RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 TERF2IPQ9NYB0 399 aa17.3■□□□□ 0.36
SCARF1-201ENST00000263071 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
SCARF1-201ENST00000263071 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
SCARF1-201ENST00000263071 DTNBO60941 627 aa17.3■□□□□ 0.36
SCARF1-201ENST00000263071 TNNT3P45378 269 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-201ENST00000263071 TRIM34Q9BYJ4 488 aa17.3■□□□□ 0.36
SCARF1-201ENST00000263071 NCKAP5LQ9HCH0 1330 aa17.3■□□□□ 0.36
SCARF1-201ENST00000263071 MAST1Q9Y2H9 1570 aa17.3■□□□□ 0.36
SCARF1-201ENST00000263071 FYB1O15117 783 aa17.3■□□□□ 0.36
SCARF1-201ENST00000263071 C14orf93Q9H972 538 aaKnown RBP17.3■□□□□ 0.36
SCARF1-201ENST00000263071 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-201ENST00000263071 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
SCARF1-201ENST00000263071 NGEFQ8N5V2 710 aa17.29■□□□□ 0.36
SCARF1-201ENST00000263071 ZNF428Q96B54 188 aa17.29■□□□□ 0.36
SCARF1-201ENST00000263071 EIF2AK4Q9P2K8 1649 aaKnown RBP17.29■□□□□ 0.36
SCARF1-201ENST00000263071 ZKSCAN5Q9Y2L8 839 aa17.29■□□□□ 0.36
SCARF1-201ENST00000263071 CHD1O14646 1710 aa17.29■□□□□ 0.36
SCARF1-201ENST00000263071 GOLGA6L22H0YM25 854 aa17.28■□□□□ 0.36
SCARF1-201ENST00000263071 IDI1Q13907 227 aa17.28■□□□□ 0.36
SCARF1-201ENST00000263071 PDCL2Q8N4E4 241 aa17.28■□□□□ 0.36
SCARF1-201ENST00000263071 PTPRTO14522 1441 aa17.28■□□□□ 0.36
SCARF1-201ENST00000263071 JARID2Q92833 1246 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-201ENST00000263071 CAVIN1Q6NZI2 390 aaKnown RBP17.28■□□□□ 0.36
SCARF1-201ENST00000263071 TBC1D9Q6ZT07 1266 aa17.28■□□□□ 0.36
SCARF1-201ENST00000263071 TIGD1Q96MW7 591 aa17.28■□□□□ 0.36
SCARF1-201ENST00000263071 CLGNO14967 610 aa17.27■□□□□ 0.36
SCARF1-201ENST00000263071 FBXO31Q5XUX0 539 aaPredicted RBP17.27■□□□□ 0.36
SCARF1-201ENST00000263071 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.36
SCARF1-201ENST00000263071 RNF214Q8ND24 703 aa17.27■□□□□ 0.35
SCARF1-201ENST00000263071 MYRIPQ8NFW9 859 aa17.27■□□□□ 0.35
SCARF1-201ENST00000263071 GAS2L2Q8NHY3 880 aa17.27■□□□□ 0.35
SCARF1-201ENST00000263071 CDK19Q9BWU1 502 aa17.27■□□□□ 0.35
SCARF1-201ENST00000263071 ZBTB40Q9NUA8 1239 aa17.27■□□□□ 0.35
SCARF1-201ENST00000263071 PATL2C9JE40 543 aaKnown RBP17.26■□□□□ 0.35
SCARF1-201ENST00000263071 PTMSP20962 102 aa17.26■□□□□ 0.35
SCARF1-201ENST00000263071 CHMP4CQ96CF2 233 aa17.26■□□□□ 0.35
SCARF1-201ENST00000263071 FAM177BA6PVY3 158 aa17.26■□□□□ 0.35
SCARF1-201ENST00000263071 MYO5CQ9NQX4 1742 aa17.25■□□□□ 0.35
SCARF1-201ENST00000263071 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.25■□□□□ 0.35
SCARF1-201ENST00000263071 HMGN5P82970 282 aaKnown RBP17.25■□□□□ 0.35
SCARF1-201ENST00000263071 PLCB2Q00722 1185 aa17.25■□□□□ 0.35
SCARF1-201ENST00000263071 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
SCARF1-201ENST00000263071 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
SCARF1-201ENST00000263071 FANCAO15360 1455 aa17.24■□□□□ 0.35
SCARF1-201ENST00000263071 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-201ENST00000263071 ABCC2Q92887 1545 aa17.23■□□□□ 0.35
SCARF1-201ENST00000263071 MCM5P33992 734 aa17.23■□□□□ 0.35
SCARF1-201ENST00000263071 NME9Q86XW9 330 aa17.23■□□□□ 0.35
SCARF1-201ENST00000263071 NINLQ9Y2I6 1382 aa17.23■□□□□ 0.35
SCARF1-201ENST00000263071 ADGRL1O94910 1474 aa17.23■□□□□ 0.35
SCARF1-201ENST00000263071 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-201ENST00000263071 NUCB1Q02818 461 aa17.23■□□□□ 0.35
SCARF1-201ENST00000263071 PKP1Q13835 747 aa17.23■□□□□ 0.35
SCARF1-201ENST00000263071 A0A1W2PP64 1363 aa17.22■□□□□ 0.35
SCARF1-201ENST00000263071 C8orf58Q8NAV2 365 aa17.22■□□□□ 0.35
SCARF1-201ENST00000263071 RBM27Q9P2N5 1060 aaKnown RBP17.22■□□□□ 0.35
SCARF1-201ENST00000263071 PRPF40AO75400 957 aaKnown RBP17.22■□□□□ 0.35
SCARF1-201ENST00000263071 SMC5Q8IY18 1101 aa17.22■□□□□ 0.35
SCARF1-201ENST00000263071 TRERF1Q96PN7 1200 aa17.22■□□□□ 0.35
SCARF1-201ENST00000263071 CCDC39Q9UFE4 941 aa17.22■□□□□ 0.35
SCARF1-201ENST00000263071 NPC1L1Q9UHC9 1359 aa17.21■□□□□ 0.35
SCARF1-201ENST00000263071 HDAC1Q13547 482 aaPredicted RBP17.21■□□□□ 0.35
SCARF1-201ENST00000263071 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.35
SCARF1-201ENST00000263071 U2AF2P26368 475 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCARF1-201ENST00000263071 SLC20A2Q08357 652 aa17.21■□□□□ 0.35
SCARF1-201ENST00000263071 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.35
SCARF1-201ENST00000263071 MCM10Q7L590 875 aa17.21■□□□□ 0.35
SCARF1-201ENST00000263071 ZNF710Q8N1W2 664 aa17.21■□□□□ 0.35
SCARF1-201ENST00000263071 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
SCARF1-201ENST00000263071 SYNMO15061 1565 aa17.2■□□□□ 0.34
SCARF1-201ENST00000263071 MBIPQ9NS73 344 aa17.2■□□□□ 0.34
SCARF1-201ENST00000263071 KCNG1Q9UIX4 513 aa17.2■□□□□ 0.34
SCARF1-201ENST00000263071 UNC13BO14795 1591 aa17.2■□□□□ 0.34
SCARF1-201ENST00000263071 MADDQ8WXG6 1647 aa17.19■□□□□ 0.34
SCARF1-201ENST00000263071 FAM193AP78312 1265 aa17.19■□□□□ 0.34
SCARF1-201ENST00000263071 PRIMPOLQ96LW4 560 aa17.19■□□□□ 0.34
SCARF1-201ENST00000263071 F6X3S4 739 aa17.18■□□□□ 0.34
SCARF1-201ENST00000263071 ZGPATQ8N5A5 531 aaKnown RBP17.18■□□□□ 0.34
SCARF1-201ENST00000263071 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
SCARF1-201ENST00000263071 LARP6Q9BRS8 491 aaKnown RBP17.18■□□□□ 0.34
SCARF1-201ENST00000263071 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
SCARF1-201ENST00000263071 TXNDC2Q86VQ3 553 aa17.18■□□□□ 0.34
SCARF1-201ENST00000263071 PLEKHF1Q96S99 279 aa17.18■□□□□ 0.34
SCARF1-201ENST00000263071 CCDC27Q2M243 656 aa17.17■□□□□ 0.34
SCARF1-201ENST00000263071 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.17■□□□□ 0.34
SCARF1-201ENST00000263071 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
SCARF1-201ENST00000263071 ERICH4A6NGS2 130 aa17.17■□□□□ 0.34
SCARF1-201ENST00000263071 TSPYL1Q9H0U9 437 aa17.16■□□□□ 0.34
SCARF1-201ENST00000263071 CALCOCO1Q9P1Z2 691 aa17.16■□□□□ 0.34
SCARF1-201ENST00000263071 ZBTB7BO15156 539 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-201ENST00000263071 CDC45O75419 566 aa17.16■□□□□ 0.34
SCARF1-201ENST00000263071 KDM5AP29375 1690 aaKnown RBP17.15■□□□□ 0.34
SCARF1-201ENST00000263071 VAMP4O75379 141 aa17.15■□□□□ 0.34
SCARF1-201ENST00000263071 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
SCARF1-201ENST00000263071 SIRT2Q8IXJ6 389 aa17.15■□□□□ 0.34
SCARF1-201ENST00000263071 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-201ENST00000263071 GDPD2Q9HCC8 539 aa17.15■□□□□ 0.34
SCARF1-201ENST00000263071 POLKQ9UBT6 870 aa17.15■□□□□ 0.34
SCARF1-201ENST00000263071 CD109Q6YHK3 1445 aa17.15■□□□□ 0.34
SCARF1-201ENST00000263071 MAP4K4O95819 1239 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms