RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 OLFM4Q6UX06 510 aa14.55□□□□□ -0.08
SPG11-201ENST00000261866 SLC4A8Q2Y0W8 1093 aa14.55□□□□□ -0.08
SPG11-201ENST00000261866 ABCF2Q9UG63 623 aa14.55□□□□□ -0.08
SPG11-201ENST00000261866 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
SPG11-201ENST00000261866 CHMP5Q9NZZ3 219 aa14.55□□□□□ -0.08
SPG11-201ENST00000261866 OFD1O75665 1012 aa14.55□□□□□ -0.08
SPG11-201ENST00000261866 IFT57Q9NWB7 429 aa14.55□□□□□ -0.08
SPG11-201ENST00000261866 SRGAP3O43295 1099 aa14.54□□□□□ -0.08
SPG11-201ENST00000261866 HSP90AB2PQ58FF8 381 aa14.54□□□□□ -0.08
SPG11-201ENST00000261866 USP5P45974 858 aa14.54□□□□□ -0.08
SPG11-201ENST00000261866 CWC27Q6UX04 472 aaKnown RBP14.54□□□□□ -0.08
SPG11-201ENST00000261866 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.54□□□□□ -0.084e-6■■□□□ 12.1
SPG11-201ENST00000261866 MPNDQ8N594 471 aa14.54□□□□□ -0.08
SPG11-201ENST00000261866 CCDC69A6NI79 296 aa14.54□□□□□ -0.08
SPG11-201ENST00000261866 IDH1O75874 414 aaKnown RBP14.54□□□□□ -0.08
SPG11-201ENST00000261866 NGLY1Q96IV0 654 aa14.54□□□□□ -0.08
SPG11-201ENST00000261866 LRRCC1Q9C099 1032 aa14.53□□□□□ -0.08
SPG11-201ENST00000261866 FIBPO43427 364 aa14.53□□□□□ -0.08
SPG11-201ENST00000261866 LRP2BPQ9P2M1 347 aa14.53□□□□□ -0.08
SPG11-201ENST00000261866 TMOD3Q9NYL9 352 aa14.53□□□□□ -0.08
SPG11-201ENST00000261866 TDO2P48775 406 aa14.53□□□□□ -0.08
SPG11-201ENST00000261866 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.53□□□□□ -0.08
SPG11-201ENST00000261866 SMC2O95347 1197 aa14.52□□□□□ -0.08
SPG11-201ENST00000261866 NME9Q86XW9 330 aa14.52□□□□□ -0.08
SPG11-201ENST00000261866 IFT140Q96RY7 1462 aa14.52□□□□□ -0.08
SPG11-201ENST00000261866 ARHGEF11O15085 1522 aa14.52□□□□□ -0.09
SPG11-201ENST00000261866 NCAPD3P42695 1498 aa14.52□□□□□ -0.09
SPG11-201ENST00000261866 ZPR1O75312 459 aa14.51□□□□□ -0.09
SPG11-201ENST00000261866 MYD88Q99836 296 aa14.51□□□□□ -0.09
SPG11-201ENST00000261866 ANKIB1Q9P2G1 1089 aa14.51□□□□□ -0.09
SPG11-201ENST00000261866 ERC1Q8IUD2 1116 aa14.51□□□□□ -0.09
SPG11-201ENST00000261866 PRPF40AO75400 957 aaKnown RBP14.51□□□□□ -0.09
SPG11-201ENST00000261866 CCDC184Q52MB2 194 aa14.51□□□□□ -0.09
SPG11-201ENST00000261866 WWC2Q6AWC2 1192 aa14.51□□□□□ -0.09
SPG11-201ENST00000261866 SMARCA5O60264 1052 aaPredicted RBP14.51□□□□□ -0.09
SPG11-201ENST00000261866 AKNAQ7Z591 1439 aa14.51□□□□□ -0.09
SPG11-201ENST00000261866 GNAT3A8MTJ3 354 aa14.51□□□□□ -0.09
SPG11-201ENST00000261866 SSBP05455 408 aaKnown RBP eCLIP14.5□□□□□ -0.09
SPG11-201ENST00000261866 CAVIN1Q6NZI2 390 aaKnown RBP14.5□□□□□ -0.09
SPG11-201ENST00000261866 BRD4O60885 1362 aaPredicted RBP14.5□□□□□ -0.09
SPG11-201ENST00000261866 PLCD4Q9BRC7 762 aa14.5□□□□□ -0.09
SPG11-201ENST00000261866 SLC52A1Q9NWF4 448 aa14.5□□□□□ -0.09
SPG11-201ENST00000261866 GPTP24298 496 aa14.5□□□□□ -0.09
SPG11-201ENST00000261866 IGHMBP2P38935 993 aaKnown RBP14.5□□□□□ -0.09
SPG11-201ENST00000261866 POGZQ7Z3K3 1410 aa14.5□□□□□ -0.09
SPG11-201ENST00000261866 NSD3Q9BZ95 1437 aa14.5□□□□□ -0.09
SPG11-201ENST00000261866 JARID2Q92833 1246 aaPredicted RBP14.49□□□□□ -0.09
SPG11-201ENST00000261866 NUCB2P80303 420 aa14.49□□□□□ -0.09
SPG11-201ENST00000261866 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
SPG11-201ENST00000261866 MATR3P43243 847 aaKnown RBP eCLIP14.49□□□□□ -0.09
SPG11-201ENST00000261866 TTLL12Q14166 644 aaPredicted RBP14.49□□□□□ -0.09
SPG11-201ENST00000261866 CCT4P50991 539 aaKnown RBP14.49□□□□□ -0.09
SPG11-201ENST00000261866 STK38Q15208 465 aa14.49□□□□□ -0.09
SPG11-201ENST00000261866 METTL24Q5JXM2 366 aa14.49□□□□□ -0.09
SPG11-201ENST00000261866 NACAP1Q9BZK3 213 aa14.49□□□□□ -0.09
SPG11-201ENST00000261866 KIAA1107Q9UPP5 1409 aa14.48□□□□□ -0.09
SPG11-201ENST00000261866 CHRNA2Q15822 529 aa14.48□□□□□ -0.09
SPG11-201ENST00000261866 CAGE1Q8TC20 777 aa14.48□□□□□ -0.09
SPG11-201ENST00000261866 PPM1FP49593 454 aaPredicted RBP14.48□□□□□ -0.09
SPG11-201ENST00000261866 HSP90AA2PQ14568 343 aaPredicted RBP14.48□□□□□ -0.09
SPG11-201ENST00000261866 EXOC6BQ9Y2D4 811 aa14.48□□□□□ -0.09
SPG11-201ENST00000261866 SPC24Q8NBT2 197 aa14.48□□□□□ -0.09
SPG11-201ENST00000261866 STARD3NLO95772 234 aa14.48□□□□□ -0.09
SPG11-201ENST00000261866 FBLN1P23142 703 aa14.48□□□□□ -0.09
SPG11-201ENST00000261866 AMOTL2Q9Y2J4 779 aa14.48□□□□□ -0.09
SPG11-201ENST00000261866 ECM2O94769 699 aaPredicted RBP14.47□□□□□ -0.09
SPG11-201ENST00000261866 STAC3Q96MF2 364 aa14.47□□□□□ -0.09
SPG11-201ENST00000261866 WDR70Q9NW82 654 aa14.47□□□□□ -0.09
SPG11-201ENST00000261866 EMILIN1Q9Y6C2 1016 aa14.47□□□□□ -0.09
SPG11-201ENST00000261866 POLA1P09884 1462 aaPredicted RBP14.47□□□□□ -0.09
SPG11-201ENST00000261866 FAM13BQ9NYF5 915 aa14.47□□□□□ -0.09
SPG11-201ENST00000261866 TANGO6Q9C0B7 1094 aa14.47□□□□□ -0.09
SPG11-201ENST00000261866 PNISRQ8TF01 805 aaKnown RBP14.47□□□□□ -0.09
SPG11-201ENST00000261866 MINDY4BA8MYZ0 360 aa14.47□□□□□ -0.09
SPG11-201ENST00000261866 TRMT1LQ7Z2T5 733 aaKnown RBP14.47□□□□□ -0.09
SPG11-201ENST00000261866 F6X3S4 739 aa14.46□□□□□ -0.09
SPG11-201ENST00000261866 CEP126Q9P2H0 1117 aa14.46□□□□□ -0.09
SPG11-201ENST00000261866 SOGA3Q5TF21 947 aa14.46□□□□□ -0.09
SPG11-201ENST00000261866 ZNF76P36508 570 aa14.46□□□□□ -0.09
SPG11-201ENST00000261866 DAPK1P53355 1430 aa14.46□□□□□ -0.09
SPG11-201ENST00000261866 CYP46A1Q9Y6A2 500 aa14.46□□□□□ -0.1
SPG11-201ENST00000261866 GRM1Q13255 1194 aa14.46□□□□□ -0.1
SPG11-201ENST00000261866 WDR78Q5VTH9 848 aa14.46□□□□□ -0.1
SPG11-201ENST00000261866 CD109Q6YHK3 1445 aa14.45□□□□□ -0.1
SPG11-201ENST00000261866 MAGEC2Q9UBF1 373 aaPredicted RBP14.45□□□□□ -0.1
SPG11-201ENST00000261866 SKAP1Q86WV1 359 aa14.45□□□□□ -0.1
SPG11-201ENST00000261866 DDX11Q96FC9 970 aa14.45□□□□□ -0.1
SPG11-201ENST00000261866 ACSBG1Q96GR2 724 aa14.45□□□□□ -0.1
SPG11-201ENST00000261866 ERICH3Q5RHP9 1530 aa14.45□□□□□ -0.1
SPG11-201ENST00000261866 DUSP27Q5VZP5 1158 aa14.45□□□□□ -0.1
SPG11-201ENST00000261866 HIP1O00291 1037 aa14.45□□□□□ -0.1
SPG11-201ENST00000261866 TRIM5Q9C035 493 aa14.45□□□□□ -0.1
SPG11-201ENST00000261866 KINO60870 393 aaKnown RBP14.45□□□□□ -0.1
SPG11-201ENST00000261866 EHBP1L1Q8N3D4 1523 aa14.45□□□□□ -0.1
SPG11-201ENST00000261866 TXLNAP40222 546 aa14.44□□□□□ -0.1
SPG11-201ENST00000261866 JAKMIP1Q96N16 626 aaKnown RBP14.44□□□□□ -0.1
SPG11-201ENST00000261866 HECW1Q76N89 1606 aa14.44□□□□□ -0.1
SPG11-201ENST00000261866 CCDC82Q8N4S0 544 aa14.44□□□□□ -0.1
SPG11-201ENST00000261866 ZBTB3Q9H5J0 574 aa14.44□□□□□ -0.1
SPG11-201ENST00000261866 TROQ12816 1431 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms