RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 SLC12A5Q9H2X9 1139 aa24.77■■□□□ 1.56
CSNK1D-201ENST00000269361 AKAP12Q02952 1782 aa24.76■■□□□ 1.55
CSNK1D-201ENST00000269361 DDB1Q16531 1140 aa24.76■■□□□ 1.55
CSNK1D-201ENST00000269361 HDGFL2Q7Z4V5 671 aaPredicted RBP24.76■■□□□ 1.55
CSNK1D-201ENST00000269361 PUS7Q96PZ0 661 aaKnown RBP24.76■■□□□ 1.55
CSNK1D-201ENST00000269361 USP31Q70CQ4 1352 aa24.76■■□□□ 1.55
CSNK1D-201ENST00000269361 CD163L1Q9NR16 1453 aa24.76■■□□□ 1.55
CSNK1D-201ENST00000269361 COL18A1P39060 1754 aa24.75■■□□□ 1.55
CSNK1D-201ENST00000269361 CSB-PGBD3P0DP91 1061 aa24.75■■□□□ 1.55
CSNK1D-201ENST00000269361 NME9Q86XW9 330 aa24.75■■□□□ 1.55
CSNK1D-201ENST00000269361 CDCA7Q9BWT1 371 aaPredicted RBP24.74■■□□□ 1.55
CSNK1D-201ENST00000269361 CARD10Q9BWT7 1032 aa24.74■■□□□ 1.55
CSNK1D-201ENST00000269361 TERF2IPQ9NYB0 399 aa24.73■■□□□ 1.55
CSNK1D-201ENST00000269361 PARP4Q9UKK3 1724 aaKnown RBP24.72■■□□□ 1.55
CSNK1D-201ENST00000269361 NFAT5O94916 1531 aa24.72■■□□□ 1.55
CSNK1D-201ENST00000269361 OVOS2A0A0G2JMS6 1433 aa24.71■■□□□ 1.55
CSNK1D-201ENST00000269361 OVOS2A0A0J9YW53 1432 aa24.71■■□□□ 1.55
CSNK1D-201ENST00000269361 OVOS2Q6IE36 1432 aa24.71■■□□□ 1.55
CSNK1D-201ENST00000269361 TESK2Q96S53 571 aa24.71■■□□□ 1.55
CSNK1D-201ENST00000269361 ST20-MTHFSA0A0A6YYL1 179 aa24.7■■□□□ 1.54
CSNK1D-201ENST00000269361 MON2Q7Z3U7 1717 aa24.69■■□□□ 1.54
CSNK1D-201ENST00000269361 EDC4Q6P2E9 1401 aaKnown RBP24.69■■□□□ 1.54
CSNK1D-201ENST00000269361 LRP5O75197 1615 aa24.68■■□□□ 1.54
CSNK1D-201ENST00000269361 MARCH10Q8NA82 808 aaPredicted RBP24.68■■□□□ 1.54
CSNK1D-201ENST00000269361 A0A1W2PP64 1363 aa24.67■■□□□ 1.54
CSNK1D-201ENST00000269361 SLC24A1O60721 1099 aa24.67■■□□□ 1.54
CSNK1D-201ENST00000269361 NBPF14Q5TI25 921 aa24.67■■□□□ 1.54
CSNK1D-201ENST00000269361 CCDC7Q96M83 1385 aa24.66■■□□□ 1.54
CSNK1D-201ENST00000269361 LRRC37A3O60309 1634 aa24.65■■□□□ 1.54
CSNK1D-201ENST00000269361 EXOC5O00471 708 aa24.65■■□□□ 1.54
CSNK1D-201ENST00000269361 BCL11BQ9C0K0 894 aaPredicted RBP24.65■■□□□ 1.54
CSNK1D-201ENST00000269361 ABCC6O95255 1503 aa24.65■■□□□ 1.54
CSNK1D-201ENST00000269361 PEAK1Q9H792 1746 aa24.64■■□□□ 1.54
CSNK1D-201ENST00000269361 PLSCR1O15162 318 aa24.63■■□□□ 1.53
CSNK1D-201ENST00000269361 PTF1AQ7RTS3 328 aa24.63■■□□□ 1.53
CSNK1D-201ENST00000269361 NINLQ9Y2I6 1382 aa24.63■■□□□ 1.53
CSNK1D-201ENST00000269361 ERBB3P21860 1342 aa24.62■■□□□ 1.53
CSNK1D-201ENST00000269361 BCL9O00512 1426 aa24.62■■□□□ 1.53
CSNK1D-201ENST00000269361 NLRP2Q9NX02 1062 aa24.62■■□□□ 1.53
CSNK1D-201ENST00000269361 ANKRD24Q8TF21 1146 aa24.6■■□□□ 1.53
CSNK1D-201ENST00000269361 USP54Q70EL1 1684 aa24.59■■□□□ 1.53
CSNK1D-201ENST00000269361 RREB1Q92766 1687 aa24.59■■□□□ 1.53
CSNK1D-201ENST00000269361 RGPD5Q99666 1765 aa24.58■■□□□ 1.53
CSNK1D-201ENST00000269361 IL2RBP14784 551 aa24.56■■□□□ 1.52
CSNK1D-201ENST00000269361 IP6K1Q92551 441 aa24.56■■□□□ 1.52
CSNK1D-201ENST00000269361 NUP188Q5SRE5 1749 aa24.55■■□□□ 1.52
CSNK1D-201ENST00000269361 TMF1P82094 1093 aa24.55■■□□□ 1.52
CSNK1D-201ENST00000269361 COG3Q96JB2 828 aa24.55■■□□□ 1.52
CSNK1D-201ENST00000269361 USP47Q96K76 1375 aa24.54■■□□□ 1.52
CSNK1D-201ENST00000269361 WNK3Q9BYP7 1800 aa24.54■■□□□ 1.52
CSNK1D-201ENST00000269361 TNS2Q63HR2 1409 aa24.54■■□□□ 1.52
CSNK1D-201ENST00000269361 PROM2Q8N271 834 aa24.54■■□□□ 1.52
CSNK1D-201ENST00000269361 ANKRD36BQ8N2N9 1353 aa24.52■■□□□ 1.52
CSNK1D-201ENST00000269361 KCNQ2O43526 872 aa24.51■■□□□ 1.51
CSNK1D-201ENST00000269361 LTV1Q96GA3 475 aaPredicted RBP24.5■■□□□ 1.51
CSNK1D-201ENST00000269361 SBF2Q86WG5 1849 aa24.49■■□□□ 1.51
CSNK1D-201ENST00000269361 FBLN1P23142 703 aa24.49■■□□□ 1.51
CSNK1D-201ENST00000269361 ANO8Q9HCE9 1232 aaPredicted RBP24.49■■□□□ 1.51
CSNK1D-201ENST00000269361 MAP3K19Q56UN5 1328 aa24.49■■□□□ 1.51
CSNK1D-201ENST00000269361 LTN1O94822 1766 aa24.48■■□□□ 1.51
CSNK1D-201ENST00000269361 TXNRD1Q16881 649 aa24.48■■□□□ 1.51
CSNK1D-201ENST00000269361 ACSBG1Q96GR2 724 aa24.48■■□□□ 1.51
CSNK1D-201ENST00000269361 SPON1Q9HCB6 807 aa24.48■■□□□ 1.51
CSNK1D-201ENST00000269361 TIMELESSQ9UNS1 1208 aa24.48■■□□□ 1.51
CSNK1D-201ENST00000269361 RGPD3A6NKT7 1758 aaPredicted RBP24.47■■□□□ 1.51
CSNK1D-201ENST00000269361 RGPD4Q7Z3J3 1758 aa24.47■■□□□ 1.51
CSNK1D-201ENST00000269361 HOXC9P31274 260 aa24.47■■□□□ 1.51
CSNK1D-201ENST00000269361 AMPHP49418 695 aa24.47■■□□□ 1.51
CSNK1D-201ENST00000269361 CDCA8Q53HL2 280 aa24.47■■□□□ 1.51
CSNK1D-201ENST00000269361 FYB1O15117 783 aa24.46■■□□□ 1.51
CSNK1D-201ENST00000269361 GGNBP2Q9H3C7 697 aa24.44■■□□□ 1.5
CSNK1D-201ENST00000269361 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
CSNK1D-201ENST00000269361 STK32BQ9NY57 414 aa24.42■■□□□ 1.5
CSNK1D-201ENST00000269361 CLSPNQ9HAW4 1339 aa24.41■■□□□ 1.5
CSNK1D-201ENST00000269361 RRS1Q15050 365 aaKnown RBP24.41■■□□□ 1.5
CSNK1D-201ENST00000269361 DDX54Q8TDD1 881 aaKnown RBP24.41■■□□□ 1.5
CSNK1D-201ENST00000269361 PPP1R1BQ9UD71 204 aaPredicted RBP24.41■■□□□ 1.5
CSNK1D-201ENST00000269361 PDGFDQ9GZP0 370 aaPredicted RBP24.4■■□□□ 1.5
CSNK1D-201ENST00000269361 SLC15A2Q16348 729 aa24.39■■□□□ 1.49
CSNK1D-201ENST00000269361 RTL1A6NKG5 1358 aa24.39■■□□□ 1.49
CSNK1D-201ENST00000269361 NHSQ6T4R5 1651 aa24.37■■□□□ 1.49
CSNK1D-201ENST00000269361 CARD14Q9BXL6 1004 aa24.36■■□□□ 1.49
CSNK1D-201ENST00000269361 ZBTB7AO95365 584 aa24.35■■□□□ 1.49
CSNK1D-201ENST00000269361 NBPF6Q5VWK0 638 aa24.35■■□□□ 1.49
CSNK1D-201ENST00000269361 ZCRB1Q8TBF4 217 aaKnown RBP24.35■■□□□ 1.49
CSNK1D-201ENST00000269361 NBPF4Q96M43 638 aa24.35■■□□□ 1.49
CSNK1D-201ENST00000269361 FAM208AQ9UK61 1670 aaKnown RBP24.33■■□□□ 1.49
CSNK1D-201ENST00000269361 HSP90AB2PQ58FF8 381 aa24.32■■□□□ 1.48
CSNK1D-201ENST00000269361 PRIM1P49642 420 aaKnown RBP24.31■■□□□ 1.48
CSNK1D-201ENST00000269361 ATF5Q9Y2D1 282 aaPredicted RBP24.31■■□□□ 1.48
CSNK1D-201ENST00000269361 SMG6Q86US8 1419 aaKnown RBP24.3■■□□□ 1.48
CSNK1D-201ENST00000269361 CASZ1Q86V15 1759 aa24.3■■□□□ 1.48
CSNK1D-201ENST00000269361 PTGER2P43116 358 aa24.3■■□□□ 1.48
CSNK1D-201ENST00000269361 USHBP1Q8N6Y0 703 aa24.3■■□□□ 1.48
CSNK1D-201ENST00000269361 SYTL4Q96C24 671 aaPredicted RBP24.3■■□□□ 1.48
CSNK1D-201ENST00000269361 LRRC4BQ9NT99 713 aa24.3■■□□□ 1.48
CSNK1D-201ENST00000269361 MEGF6O75095 1541 aa24.3■■□□□ 1.48
CSNK1D-201ENST00000269361 INSRP06213 1382 aa24.29■■□□□ 1.48
CSNK1D-201ENST00000269361 NSD3Q9BZ95 1437 aa24.29■■□□□ 1.48
CSNK1D-201ENST00000269361 RAPGEF4Q8WZA2 1011 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms