RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 ABTB2Q8N961 1025 aa15.9■□□□□ 0.14
SDE2-201ENST00000272091 PHRF1Q9P1Y6 1649 aaKnown RBP15.9■□□□□ 0.14
SDE2-201ENST00000272091 PAK3O75914 559 aaPredicted RBP15.9■□□□□ 0.14
SDE2-201ENST00000272091 MAPK8IP3Q9UPT6 1336 aa15.89■□□□□ 0.13
SDE2-201ENST00000272091 SLIT3O75094 1523 aa15.89■□□□□ 0.13
SDE2-201ENST00000272091 FLT4P35916 1363 aa15.89■□□□□ 0.13
SDE2-201ENST00000272091 AEBP1Q8IUX7 1158 aa15.88■□□□□ 0.13
SDE2-201ENST00000272091 FOXO3O43524 673 aa15.88■□□□□ 0.13
SDE2-201ENST00000272091 PLIN1O60240 522 aa15.88■□□□□ 0.13
SDE2-201ENST00000272091 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
SDE2-201ENST00000272091 PSME1Q06323 249 aa15.88■□□□□ 0.13
SDE2-201ENST00000272091 PPP4R2Q9NY27 417 aa15.87■□□□□ 0.13
SDE2-201ENST00000272091 RIPK4P57078 832 aa15.86■□□□□ 0.13
SDE2-201ENST00000272091 PNNQ9H307 717 aaKnown RBP15.86■□□□□ 0.13
SDE2-201ENST00000272091 ZNF335Q9H4Z2 1342 aaPredicted RBP15.86■□□□□ 0.13
SDE2-201ENST00000272091 KIF24Q5T7B8 1368 aa15.85■□□□□ 0.13
SDE2-201ENST00000272091 ARHGEF10O15013 1369 aa15.85■□□□□ 0.13
SDE2-201ENST00000272091 HOXC9P31274 260 aa15.85■□□□□ 0.13
SDE2-201ENST00000272091 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
SDE2-201ENST00000272091 MED1Q15648 1581 aaPredicted RBP15.84■□□□□ 0.13
SDE2-201ENST00000272091 CRYBG1Q9Y4K1 1723 aa15.84■□□□□ 0.13
SDE2-201ENST00000272091 RGPD2P0DJD1 1756 aa15.84■□□□□ 0.13
SDE2-201ENST00000272091 ATF3P18847 181 aa15.83■□□□□ 0.13
SDE2-201ENST00000272091 C20orf194Q5TEA3 1177 aa15.83■□□□□ 0.13
SDE2-201ENST00000272091 SULT6B1Q6IMI4 303 aa15.83■□□□□ 0.13
SDE2-201ENST00000272091 RTL1A6NKG5 1358 aa15.83■□□□□ 0.12
SDE2-201ENST00000272091 KDRP35968 1356 aa15.83■□□□□ 0.12
SDE2-201ENST00000272091 EXOC6Q8TAG9 804 aa15.83■□□□□ 0.12
SDE2-201ENST00000272091 DDX17Q92841 729 aaKnown RBP15.83■□□□□ 0.12
SDE2-201ENST00000272091 USP19O94966 1318 aa15.82■□□□□ 0.12
SDE2-201ENST00000272091 FANCIQ9NVI1 1328 aa15.82■□□□□ 0.12
SDE2-201ENST00000272091 PXDNQ92626 1479 aa15.82■□□□□ 0.12
SDE2-201ENST00000272091 KRT28Q7Z3Y7 464 aa15.82■□□□□ 0.12
SDE2-201ENST00000272091 IL16Q14005 1332 aa15.82■□□□□ 0.12
SDE2-201ENST00000272091 MSH6P52701 1360 aa15.82■□□□□ 0.12
SDE2-201ENST00000272091 BCAR3O75815 825 aa15.82■□□□□ 0.12
SDE2-201ENST00000272091 AMPHP49418 695 aa15.82■□□□□ 0.12
SDE2-201ENST00000272091 IGSF1Q8N6C5 1336 aa15.82■□□□□ 0.12
SDE2-201ENST00000272091 TSR2Q969E8 191 aaKnown RBP15.82■□□□□ 0.12
SDE2-201ENST00000272091 B4GALNT3Q6L9W6 998 aa15.81■□□□□ 0.12
SDE2-201ENST00000272091 EYA1Q99502 592 aa15.81■□□□□ 0.12
SDE2-201ENST00000272091 CADPS2Q86UW7 1296 aa15.8■□□□□ 0.12
SDE2-201ENST00000272091 RGPD5Q99666 1765 aa15.8■□□□□ 0.12
SDE2-201ENST00000272091 THUMPD2Q9BTF0 503 aaKnown RBP15.79■□□□□ 0.12
SDE2-201ENST00000272091 MYH16Q9H6N6 1097 aa15.79■□□□□ 0.12
SDE2-201ENST00000272091 CAMTA1Q9Y6Y1 1673 aa15.78■□□□□ 0.12
SDE2-201ENST00000272091 CRBNQ96SW2 442 aa15.78■□□□□ 0.12
SDE2-201ENST00000272091 RARSP54136 660 aaKnown RBP15.77■□□□□ 0.12
SDE2-201ENST00000272091 FAM83GA6ND36 823 aa15.77■□□□□ 0.12
SDE2-201ENST00000272091 IP6K1Q92551 441 aa15.77■□□□□ 0.12
SDE2-201ENST00000272091 GCP02774 474 aa15.77■□□□□ 0.11
SDE2-201ENST00000272091 KCNH5Q8NCM2 988 aa15.77■□□□□ 0.11
SDE2-201ENST00000272091 COL18A1P39060 1754 aa15.76■□□□□ 0.11
SDE2-201ENST00000272091 NEFMP07197 916 aa15.76■□□□□ 0.11
SDE2-201ENST00000272091 EXOSC9Q06265 439 aaKnown RBP15.76■□□□□ 0.11
SDE2-201ENST00000272091 LRRC37A3O60309 1634 aa15.76■□□□□ 0.11
SDE2-201ENST00000272091 ZNF853P0CG23 659 aa15.76■□□□□ 0.11
SDE2-201ENST00000272091 ARHGEF25Q86VW2 580 aa15.76■□□□□ 0.11
SDE2-201ENST00000272091 TNS3Q68CZ2 1445 aa15.75■□□□□ 0.11
SDE2-201ENST00000272091 BRINP3Q76B58 766 aa15.75■□□□□ 0.11
SDE2-201ENST00000272091 DCTN1Q14203 1278 aa15.74■□□□□ 0.11
SDE2-201ENST00000272091 LMO7Q8WWI1 1683 aa15.74■□□□□ 0.11
SDE2-201ENST00000272091 LTV1Q96GA3 475 aaPredicted RBP15.73■□□□□ 0.11
SDE2-201ENST00000272091 NCAPD2Q15021 1401 aa15.73■□□□□ 0.11
SDE2-201ENST00000272091 NPHP3Q7Z494 1330 aa15.73■□□□□ 0.11
SDE2-201ENST00000272091 MTHFSDQ2M296 383 aaKnown RBP15.73■□□□□ 0.11
SDE2-201ENST00000272091 LMOD2Q6P5Q4 547 aa15.73■□□□□ 0.11
SDE2-201ENST00000272091 NHSL1Q5SYE7 1610 aa15.73■□□□□ 0.11
SDE2-201ENST00000272091 ABCA3Q99758 1704 aa15.72■□□□□ 0.11
SDE2-201ENST00000272091 PLEKHG5O94827 1062 aa15.72■□□□□ 0.11
SDE2-201ENST00000272091 IFT57Q9NWB7 429 aa15.72■□□□□ 0.11
SDE2-201ENST00000272091 USHBP1Q8N6Y0 703 aa15.71■□□□□ 0.11
SDE2-201ENST00000272091 CRB1P82279 1406 aa15.71■□□□□ 0.11
SDE2-201ENST00000272091 BCL2L13Q9BXK5 485 aa15.71■□□□□ 0.11
SDE2-201ENST00000272091 AXIN2Q9Y2T1 843 aa15.71■□□□□ 0.11
SDE2-201ENST00000272091 SPATA31A3Q5VYP0 1347 aa15.71■□□□□ 0.11
SDE2-201ENST00000272091 LMOD3Q0VAK6 560 aa15.71■□□□□ 0.11
SDE2-201ENST00000272091 NBPF6Q5VWK0 638 aa15.71■□□□□ 0.11
SDE2-201ENST00000272091 NBPF4Q96M43 638 aa15.71■□□□□ 0.11
SDE2-201ENST00000272091 MBIPQ9NS73 344 aa15.71■□□□□ 0.11
SDE2-201ENST00000272091 TNNQ9UQP3 1299 aa15.71■□□□□ 0.11
SDE2-201ENST00000272091 CT47B1P0C2W7 299 aaPredicted RBP15.7■□□□□ 0.1
SDE2-201ENST00000272091 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.7■□□□□ 0.1
SDE2-201ENST00000272091 SLAIN2Q9P270 581 aa15.7■□□□□ 0.1
SDE2-201ENST00000272091 ZBTB7CA1YPR0 619 aa15.7■□□□□ 0.1
SDE2-201ENST00000272091 CCDC136Q96JN2 1154 aa15.7■□□□□ 0.1
SDE2-201ENST00000272091 MCM10Q7L590 875 aa15.69■□□□□ 0.1
SDE2-201ENST00000272091 LAS1LQ9Y4W2 734 aaKnown RBP15.69■□□□□ 0.1
SDE2-201ENST00000272091 FAM208AQ9UK61 1670 aaKnown RBP15.69■□□□□ 0.1
SDE2-201ENST00000272091 LRRC59Q96AG4 307 aaKnown RBP15.69■□□□□ 0.1
SDE2-201ENST00000272091 CFAP44Q96MT7 982 aa15.69■□□□□ 0.1
SDE2-201ENST00000272091 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
SDE2-201ENST00000272091 GNAI1P63096 354 aa15.68■□□□□ 0.1
SDE2-201ENST00000272091 CALD1Q05682 793 aaKnown RBP15.68■□□□□ 0.1
SDE2-201ENST00000272091 TSPYL6Q8N831 410 aa15.68■□□□□ 0.1
SDE2-201ENST00000272091 CABLES1Q8TDN4 633 aa15.68■□□□□ 0.1
SDE2-201ENST00000272091 SSH1Q8WYL5 1049 aa15.68■□□□□ 0.1
SDE2-201ENST00000272091 SOS2Q07890 1332 aaPredicted RBP15.67■□□□□ 0.1
SDE2-201ENST00000272091 VIRMAQ69YN4 1812 aaKnown RBP15.67■□□□□ 0.1
SDE2-201ENST00000272091 RLBP1P12271 317 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms