RNA–Protein interactions for RNA: ENST00000264031.2

UPK2-201, Transcript of uroplakin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK2, Length 916 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-201ENST00000264031 CD163L1Q9NR16 1453 aa23.57■■□□□ 1.36
UPK2-201ENST00000264031 THRAP3Q9Y2W1 955 aaKnown RBP23.57■■□□□ 1.36
UPK2-201ENST00000264031 PARD3Q8TEW0 1356 aa23.56■■□□□ 1.36
UPK2-201ENST00000264031 OVOS2A0A0G2JMS6 1433 aa23.54■■□□□ 1.36
UPK2-201ENST00000264031 OVOS2A0A0J9YW53 1432 aa23.54■■□□□ 1.36
UPK2-201ENST00000264031 OVOS2Q6IE36 1432 aa23.54■■□□□ 1.36
UPK2-201ENST00000264031 ARHGEF25Q86VW2 580 aa23.53■■□□□ 1.36
UPK2-201ENST00000264031 SOX12O15370 315 aa23.52■■□□□ 1.36
UPK2-201ENST00000264031 PTF1AQ7RTS3 328 aa23.52■■□□□ 1.36
UPK2-201ENST00000264031 WDR17Q8IZU2 1322 aa23.52■■□□□ 1.36
UPK2-201ENST00000264031 KTN1Q86UP2 1357 aaKnown RBP23.52■■□□□ 1.36
UPK2-201ENST00000264031 SBNO2Q9Y2G9 1366 aa23.52■■□□□ 1.36
UPK2-201ENST00000264031 CASZ1Q86V15 1759 aa23.51■■□□□ 1.35
UPK2-201ENST00000264031 ABCC6O95255 1503 aa23.5■■□□□ 1.35
UPK2-201ENST00000264031 TOM1L2Q6ZVM7 507 aa23.5■■□□□ 1.35
UPK2-201ENST00000264031 TTC21AQ8NDW8 1320 aa23.49■■□□□ 1.35
UPK2-201ENST00000264031 ZNF692Q9BU19 519 aaPredicted RBP23.47■■□□□ 1.35
UPK2-201ENST00000264031 NHSQ6T4R5 1651 aa23.45■■□□□ 1.34
UPK2-201ENST00000264031 DDB1Q16531 1140 aa23.45■■□□□ 1.34
UPK2-201ENST00000264031 MARCH10Q8NA82 808 aaPredicted RBP23.45■■□□□ 1.34
UPK2-201ENST00000264031 KCNH5Q8NCM2 988 aa23.44■■□□□ 1.34
UPK2-201ENST00000264031 KAT6BQ8WYB5 2073 aa23.44■■□□□ 1.34
UPK2-201ENST00000264031 USP31Q70CQ4 1352 aa23.43■■□□□ 1.34
UPK2-201ENST00000264031 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
UPK2-201ENST00000264031 NME9Q86XW9 330 aa23.43■■□□□ 1.34
UPK2-201ENST00000264031 CARD11Q9BXL7 1154 aa23.43■■□□□ 1.34
UPK2-201ENST00000264031 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.42■■□□□ 1.34
UPK2-201ENST00000264031 BCL9O00512 1426 aa23.42■■□□□ 1.34
UPK2-201ENST00000264031 TNS2Q63HR2 1409 aa23.42■■□□□ 1.34
UPK2-201ENST00000264031 BTAF1O14981 1849 aa23.41■■□□□ 1.34
UPK2-201ENST00000264031 CARD10Q9BWT7 1032 aa23.41■■□□□ 1.34
UPK2-201ENST00000264031 ANO8Q9HCE9 1232 aaPredicted RBP23.41■■□□□ 1.34
UPK2-201ENST00000264031 UTRNP46939 3433 aa23.4■■□□□ 1.34
UPK2-201ENST00000264031 A0A1W2PP64 1363 aa23.4■■□□□ 1.34
UPK2-201ENST00000264031 SLC12A5Q9H2X9 1139 aa23.38■■□□□ 1.33
UPK2-201ENST00000264031 SHANK3Q9BYB0 1731 aa23.37■■□□□ 1.33
UPK2-201ENST00000264031 EDC4Q6P2E9 1401 aaKnown RBP23.37■■□□□ 1.33
UPK2-201ENST00000264031 CSB-PGBD3P0DP91 1061 aa23.37■■□□□ 1.33
UPK2-201ENST00000264031 PROM2Q8N271 834 aa23.37■■□□□ 1.33
UPK2-201ENST00000264031 FAM208AQ9UK61 1670 aaKnown RBP23.37■■□□□ 1.33
UPK2-201ENST00000264031 TONSLQ96HA7 1378 aa23.37■■□□□ 1.33
UPK2-201ENST00000264031 MYOM1P52179 1685 aa23.36■■□□□ 1.33
UPK2-201ENST00000264031 PLSCR1O15162 318 aa23.36■■□□□ 1.33
UPK2-201ENST00000264031 BCL11BQ9C0K0 894 aaPredicted RBP23.36■■□□□ 1.33
UPK2-201ENST00000264031 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
UPK2-201ENST00000264031 ERBB3P21860 1342 aa23.35■■□□□ 1.33
UPK2-201ENST00000264031 PAPPAQ13219 1627 aa23.35■■□□□ 1.33
UPK2-201ENST00000264031 C11orf95C9JLR9 678 aaPredicted RBP23.35■■□□□ 1.33
UPK2-201ENST00000264031 NBPF14Q5TI25 921 aa23.35■■□□□ 1.33
UPK2-201ENST00000264031 TMC1Q8TDI8 760 aa23.35■■□□□ 1.33
UPK2-201ENST00000264031 CDCA7Q9BWT1 371 aaPredicted RBP23.35■■□□□ 1.33
UPK2-201ENST00000264031 PDGFDQ9GZP0 370 aaPredicted RBP23.35■■□□□ 1.33
UPK2-201ENST00000264031 TESK2Q96S53 571 aa23.32■■□□□ 1.32
UPK2-201ENST00000264031 KCNQ2O43526 872 aa23.31■■□□□ 1.32
UPK2-201ENST00000264031 TUBGCP6Q96RT7 1819 aa23.3■■□□□ 1.32
UPK2-201ENST00000264031 DOT1LQ8TEK3 1739 aa23.29■■□□□ 1.32
UPK2-201ENST00000264031 KIF20BQ96Q89 1820 aa23.29■■□□□ 1.32
UPK2-201ENST00000264031 EXOC5O00471 708 aa23.28■■□□□ 1.32
UPK2-201ENST00000264031 HDGFL2Q7Z4V5 671 aaPredicted RBP23.28■■□□□ 1.32
UPK2-201ENST00000264031 ANKRD24Q8TF21 1146 aa23.27■■□□□ 1.32
UPK2-201ENST00000264031 NLRP2Q9NX02 1062 aa23.27■■□□□ 1.32
UPK2-201ENST00000264031 ST20-MTHFSA0A0A6YYL1 179 aa23.26■■□□□ 1.31
UPK2-201ENST00000264031 SPON1Q9HCB6 807 aa23.26■■□□□ 1.31
UPK2-201ENST00000264031 TXNRD1Q16881 649 aa23.25■■□□□ 1.31
UPK2-201ENST00000264031 ACSBG1Q96GR2 724 aa23.25■■□□□ 1.31
UPK2-201ENST00000264031 FBLN1P23142 703 aa23.24■■□□□ 1.31
UPK2-201ENST00000264031 PUS7Q96PZ0 661 aaKnown RBP23.23■■□□□ 1.31
UPK2-201ENST00000264031 TERF2IPQ9NYB0 399 aa23.23■■□□□ 1.31
UPK2-201ENST00000264031 QSER1Q2KHR3 1735 aa23.22■■□□□ 1.31
UPK2-201ENST00000264031 IL2RBP14784 551 aa23.22■■□□□ 1.31
UPK2-201ENST00000264031 GOLGB1Q14789 3259 aaKnown RBP23.21■■□□□ 1.31
UPK2-201ENST00000264031 NINLQ9Y2I6 1382 aa23.21■■□□□ 1.31
UPK2-201ENST00000264031 LY75O60449 1722 aa23.21■■□□□ 1.31
UPK2-201ENST00000264031 ZBTB7AO95365 584 aa23.2■■□□□ 1.3
UPK2-201ENST00000264031 PTGER2P43116 358 aa23.19■■□□□ 1.3
UPK2-201ENST00000264031 IP6K1Q92551 441 aa23.19■■□□□ 1.3
UPK2-201ENST00000264031 PPP1R1BQ9UD71 204 aaPredicted RBP23.19■■□□□ 1.3
UPK2-201ENST00000264031 MAP3K19Q56UN5 1328 aa23.18■■□□□ 1.3
UPK2-201ENST00000264031 LTV1Q96GA3 475 aaPredicted RBP23.18■■□□□ 1.3
UPK2-201ENST00000264031 MEGF6O75095 1541 aa23.18■■□□□ 1.3
UPK2-201ENST00000264031 ANKRD36BQ8N2N9 1353 aa23.17■■□□□ 1.3
UPK2-201ENST00000264031 COL24A1Q17RW2 1714 aa23.17■■□□□ 1.3
UPK2-201ENST00000264031 SLC15A2Q16348 729 aa23.17■■□□□ 1.3
UPK2-201ENST00000264031 USP47Q96K76 1375 aa23.15■■□□□ 1.3
UPK2-201ENST00000264031 HOXC9P31274 260 aa23.15■■□□□ 1.3
UPK2-201ENST00000264031 STK32BQ9NY57 414 aa23.15■■□□□ 1.3
UPK2-201ENST00000264031 ATF5Q9Y2D1 282 aaPredicted RBP23.14■■□□□ 1.29
UPK2-201ENST00000264031 ZNF827Q17R98 1081 aa23.13■■□□□ 1.29
UPK2-201ENST00000264031 LRRC4BQ9NT99 713 aa23.13■■□□□ 1.29
UPK2-201ENST00000264031 COG3Q96JB2 828 aa23.12■■□□□ 1.29
UPK2-201ENST00000264031 ANKRD26Q9UPS8 1709 aa23.12■■□□□ 1.29
UPK2-201ENST00000264031 NSD2O96028 1365 aa23.12■■□□□ 1.29
UPK2-201ENST00000264031 CHD4Q14839 1912 aa23.12■■□□□ 1.29
UPK2-201ENST00000264031 SGIP1Q9BQI5 828 aa23.11■■□□□ 1.29
UPK2-201ENST00000264031 TOGARAM1Q9Y4F4 1720 aa23.11■■□□□ 1.29
UPK2-201ENST00000264031 RRS1Q15050 365 aaKnown RBP23.1■■□□□ 1.29
UPK2-201ENST00000264031 ITGB4P16144 1822 aa23.1■■□□□ 1.29
UPK2-201ENST00000264031 DDX54Q8TDD1 881 aaKnown RBP23.09■■□□□ 1.29
UPK2-201ENST00000264031 RTL1A6NKG5 1358 aa23.09■■□□□ 1.29
UPK2-201ENST00000264031 TAF1LQ8IZX4 1826 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms