RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 LMO7Q8WWI1 1683 aa25.56■■□□□ 1.68
COPE-201ENST00000262812 COL5A2P05997 1499 aaPredicted RBP25.56■■□□□ 1.68
COPE-201ENST00000262812 FAM182BQ5T319 152 aa25.56■■□□□ 1.68
COPE-201ENST00000262812 FYB1O15117 783 aa25.55■■□□□ 1.68
COPE-201ENST00000262812 FBLN1P23142 703 aa25.55■■□□□ 1.68
COPE-201ENST00000262812 NFAT5O94916 1531 aa25.54■■□□□ 1.68
COPE-201ENST00000262812 BARGINQ6ZT62 677 aa25.54■■□□□ 1.68
COPE-201ENST00000262812 C11orf95C9JLR9 678 aaPredicted RBP25.52■■□□□ 1.68
COPE-201ENST00000262812 THRAP3Q9Y2W1 955 aaKnown RBP25.52■■□□□ 1.68
COPE-201ENST00000262812 WDR17Q8IZU2 1322 aa25.52■■□□□ 1.68
COPE-201ENST00000262812 OVOS2A0A0J9YW53 1432 aa25.52■■□□□ 1.68
COPE-201ENST00000262812 CRB1P82279 1406 aa25.52■■□□□ 1.68
COPE-201ENST00000262812 OVOS2Q6IE36 1432 aa25.52■■□□□ 1.68
COPE-201ENST00000262812 PDE3BQ13370 1112 aa25.49■■□□□ 1.67
COPE-201ENST00000262812 CCDC125Q86Z20 511 aa25.49■■□□□ 1.67
COPE-201ENST00000262812 BRWD3Q6RI45 1802 aa25.48■■□□□ 1.67
COPE-201ENST00000262812 COL18A1P39060 1754 aa25.48■■□□□ 1.67
COPE-201ENST00000262812 NSD3Q9BZ95 1437 aa25.47■■□□□ 1.67
COPE-201ENST00000262812 EP400Q96L91 3159 aa25.46■■□□□ 1.67
COPE-201ENST00000262812 AMPHP49418 695 aa25.46■■□□□ 1.67
COPE-201ENST00000262812 ANKRD24Q8TF21 1146 aa25.46■■□□□ 1.67
COPE-201ENST00000262812 LTV1Q96GA3 475 aaPredicted RBP25.46■■□□□ 1.67
COPE-201ENST00000262812 CARD10Q9BWT7 1032 aa25.46■■□□□ 1.67
COPE-201ENST00000262812 PANK3Q9H999 370 aa25.46■■□□□ 1.67
COPE-201ENST00000262812 NLRP2Q9NX02 1062 aa25.46■■□□□ 1.67
COPE-201ENST00000262812 MAP3K19Q56UN5 1328 aa25.45■■□□□ 1.66
COPE-201ENST00000262812 SF3B2Q13435 895 aaKnown RBP25.45■■□□□ 1.66
COPE-201ENST00000262812 IP6K1Q92551 441 aa25.45■■□□□ 1.66
COPE-201ENST00000262812 RRS1Q15050 365 aaKnown RBP25.44■■□□□ 1.66
COPE-201ENST00000262812 USP54Q70EL1 1684 aa25.43■■□□□ 1.66
COPE-201ENST00000262812 THSD7AQ9UPZ6 1657 aa25.43■■□□□ 1.66
COPE-201ENST00000262812 ERBB3P21860 1342 aa25.41■■□□□ 1.66
COPE-201ENST00000262812 BLMP54132 1417 aaPredicted RBP25.41■■□□□ 1.66
COPE-201ENST00000262812 DEFB132Q7Z7B7 95 aa25.41■■□□□ 1.66
COPE-201ENST00000262812 MYOM1P52179 1685 aa25.41■■□□□ 1.66
COPE-201ENST00000262812 CGNL1Q0VF96 1302 aa25.4■■□□□ 1.66
COPE-201ENST00000262812 HOXC9P31274 260 aa25.4■■□□□ 1.66
COPE-201ENST00000262812 DDB1Q16531 1140 aa25.4■■□□□ 1.66
COPE-201ENST00000262812 FAM196AQ6ZSG2 479 aa25.4■■□□□ 1.66
COPE-201ENST00000262812 RGPD5Q99666 1765 aa25.38■■□□□ 1.65
COPE-201ENST00000262812 KIF7Q2M1P5 1343 aa25.37■■□□□ 1.65
COPE-201ENST00000262812 TRIM37O94972 964 aa25.37■■□□□ 1.65
COPE-201ENST00000262812 CDCA7Q9BWT1 371 aaPredicted RBP25.37■■□□□ 1.65
COPE-201ENST00000262812 ABCC6O95255 1503 aa25.36■■□□□ 1.65
COPE-201ENST00000262812 CCDC7Q96M83 1385 aa25.35■■□□□ 1.65
COPE-201ENST00000262812 LTN1O94822 1766 aa25.34■■□□□ 1.65
COPE-201ENST00000262812 EXOC5O00471 708 aa25.34■■□□□ 1.65
COPE-201ENST00000262812 PPM1GO15355 546 aaPredicted RBP25.34■■□□□ 1.65
COPE-201ENST00000262812 TNNT2P45379 298 aaPredicted RBP25.34■■□□□ 1.65
COPE-201ENST00000262812 HSP90AB2PQ58FF8 381 aa25.32■■□□□ 1.64
COPE-201ENST00000262812 EMILIN1Q9Y6C2 1016 aa25.32■■□□□ 1.64
COPE-201ENST00000262812 IL2RBP14784 551 aa25.31■■□□□ 1.64
COPE-201ENST00000262812 BAG6P46379 1132 aa25.31■■□□□ 1.64
COPE-201ENST00000262812 MARCH10Q8NA82 808 aaPredicted RBP25.31■■□□□ 1.64
COPE-201ENST00000262812 EN1Q05925 392 aaPredicted RBP25.3■■□□□ 1.64
COPE-201ENST00000262812 KNSTRNQ9Y448 316 aa25.29■■□□□ 1.64
COPE-201ENST00000262812 DISP2A7MBM2 1401 aa25.29■■□□□ 1.64
COPE-201ENST00000262812 APBA3O96018 575 aa25.28■■□□□ 1.64
COPE-201ENST00000262812 RTL1A6NKG5 1358 aa25.28■■□□□ 1.64
COPE-201ENST00000262812 KIF20BQ96Q89 1820 aa25.28■■□□□ 1.64
COPE-201ENST00000262812 NBPF6Q5VWK0 638 aa25.26■■□□□ 1.63
COPE-201ENST00000262812 USHBP1Q8N6Y0 703 aa25.26■■□□□ 1.63
COPE-201ENST00000262812 NBPF4Q96M43 638 aa25.26■■□□□ 1.63
COPE-201ENST00000262812 MORC1Q86VD1 984 aa25.25■■□□□ 1.63
COPE-201ENST00000262812 POLKQ9UBT6 870 aa25.25■■□□□ 1.63
COPE-201ENST00000262812 PARP4Q9UKK3 1724 aaKnown RBP25.25■■□□□ 1.63
COPE-201ENST00000262812 INSRP06213 1382 aa25.24■■□□□ 1.63
COPE-201ENST00000262812 FLT4P35916 1363 aa25.24■■□□□ 1.63
COPE-201ENST00000262812 OVOS2A0A0G2JMS6 1433 aa25.23■■□□□ 1.63
COPE-201ENST00000262812 WASHC2AQ641Q2 1341 aa25.23■■□□□ 1.63
COPE-201ENST00000262812 EZH2Q15910 746 aaKnown RBP25.22■■□□□ 1.63
COPE-201ENST00000262812 LRRC37A3O60309 1634 aa25.22■■□□□ 1.63
COPE-201ENST00000262812 SMG6Q86US8 1419 aaKnown RBP25.21■■□□□ 1.63
COPE-201ENST00000262812 PTF1AQ7RTS3 328 aa25.21■■□□□ 1.63
COPE-201ENST00000262812 DDX54Q8TDD1 881 aaKnown RBP25.21■■□□□ 1.63
COPE-201ENST00000262812 KIF24Q5T7B8 1368 aa25.2■■□□□ 1.63
COPE-201ENST00000262812 CNGB1Q14028 1251 aaPredicted RBP25.19■■□□□ 1.62
COPE-201ENST00000262812 CAMKK2Q96RR4 588 aa25.18■■□□□ 1.62
COPE-201ENST00000262812 TNS2Q63HR2 1409 aa25.18■■□□□ 1.62
COPE-201ENST00000262812 NSD2O96028 1365 aa25.18■■□□□ 1.62
COPE-201ENST00000262812 PEAK1Q9H792 1746 aa25.17■■□□□ 1.62
COPE-201ENST00000262812 AMER1Q5JTC6 1135 aaPredicted RBP25.17■■□□□ 1.62
COPE-201ENST00000262812 ACSBG1Q96GR2 724 aa25.17■■□□□ 1.62
COPE-201ENST00000262812 BCL11BQ9C0K0 894 aaPredicted RBP25.17■■□□□ 1.62
COPE-201ENST00000262812 RAPGEF4Q8WZA2 1011 aa25.16■■□□□ 1.62
COPE-201ENST00000262812 RGPD1P0DJD0 1748 aa25.15■■□□□ 1.62
COPE-201ENST00000262812 WNK3Q9BYP7 1800 aa25.15■■□□□ 1.62
COPE-201ENST00000262812 PER1O15534 1290 aaPredicted RBP25.15■■□□□ 1.62
COPE-201ENST00000262812 CC2D1BQ5T0F9 858 aaKnown RBP25.15■■□□□ 1.62
COPE-201ENST00000262812 ZCRB1Q8TBF4 217 aaKnown RBP25.15■■□□□ 1.62
COPE-201ENST00000262812 KCNQ2O43526 872 aa25.14■■□□□ 1.62
COPE-201ENST00000262812 TATP17735 454 aaPredicted RBP25.13■■□□□ 1.61
COPE-201ENST00000262812 EYA1Q99502 592 aa25.12■■□□□ 1.61
COPE-201ENST00000262812 EIF4A2Q14240 407 aaKnown RBP25.11■■□□□ 1.61
COPE-201ENST00000262812 TNS1Q9HBL0 1735 aaKnown RBP25.1■■□□□ 1.61
COPE-201ENST00000262812 PSDA5PKW4 1024 aaPredicted RBP25.1■■□□□ 1.61
COPE-201ENST00000262812 MEGF6O75095 1541 aa25.1■■□□□ 1.61
COPE-201ENST00000262812 BCL9O00512 1426 aa25.1■■□□□ 1.61
COPE-201ENST00000262812 FAM208AQ9UK61 1670 aaKnown RBP25.1■■□□□ 1.61
COPE-201ENST00000262812 RGPD2P0DJD1 1756 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms