 517 aaKnown RBP eCLIP24.1■■□□□ 1.45
HS3ST3A1-201ENST00000284110 CHMP4CQ96CF2 233 aa24.1■■□□□ 1.45
HS3ST3A1-201ENST00000284110 GGNBP2Q9H3C7 697 aa24.1■■□□□ 1.45
HS3ST3A1-201ENST00000284110 CAPN2P17655 700 aa24.09■■□□□ 1.45
HS3ST3A1-201ENST00000284110 PDLIM2Q96JY6 352 aa24.09■■□□□ 1.45
HS3ST3A1-201ENST00000284110 TBC1D32Q96NH3 1257 aa24.09■■□□□ 1.45
HS3ST3A1-201ENST00000284110 YTHDC2Q9H6S0 1430 aaKnown RBP24.09■■□□□ 1.45
HS3ST3A1-201ENST00000284110 SKOR2Q2VWA4 1001 aaPredicted RBP24.08■■□□□ 1.45
HS3ST3A1-201ENST00000284110 TSC1Q92574 1164 aa24.08■■□□□ 1.45
HS3ST3A1-201ENST00000284110 POLR3AO14802 1390 aaPredicted RBP24.08■■□□□ 1.45
HS3ST3A1-201ENST00000284110 ANKRD36BQ8N2N9 1353 aa24.08■■□□□ 1.45
HS3ST3A1-201ENST00000284110 PTPRMP28827 1452 aa24.08■■□□□ 1.44
HS3ST3A1-201ENST00000284110 A0A1W2PP64 1363 aa24.08■■□□□ 1.44
HS3ST3A1-201ENST00000284110 TULP1O00294 542 aaPredicted RBP24.07■■□□□ 1.44
HS3ST3A1-201ENST00000284110 APPP05067 770 aa24.07■■□□□ 1.44
HS3ST3A1-201ENST00000284110 HSP90B1P14625 803 aaKnown RBP24.07■■□□□ 1.44
HS3ST3A1-201ENST00000284110 ZNF692Q9BU19 519 aaPredicted RBP24.07■■□□□ 1.44
HS3ST3A1-201ENST00000284110 TRIM6-TRIM34B2RNG4 842 aa24.06■■□□□ 1.44
HS3ST3A1-201ENST00000284110 AXDND1Q5T1B0 1012 aaPredicted RBP24.06■■□□□ 1.44
HS3ST3A1-201ENST00000284110 ZNF622Q969S3 477 aaKnown RBP eCLIP24.06■■□□□ 1.44
HS3ST3A1-201ENST00000284110 ZBTB9Q96C00 473 aa24.06■■□□□ 1.44
HS3ST3A1-201ENST00000284110 TIGD1Q96MW7 591 aa24.06■■□□□ 1.44
HS3ST3A1-201ENST00000284110 TRIM34Q9BYJ4 488 aa24.06■■□□□ 1.44
HS3ST3A1-201ENST00000284110 CDK19Q9BWU1 502 aa24.05■■□□□ 1.44
HS3ST3A1-201ENST00000284110 ALKQ9UM73 1620 aa24.04■■□□□ 1.44
HS3ST3A1-201ENST00000284110 IBTKQ9P2D0 1353 aaPredicted RBP24.04■■□□□ 1.44
HS3ST3A1-201ENST00000284110 CCDC66A2RUB6 948 aa24.04■■□□□ 1.44
HS3ST3A1-201ENST00000284110 BCAR3O75815 825 aa24.03■■□□□ 1.44
HS3ST3A1-201ENST00000284110 FAM193AP78312 1265 aa24.03■■□□□ 1.44
HS3ST3A1-201ENST00000284110 ESF1Q9H501 851 aaKnown RBP24.03■■□□□ 1.44
HS3ST3A1-201ENST00000284110 CABP1Q9NZU7 370 aa24.03■■□□□ 1.44
HS3ST3A1-201ENST00000284110 A2ML1A8K2U0 1454 aa24.02■■□□□ 1.44
HS3ST3A1-201ENST00000284110 TRMT2AQ8IZ69 625 aaKnown RBP24.02■■□□□ 1.44
HS3ST3A1-201ENST00000284110 PRIMPOLQ96LW4 560 aa24.02■■□□□ 1.44
HS3ST3A1-201ENST00000284110 KIF13AQ9H1H9 1805 aa24.01■■□□□ 1.43
HS3ST3A1-201ENST00000284110 GABPB1Q06547 395 aaPredicted RBP24.01■■□□□ 1.43
HS3ST3A1-201ENST00000284110 TCP11L2Q8N4U5 519 aa24.01■■□□□ 1.43
HS3ST3A1-201ENST00000284110 PUS7Q96PZ0 661 aaKnown RBP24.01■■□□□ 1.43
HS3ST3A1-201ENST00000284110 AGLP35573 1532 aa24.01■■□□□ 1.43
HS3ST3A1-201ENST00000284110 FBLN1P23142 703 aa24.01■■□□□ 1.43
HS3ST3A1-201ENST00000284110 RBM25P49756 843 aaKnown RBP24■■□□□ 1.43
HS3ST3A1-201ENST00000284110 SHPRHQ149N8 1683 aa24■■□□□ 1.43
HS3ST3A1-201ENST00000284110 ZMYM3Q14202 1370 aa23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 NINLQ9Y2I6 1382 aa23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 RIMS2Q9UQ26 1411 aa23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 FYB1O15117 783 aa23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 HMGN5P82970 282 aaKnown RBP23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 KIF3AQ9Y496 699 aa23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 U2AF1L5P0DN76 240 aaPredicted RBP23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 U2AF1Q01081 240 aaKnown RBP eCLIP23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 PDCL2Q8N4E4 241 aa23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
HS3ST3A1-201ENST00000284110 UPF2Q9HAU5 1272 aaKnown RBP23.98■■□□□ 1.43
HS3ST3A1-201ENST00000284110 SLFN14P0C7P3 912 aa23.97■■□□□ 1.43
HS3ST3A1-201ENST00000284110 PTMSP20962 102 aa23.97■■□□□ 1.43
HS3ST3A1-201ENST00000284110 TSPYL1Q9H0U9 437 aa23.97■■□□□ 1.43
HS3ST3A1-201ENST00000284110 HSP90AB1P08238 724 aaKnown RBP23.97■■□□□ 1.43
HS3ST3A1-201ENST00000284110 DDIT3P35638 169 aa23.97■■□□□ 1.43
HS3ST3A1-201ENST00000284110 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.97■■□□□ 1.43
HS3ST3A1-201ENST00000284110 RUNDC1Q96C34 613 aa23.97■■□□□ 1.43
HS3ST3A1-201ENST00000284110 U2AF2P26368 475 aaKnown RBP eCLIP23.96■■□□□ 1.43
HS3ST3A1-201ENST00000284110 CFAP53Q96M91 514 aa23.96■■□□□ 1.43
HS3ST3A1-201ENST00000284110 REREQ9P2R6 1566 aa23.96■■□□□ 1.43
HS3ST3A1-201ENST00000284110 TXNDC2Q86VQ3 553 aa23.95■■□□□ 1.43
HS3ST3A1-201ENST00000284110 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.95■■□□□ 1.42
HS3ST3A1-201ENST00000284110 TNPO1Q92973 898 aaKnown RBP23.95■■□□□ 1.42
HS3ST3A1-201ENST00000284110 FEZ1Q99689 392 aa23.95■■□□□ 1.42
HS3ST3A1-201ENST00000284110 CD163L1Q9NR16 1453 aa23.95■■□□□ 1.42
HS3ST3A1-201ENST00000284110 ABCC11Q96J66 1382 aa23.95■■□□□ 1.42
HS3ST3A1-201ENST00000284110 TERF2IPQ9NYB0 399 aa23.94■■□□□ 1.42
HS3ST3A1-201ENST00000284110 U2SURPO15042 1029 aaKnown RBP23.94■■□□□ 1.42
HS3ST3A1-201ENST00000284110 SPATA31D1Q6ZQQ2 1576 aa23.94■■□□□ 1.42
HS3ST3A1-201ENST00000284110 NKTRP30414 1462 aaKnown RBP23.94■■□□□ 1.42
HS3ST3A1-201ENST00000284110 NCKAP5LQ9HCH0 1330 aa23.94■■□□□ 1.42
HS3ST3A1-201ENST00000284110 BCL2L12Q9HB09 334 aa23.93■■□□□ 1.42
HS3ST3A1-201ENST00000284110 GBP4Q96PP9 640 aa23.93■■□□□ 1.42
HS3ST3A1-201ENST00000284110 NCOA3Q9Y6Q9 1424 aa23.93■■□□□ 1.42
HS3ST3A1-201ENST00000284110 METP08581 1390 aa23.93■■□□□ 1.42
HS3ST3A1-201ENST00000284110 ATAD2Q6PL18 1390 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms