RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 PLEKHG3A1L390 1219 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 ELL2O00472 640 aaPredicted RBP14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 ADGRB1O14514 1584 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 QRICH2Q9H0J4 1663 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 KCNA6P17658 529 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 GNAI1P63096 354 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 AAMPQ13685 434 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 BCAR3O75815 825 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 PRKAR2BP31323 418 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 C20orf194Q5TEA3 1177 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 KCNH5Q8NCM2 988 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 PKNOX2Q96KN3 472 aa14.25□□□□□ -0.13
CLSTN3-201ENST00000266546 SYAP1Q96A49 352 aaPredicted RBP14.24□□□□□ -0.13
CLSTN3-201ENST00000266546 PDE3AQ14432 1141 aa14.24□□□□□ -0.13
CLSTN3-201ENST00000266546 DZIP1LQ8IYY4 767 aaKnown RBP14.24□□□□□ -0.13
CLSTN3-201ENST00000266546 PLEKHH1Q9ULM0 1364 aa14.24□□□□□ -0.13
CLSTN3-201ENST00000266546 SLFN5Q08AF3 891 aa14.23□□□□□ -0.13
CLSTN3-201ENST00000266546 HMOX1P09601 288 aa14.23□□□□□ -0.13
CLSTN3-201ENST00000266546 DDX19BQ9UMR2 479 aa14.23□□□□□ -0.13
CLSTN3-201ENST00000266546 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
CLSTN3-201ENST00000266546 ANKRD45Q5TZF3 282 aa14.22□□□□□ -0.13
CLSTN3-201ENST00000266546 FAM13BQ9NYF5 915 aa14.22□□□□□ -0.13
CLSTN3-201ENST00000266546 DMRT2Q9Y5R5 561 aa14.22□□□□□ -0.13
CLSTN3-201ENST00000266546 WWC1Q8IX03 1113 aa14.22□□□□□ -0.13
CLSTN3-201ENST00000266546 GAS2L2Q8NHY3 880 aa14.22□□□□□ -0.13
CLSTN3-201ENST00000266546 LTV1Q96GA3 475 aaPredicted RBP14.22□□□□□ -0.13
CLSTN3-201ENST00000266546 PDZRN3Q9UPQ7 1066 aa14.21□□□□□ -0.13
CLSTN3-201ENST00000266546 ST18O60284 1047 aa14.21□□□□□ -0.14
CLSTN3-201ENST00000266546 TMPOP42166 694 aaKnown RBP14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 CADPS2Q86UW7 1296 aa14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 UBE2Q2Q8WVN8 375 aa14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 PHF23Q9BUL5 403 aaPredicted RBP14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 BLMP54132 1417 aaPredicted RBP14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 MCM4P33991 863 aa14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 RRS1Q15050 365 aaKnown RBP14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 CCDC27Q2M243 656 aa14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 PTPRMP28827 1452 aa14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 ROBO2Q9HCK4 1378 aa14.2□□□□□ -0.14
CLSTN3-201ENST00000266546 NPHP4O75161 1426 aaPredicted RBP14.19□□□□□ -0.14
CLSTN3-201ENST00000266546 NFE2L2Q16236 605 aa14.19□□□□□ -0.14
CLSTN3-201ENST00000266546 C19orf44Q9H6X5 657 aa14.19□□□□□ -0.14
CLSTN3-201ENST00000266546 MYO3AQ8NEV4 1616 aa14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 GOLGA6L4A6NEF3 574 aa14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 ZNF428Q96B54 188 aa14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 EMILIN1Q9Y6C2 1016 aa14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 IFT172Q9UG01 1749 aa14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 NCKAP5LQ9HCH0 1330 aa14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 NASPP49321 788 aaPredicted RBP14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 POLKQ9UBT6 870 aa14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 ZRSR1Q15695 479 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 NUTM2GQ5VZR2 741 aa14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 SULT6B1Q6IMI4 303 aa14.18□□□□□ -0.14
CLSTN3-201ENST00000266546 FOXD4L5Q5VV16 416 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-201ENST00000266546 FOXD4L4Q8WXT5 416 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-201ENST00000266546 LNPKQ9C0E8 428 aa14.17□□□□□ -0.14
CLSTN3-201ENST00000266546 SIGLEC1Q9BZZ2 1709 aa14.17□□□□□ -0.14
CLSTN3-201ENST00000266546 TECPR2O15040 1411 aa14.17□□□□□ -0.14
CLSTN3-201ENST00000266546 KIF16BQ96L93 1317 aa14.17□□□□□ -0.14
CLSTN3-201ENST00000266546 ESPNB1AK53 854 aa14.17□□□□□ -0.14
CLSTN3-201ENST00000266546 FER1L4A9Z1Z3 1794 aa14.16□□□□□ -0.14
CLSTN3-201ENST00000266546 IL16Q14005 1332 aa14.16□□□□□ -0.14
CLSTN3-201ENST00000266546 DRC7Q8IY82 874 aa14.16□□□□□ -0.14
CLSTN3-201ENST00000266546 STK31Q9BXU1 1019 aa14.16□□□□□ -0.14
CLSTN3-201ENST00000266546 GRPEL1Q9HAV7 217 aa14.16□□□□□ -0.14
CLSTN3-201ENST00000266546 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-201ENST00000266546 TULP4Q9NRJ4 1543 aa14.16□□□□□ -0.14
CLSTN3-201ENST00000266546 RRP9O43818 475 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-201ENST00000266546 TPM2P07951 284 aa14.16□□□□□ -0.14
CLSTN3-201ENST00000266546 NKTRP30414 1462 aaKnown RBP14.15□□□□□ -0.14
CLSTN3-201ENST00000266546 C1orf141Q5JVX7 400 aa14.15□□□□□ -0.14
CLSTN3-201ENST00000266546 MSH6P52701 1360 aa14.15□□□□□ -0.14
CLSTN3-201ENST00000266546 ADAMTS13Q76LX8 1427 aa14.14□□□□□ -0.15
CLSTN3-201ENST00000266546 PTCH1Q13635 1447 aa14.14□□□□□ -0.15
CLSTN3-201ENST00000266546 ANKARQ7Z5J8 1434 aa14.14□□□□□ -0.15
CLSTN3-201ENST00000266546 DUSP27Q5VZP5 1158 aa14.14□□□□□ -0.15
CLSTN3-201ENST00000266546 KCNJ4P48050 445 aa14.14□□□□□ -0.15
CLSTN3-201ENST00000266546 AATKQ6ZMQ8 1374 aa14.14□□□□□ -0.15
CLSTN3-201ENST00000266546 MED14O60244 1454 aa14.14□□□□□ -0.15
CLSTN3-201ENST00000266546 DIP2AQ14689 1571 aa14.13□□□□□ -0.15
CLSTN3-201ENST00000266546 PHF14O94880 888 aa14.13□□□□□ -0.15
CLSTN3-201ENST00000266546 NOL8Q76FK4 1167 aaKnown RBP14.13□□□□□ -0.15
CLSTN3-201ENST00000266546 R3HCC1Q9Y3T6 440 aaKnown RBP14.13□□□□□ -0.15
CLSTN3-201ENST00000266546 ZNF330Q9Y3S2 320 aaPredicted RBP14.13□□□□□ -0.15
CLSTN3-201ENST00000266546 CSPP1Q1MSJ5 1256 aa14.13□□□□□ -0.15
CLSTN3-201ENST00000266546 NUCB2P80303 420 aa14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 KRT28Q7Z3Y7 464 aa14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 SETD1BQ9UPS6 1966 aaKnown RBP14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 PLEKHO1Q53GL0 409 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 TSR2Q969E8 191 aaKnown RBP14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 API5Q9BZZ5 524 aaKnown RBP14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 FOXO3O43524 673 aa14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 MEX3CQ5U5Q3 659 aaKnown RBP14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 MCTP1Q6DN14 999 aa14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 FLT4P35916 1363 aa14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 TEFQ10587 303 aa14.12□□□□□ -0.15
CLSTN3-201ENST00000266546 SLIT1O75093 1534 aa14.11□□□□□ -0.15
CLSTN3-201ENST00000266546 SLC4A10Q6U841 1118 aa14.11□□□□□ -0.15
CLSTN3-201ENST00000266546 RAPGEF4Q8WZA2 1011 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms