RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 COG3Q96JB2 828 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 NUP62CLQ9H1M0 184 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 NINLQ9Y2I6 1382 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 EXOSC9Q06265 439 aaKnown RBP9.4□□□□□ -0.9
CLTC-201ENST00000269122 CWC27Q6UX04 472 aaKnown RBP9.4□□□□□ -0.9
CLTC-201ENST00000269122 HDAC5Q9UQL6 1122 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 USP8P40818 1118 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 KIAA1328Q86T90 577 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 GOPCQ9HD26 462 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 ERC2O15083 957 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 CFAP100Q494V2 611 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 PSMA5P28066 241 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 MNAT1P51948 309 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 GOLGA6L7A0A1B0GV03 622 aa9.4□□□□□ -0.91
CLTC-201ENST00000269122 UBTFL1P0CB47 393 aaPredicted RBP9.4□□□□□ -0.91
CLTC-201ENST00000269122 LIG1P18858 919 aa9.4□□□□□ -0.91
CLTC-201ENST00000269122 IRX3P78415 501 aaPredicted RBP9.4□□□□□ -0.91
CLTC-201ENST00000269122 MYO6Q9UM54 1294 aa9.4□□□□□ -0.91
CLTC-201ENST00000269122 ANKRD30AQ9BXX3 1397 aa9.4□□□□□ -0.91
CLTC-201ENST00000269122 RUSC2Q8N2Y8 1516 aa9.4□□□□□ -0.91
CLTC-201ENST00000269122 KRI1Q8N9T8 703 aaKnown RBP9.39□□□□□ -0.91
CLTC-201ENST00000269122 PPFIA3O75145 1194 aa9.39□□□□□ -0.91
CLTC-201ENST00000269122 TNPO1Q92973 898 aaKnown RBP9.39□□□□□ -0.91
CLTC-201ENST00000269122 TIGD1Q96MW7 591 aa9.39□□□□□ -0.91
CLTC-201ENST00000269122 GGNBP2Q9H3C7 697 aa9.39□□□□□ -0.91
CLTC-201ENST00000269122 API5Q9BZZ5 524 aaKnown RBP9.39□□□□□ -0.91
CLTC-201ENST00000269122 SPINK5Q9NQ38 1064 aaPredicted RBP9.39□□□□□ -0.91
CLTC-201ENST00000269122 UPF3BQ9BZI7 483 aaKnown RBP9.39□□□□□ -0.91
CLTC-201ENST00000269122 RNF216Q9NWF9 866 aaPredicted RBP9.39□□□□□ -0.91
CLTC-201ENST00000269122 CTDP1Q9Y5B0 961 aaPredicted RBP9.39□□□□□ -0.91
CLTC-201ENST00000269122 RAPGEF2Q9Y4G8 1499 aa9.39□□□□□ -0.91
CLTC-201ENST00000269122 GUCY1B3Q02153 619 aa9.39□□□□□ -0.91
CLTC-201ENST00000269122 MAP2K1Q02750 393 aaPredicted RBP9.39□□□□□ -0.91
CLTC-201ENST00000269122 CLIP2Q9UDT6 1046 aa9.39□□□□□ -0.91
CLTC-201ENST00000269122 SHTN1A0MZ66 631 aa9.39□□□□□ -0.91
CLTC-201ENST00000269122 ADCY5O95622 1261 aa9.39□□□□□ -0.91
CLTC-201ENST00000269122 SMARCA5O60264 1052 aaPredicted RBP9.38□□□□□ -0.91
CLTC-201ENST00000269122 RIC3Q7Z5B4 369 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 CPLX3Q8WVH0 158 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 CRACR2AQ9BSW2 395 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 ERLIN2O94905 339 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 NF2P35240 595 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 CCDC144AA2RUR9 1427 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 KLHL10Q6JEL2 608 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 ZNHIT6Q9NWK9 470 aaKnown RBP9.38□□□□□ -0.91
CLTC-201ENST00000269122 PPARDQ03181 441 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 WDR33Q9C0J8 1336 aaKnown RBP9.38□□□□□ -0.91
CLTC-201ENST00000269122 WIZO95785 1651 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 ROCK1Q13464 1354 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 KRT85P78386 507 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 CWC22Q9HCG8 908 aaKnown RBP9.38□□□□□ -0.91
CLTC-201ENST00000269122 CHD1LQ86WJ1 897 aa9.38□□□□□ -0.91
CLTC-201ENST00000269122 PRDM2Q13029 1718 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 CASTP20810 708 aaKnown RBP9.37□□□□□ -0.91
CLTC-201ENST00000269122 ZNF396Q96N95 335 aaPredicted RBP9.37□□□□□ -0.91
CLTC-201ENST00000269122 TBC1D2Q9BYX2 928 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 KIF18AQ8NI77 898 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 WDR97A6NE52 1622 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 CCDC83Q8IWF9 413 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 JAKMIP1Q96N16 626 aaKnown RBP9.37□□□□□ -0.91
CLTC-201ENST00000269122 MTHFSP49914 203 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 MAP3K11Q16584 847 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 CDK5RAP3Q96JB5 506 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 BRMS1Q9HCU9 246 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 PSME1Q06323 249 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 AMOTL1Q8IY63 956 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 TCP11L2Q8N4U5 519 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 CYP46A1Q9Y6A2 500 aa9.37□□□□□ -0.91
CLTC-201ENST00000269122 CABP2Q9NPB3 220 aa9.36□□□□□ -0.91
CLTC-201ENST00000269122 EPB41L2O43491 1005 aaKnown RBP9.36□□□□□ -0.91
CLTC-201ENST00000269122 C10orf67Q8IYJ2 551 aa9.36□□□□□ -0.91
CLTC-201ENST00000269122 INCENPQ9NQS7 918 aa9.36□□□□□ -0.91
CLTC-201ENST00000269122 ZRSR2Q15696 482 aaKnown RBP9.36□□□□□ -0.91
CLTC-201ENST00000269122 RSPH14Q9UHP6 348 aa9.36□□□□□ -0.91
CLTC-201ENST00000269122 KAT6BQ8WYB5 2073 aa9.36□□□□□ -0.91
CLTC-201ENST00000269122 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
CLTC-201ENST00000269122 TTC5Q8N0Z6 440 aa9.36□□□□□ -0.91
CLTC-201ENST00000269122 LRRFIP1Q32MZ4 808 aaKnown RBP9.36□□□□□ -0.91
CLTC-201ENST00000269122 BIN1O00499 593 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 IKQ13123 557 aaPredicted RBP9.35□□□□□ -0.91
CLTC-201ENST00000269122 HSP90AA4PQ58FG1 418 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 NUP133Q8WUM0 1156 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 SYCP1Q15431 976 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 IL1RAPL2Q9NP60 686 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 MATR3P43243 847 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLTC-201ENST00000269122 KRT18P05783 430 aaKnown RBP9.35□□□□□ -0.91
CLTC-201ENST00000269122 JAKMIP3Q5VZ66 844 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 DNAAF4Q8WXU2 420 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 KIF4BQ2VIQ3 1234 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 EFCAB2Q5VUJ9 269 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 CEP135Q66GS9 1140 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 PDRG1Q9NUG6 133 aa9.35□□□□□ -0.91
CLTC-201ENST00000269122 SSR1P43307 286 aaKnown RBP9.34□□□□□ -0.91
CLTC-201ENST00000269122 CTR9Q6PD62 1173 aa9.34□□□□□ -0.91
CLTC-201ENST00000269122 XRCC6P12956 609 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLTC-201ENST00000269122 ZSCAN23Q3MJ62 389 aa9.34□□□□□ -0.91
CLTC-201ENST00000269122 DYNC1I1O14576 645 aa9.34□□□□□ -0.91
CLTC-201ENST00000269122 PDCP20941 246 aa9.34□□□□□ -0.91
CLTC-201ENST00000269122 EVC2Q86UK5 1308 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms