RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 U2SURPO15042 1029 aaKnown RBP27.45■■□□□ 1.99
YBX3-202ENST00000279550 PLIN1O60240 522 aa27.45■■□□□ 1.99
YBX3-202ENST00000279550 NEUROD2Q15784 382 aa27.45■■□□□ 1.99
YBX3-202ENST00000279550 USP19O94966 1318 aa27.45■■□□□ 1.98
YBX3-202ENST00000279550 SPATA31A3Q5VYP0 1347 aa27.45■■□□□ 1.98
YBX3-202ENST00000279550 E9PSI1 815 aa27.44■■□□□ 1.98
YBX3-202ENST00000279550 DIAPH1O60610 1272 aaKnown RBP27.44■■□□□ 1.98
YBX3-202ENST00000279550 NHSL1Q5SYE7 1610 aa27.44■■□□□ 1.98
YBX3-202ENST00000279550 KCNH5Q8NCM2 988 aa27.44■■□□□ 1.98
YBX3-202ENST00000279550 EXOC6Q8TAG9 804 aa27.44■■□□□ 1.98
YBX3-202ENST00000279550 SLIT3O75094 1523 aa27.43■■□□□ 1.98
YBX3-202ENST00000279550 NFAT5O94916 1531 aa27.43■■□□□ 1.98
YBX3-202ENST00000279550 ROBO1Q9Y6N7 1651 aa27.42■■□□□ 1.98
YBX3-202ENST00000279550 PEAK1Q9H792 1746 aa27.42■■□□□ 1.98
YBX3-202ENST00000279550 ARHGEF10O15013 1369 aa27.42■■□□□ 1.98
YBX3-202ENST00000279550 PLEKHF1Q96S99 279 aa27.41■■□□□ 1.98
YBX3-202ENST00000279550 GCP02774 474 aa27.4■■□□□ 1.98
YBX3-202ENST00000279550 FLT4P35916 1363 aa27.39■■□□□ 1.98
YBX3-202ENST00000279550 KIF24Q5T7B8 1368 aa27.39■■□□□ 1.97
YBX3-202ENST00000279550 TOM1O60784 492 aa27.38■■□□□ 1.97
YBX3-202ENST00000279550 AMPHP49418 695 aa27.38■■□□□ 1.97
YBX3-202ENST00000279550 CCDC27Q2M243 656 aa27.38■■□□□ 1.97
YBX3-202ENST00000279550 MED1Q15648 1581 aaPredicted RBP27.37■■□□□ 1.97
YBX3-202ENST00000279550 PLEKHG5O94827 1062 aa27.36■■□□□ 1.97
YBX3-202ENST00000279550 IL13P35225 146 aa27.36■■□□□ 1.97
YBX3-202ENST00000279550 HSP90AB2PQ58FF8 381 aa27.36■■□□□ 1.97
YBX3-202ENST00000279550 NCBP3Q53F19 620 aaKnown RBP27.36■■□□□ 1.97
YBX3-202ENST00000279550 CCDC136Q96JN2 1154 aa27.36■■□□□ 1.97
YBX3-202ENST00000279550 WDR63Q8IWG1 891 aa27.34■■□□□ 1.97
YBX3-202ENST00000279550 RTL1A6NKG5 1358 aa27.34■■□□□ 1.97
YBX3-202ENST00000279550 AHDC1Q5TGY3 1603 aaPredicted RBP27.34■■□□□ 1.97
YBX3-202ENST00000279550 HOXC9P31274 260 aa27.33■■□□□ 1.97
YBX3-202ENST00000279550 C20orf194Q5TEA3 1177 aa27.33■■□□□ 1.97
YBX3-202ENST00000279550 LTN1O94822 1766 aa27.33■■□□□ 1.97
YBX3-202ENST00000279550 EIF4A2Q14240 407 aaKnown RBP27.33■■□□□ 1.96
YBX3-202ENST00000279550 CRBNQ96SW2 442 aa27.32■■□□□ 1.96
YBX3-202ENST00000279550 PHRF1Q9P1Y6 1649 aaKnown RBP27.31■■□□□ 1.96
YBX3-202ENST00000279550 ARHGEF25Q86VW2 580 aa27.31■■□□□ 1.96
YBX3-202ENST00000279550 TMPOP42166 694 aaKnown RBP27.3■■□□□ 1.96
YBX3-202ENST00000279550 CRYBG1Q9Y4K1 1723 aa27.3■■□□□ 1.96
YBX3-202ENST00000279550 CABLES1Q8TDN4 633 aa27.3■■□□□ 1.96
YBX3-202ENST00000279550 MAPK8IP3Q9UPT6 1336 aa27.29■■□□□ 1.96
YBX3-202ENST00000279550 UBAP1LF5GYI3 381 aa27.29■■□□□ 1.96
YBX3-202ENST00000279550 IP6K1Q92551 441 aa27.29■■□□□ 1.96
YBX3-202ENST00000279550 PIP4K2BP78356 416 aa27.28■■□□□ 1.96
YBX3-202ENST00000279550 CERKQ8TCT0 537 aa27.28■■□□□ 1.96
YBX3-202ENST00000279550 RSPH6AQ9H0K4 717 aa27.28■■□□□ 1.96
YBX3-202ENST00000279550 TRIM35Q9UPQ4 493 aa27.27■■□□□ 1.96
YBX3-202ENST00000279550 ZBTB7CA1YPR0 619 aa27.26■■□□□ 1.95
YBX3-202ENST00000279550 BCAR3O75815 825 aa27.26■■□□□ 1.95
YBX3-202ENST00000279550 FCHSD2O94868 740 aa27.26■■□□□ 1.95
YBX3-202ENST00000279550 LRRC59Q96AG4 307 aaKnown RBP27.26■■□□□ 1.95
YBX3-202ENST00000279550 ZC3H6P61129 1189 aaKnown RBP27.25■■□□□ 1.95
YBX3-202ENST00000279550 PRKAR2BP31323 418 aa27.24■■□□□ 1.95
YBX3-202ENST00000279550 PNNQ9H307 717 aaKnown RBP27.24■■□□□ 1.95
YBX3-202ENST00000279550 HMOX1P09601 288 aa27.23■■□□□ 1.95
YBX3-202ENST00000279550 RGPD1P0DJD0 1748 aa27.23■■□□□ 1.95
YBX3-202ENST00000279550 CPDO75976 1380 aa27.21■■□□□ 1.95
YBX3-202ENST00000279550 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.21■■□□□ 1.95
YBX3-202ENST00000279550 PHLPP1O60346 1717 aa27.2■■□□□ 1.94
YBX3-202ENST00000279550 RIPK4P57078 832 aa27.2■■□□□ 1.94
YBX3-202ENST00000279550 ABCA3Q99758 1704 aa27.19■■□□□ 1.94
YBX3-202ENST00000279550 COL16A1Q07092 1604 aaPredicted RBP27.19■■□□□ 1.94
YBX3-202ENST00000279550 LTV1Q96GA3 475 aaPredicted RBP27.19■■□□□ 1.94
YBX3-202ENST00000279550 PHACTR3Q96KR7 559 aa27.19■■□□□ 1.94
YBX3-202ENST00000279550 MYH16Q9H6N6 1097 aa27.19■■□□□ 1.94
YBX3-202ENST00000279550 KIAA0232Q92628 1395 aa27.18■■□□□ 1.94
YBX3-202ENST00000279550 SULT6B1Q6IMI4 303 aa27.18■■□□□ 1.94
YBX3-202ENST00000279550 EYA1Q99502 592 aa27.18■■□□□ 1.94
YBX3-202ENST00000279550 AXIN2Q9Y2T1 843 aa27.18■■□□□ 1.94
YBX3-202ENST00000279550 IGSF1Q8N6C5 1336 aa27.18■■□□□ 1.94
YBX3-202ENST00000279550 HAP1P54257 671 aaPredicted RBP27.17■■□□□ 1.94
YBX3-202ENST00000279550 AEBP1Q8IUX7 1158 aa27.16■■□□□ 1.94
YBX3-202ENST00000279550 ABCC6O95255 1503 aa27.16■■□□□ 1.94
YBX3-202ENST00000279550 TSR2Q969E8 191 aaKnown RBP27.16■■□□□ 1.94
YBX3-202ENST00000279550 FANCIQ9NVI1 1328 aa27.16■■□□□ 1.94
YBX3-202ENST00000279550 RARSP54136 660 aaKnown RBP27.15■■□□□ 1.94
YBX3-202ENST00000279550 NEFMP07197 916 aa27.14■■□□□ 1.94
YBX3-202ENST00000279550 KDRP35968 1356 aa27.14■■□□□ 1.94
YBX3-202ENST00000279550 IL16Q14005 1332 aa27.14■■□□□ 1.94
YBX3-202ENST00000279550 COL18A1P39060 1754 aa27.14■■□□□ 1.93
YBX3-202ENST00000279550 COL22A1Q8NFW1 1626 aaPredicted RBP27.14■■□□□ 1.93
YBX3-202ENST00000279550 NFE2L2Q16236 605 aa27.13■■□□□ 1.93
YBX3-202ENST00000279550 CHRNA2Q15822 529 aa27.13■■□□□ 1.93
YBX3-202ENST00000279550 ANKRD24Q8TF21 1146 aa27.12■■□□□ 1.93
YBX3-202ENST00000279550 ERBB3P21860 1342 aa27.11■■□□□ 1.93
YBX3-202ENST00000279550 PRDM11Q9NQV5 511 aa27.11■■□□□ 1.93
YBX3-202ENST00000279550 RBM19Q9Y4C8 960 aaKnown RBP27.11■■□□□ 1.93
YBX3-202ENST00000279550 RGPD5Q99666 1765 aa27.09■■□□□ 1.93
YBX3-202ENST00000279550 NBPF6Q5VWK0 638 aa27.09■■□□□ 1.93
YBX3-202ENST00000279550 NBPF4Q96M43 638 aa27.09■■□□□ 1.93
YBX3-202ENST00000279550 EXOSC9Q06265 439 aaKnown RBP27.08■■□□□ 1.93
YBX3-202ENST00000279550 DLG5Q8TDM6 1919 aa27.05■■□□□ 1.92
YBX3-202ENST00000279550 USHBP1Q8N6Y0 703 aa27.05■■□□□ 1.92
YBX3-202ENST00000279550 BCL2L13Q9BXK5 485 aa27.05■■□□□ 1.92
YBX3-202ENST00000279550 LMO7Q8WWI1 1683 aa27.05■■□□□ 1.92
YBX3-202ENST00000279550 THUMPD2Q9BTF0 503 aaKnown RBP27.04■■□□□ 1.92
YBX3-202ENST00000279550 NCAPD2Q15021 1401 aa27.04■■□□□ 1.92
YBX3-202ENST00000279550 PDE3AQ14432 1141 aa27.04■■□□□ 1.92
YBX3-202ENST00000279550 RGPD2P0DJD1 1756 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms