RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 PPP4R3BQ5MIZ7 849 aa19.44■□□□□ 0.7
SREBF1-201ENST00000261646 GPS2Q13227 327 aa19.44■□□□□ 0.7
SREBF1-201ENST00000261646 RRS1Q15050 365 aaKnown RBP19.44■□□□□ 0.7
SREBF1-201ENST00000261646 CCDC73Q6ZRK6 1079 aa19.44■□□□□ 0.7
SREBF1-201ENST00000261646 SLC4A2P04920 1241 aa19.43■□□□□ 0.7
SREBF1-201ENST00000261646 WAPLQ7Z5K2 1190 aa19.43■□□□□ 0.7
SREBF1-201ENST00000261646 CARD14Q9BXL6 1004 aa19.43■□□□□ 0.7
SREBF1-201ENST00000261646 CREBRFQ8IUR6 639 aa19.43■□□□□ 0.7
SREBF1-201ENST00000261646 ARGLU1Q9NWB6 273 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-201ENST00000261646 ZNF428Q96B54 188 aa19.42■□□□□ 0.7
SREBF1-201ENST00000261646 NUCB1Q02818 461 aa19.42■□□□□ 0.7
SREBF1-201ENST00000261646 RNF20Q5VTR2 975 aa19.42■□□□□ 0.7
SREBF1-201ENST00000261646 UBTFL1P0CB47 393 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-201ENST00000261646 DCTN1Q14203 1278 aa19.41■□□□□ 0.7
SREBF1-201ENST00000261646 GORABQ5T7V8 394 aa19.41■□□□□ 0.7
SREBF1-201ENST00000261646 C9orf78Q9NZ63 289 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-201ENST00000261646 SDF4Q9BRK5 362 aa19.41■□□□□ 0.7
SREBF1-201ENST00000261646 RPAP2Q8IXW5 612 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-201ENST00000261646 GNAI3P08754 354 aa19.4■□□□□ 0.7
SREBF1-201ENST00000261646 LRSAM1Q6UWE0 723 aa19.4■□□□□ 0.7
SREBF1-201ENST00000261646 EXOC6BQ9Y2D4 811 aa19.4■□□□□ 0.7
SREBF1-201ENST00000261646 KIAA0556O60303 1618 aa19.4■□□□□ 0.7
SREBF1-201ENST00000261646 GNAI2P04899 355 aa19.4■□□□□ 0.7
SREBF1-201ENST00000261646 FMNL2Q96PY5 1086 aa19.4■□□□□ 0.7
SREBF1-201ENST00000261646 TNMDQ9H2S6 317 aa19.4■□□□□ 0.7
SREBF1-201ENST00000261646 MAP4K4O95819 1239 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-201ENST00000261646 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-201ENST00000261646 ERICH4A6NGS2 130 aa19.39■□□□□ 0.69
SREBF1-201ENST00000261646 ADCY5O95622 1261 aa19.39■□□□□ 0.69
SREBF1-201ENST00000261646 LRRCC1Q9C099 1032 aa19.39■□□□□ 0.69
SREBF1-201ENST00000261646 CEBPZQ03701 1054 aaKnown RBP19.39■□□□□ 0.69
SREBF1-201ENST00000261646 CGNQ9P2M7 1197 aaKnown RBP19.39■□□□□ 0.69
SREBF1-201ENST00000261646 SAMD9Q5K651 1589 aa19.38■□□□□ 0.69
SREBF1-201ENST00000261646 FAM135AQ9P2D6 1515 aa19.38■□□□□ 0.69
SREBF1-201ENST00000261646 ALDH1L2Q3SY69 923 aa19.38■□□□□ 0.69
SREBF1-201ENST00000261646 CNTROBQ8N137 903 aa19.38■□□□□ 0.69
SREBF1-201ENST00000261646 SYCP2Q9BX26 1530 aa19.38■□□□□ 0.69
SREBF1-201ENST00000261646 ADAMTS12P58397 1594 aa19.38■□□□□ 0.69
SREBF1-201ENST00000261646 IDI1Q13907 227 aa19.38■□□□□ 0.69
SREBF1-201ENST00000261646 FILIP1Q7Z7B0 1213 aa19.38■□□□□ 0.69
SREBF1-201ENST00000261646 FCHSD2O94868 740 aa19.37■□□□□ 0.69
SREBF1-201ENST00000261646 PDCP20941 246 aa19.37■□□□□ 0.69
SREBF1-201ENST00000261646 KRT85P78386 507 aa19.37■□□□□ 0.69
SREBF1-201ENST00000261646 HCLS1P14317 486 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-201ENST00000261646 IL1RAPL2Q9NP60 686 aa19.37■□□□□ 0.69
SREBF1-201ENST00000261646 CCDC183Q5T5S1 534 aa19.36■□□□□ 0.69
SREBF1-201ENST00000261646 FBXO31Q5XUX0 539 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-201ENST00000261646 LARP1BQ659C4 914 aaKnown RBP19.36■□□□□ 0.69
SREBF1-201ENST00000261646 SULT6B1Q6IMI4 303 aa19.36■□□□□ 0.69
SREBF1-201ENST00000261646 FERMT3Q86UX7 667 aa19.36■□□□□ 0.69
SREBF1-201ENST00000261646 TTC12Q9H892 705 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-201ENST00000261646 SCAF11Q99590 1463 aaKnown RBP19.36■□□□□ 0.69
SREBF1-201ENST00000261646 NOS1P29475 1434 aa19.36■□□□□ 0.69
SREBF1-201ENST00000261646 CAMK4Q16566 473 aa19.36■□□□□ 0.69
SREBF1-201ENST00000261646 NUP62CLQ9H1M0 184 aa19.35■□□□□ 0.69
SREBF1-201ENST00000261646 TRAPPC8Q9Y2L5 1435 aa19.35■□□□□ 0.69
SREBF1-201ENST00000261646 NOLC1Q14978 699 aaKnown RBP eCLIP19.35■□□□□ 0.69
SREBF1-201ENST00000261646 PRIMPOLQ96LW4 560 aa19.35■□□□□ 0.69
SREBF1-201ENST00000261646 DNMT1P26358 1616 aaKnown RBP19.35■□□□□ 0.69
SREBF1-201ENST00000261646 KIF21AQ7Z4S6 1674 aa19.35■□□□□ 0.69
SREBF1-201ENST00000261646 C16orf45Q96MC5 204 aaPredicted RBP19.35■□□□□ 0.69
SREBF1-201ENST00000261646 HS1BP3Q53T59 392 aa19.34■□□□□ 0.69
SREBF1-201ENST00000261646 MIS18AQ9NYP9 233 aa19.34■□□□□ 0.69
SREBF1-201ENST00000261646 GAS2L3Q86XJ1 694 aa19.34■□□□□ 0.69
SREBF1-201ENST00000261646 CLASRPQ8N2M8 674 aaKnown RBP19.34■□□□□ 0.69
SREBF1-201ENST00000261646 RBSNQ9H1K0 784 aa19.34■□□□□ 0.69
SREBF1-201ENST00000261646 NFE2L2Q16236 605 aa19.34■□□□□ 0.69
SREBF1-201ENST00000261646 HSP90AB4PQ58FF6 505 aa19.34■□□□□ 0.69
SREBF1-201ENST00000261646 LARP6Q9BRS8 491 aaKnown RBP19.34■□□□□ 0.69
SREBF1-201ENST00000261646 ZNF330Q9Y3S2 320 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-201ENST00000261646 KINO60870 393 aaKnown RBP19.33■□□□□ 0.69
SREBF1-201ENST00000261646 IGSF3O75054 1194 aa19.33■□□□□ 0.69
SREBF1-201ENST00000261646 CYP46A1Q9Y6A2 500 aa19.33■□□□□ 0.68
SREBF1-201ENST00000261646 EID1Q9Y6B2 187 aa19.33■□□□□ 0.68
SREBF1-201ENST00000261646 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.68
SREBF1-201ENST00000261646 SMC2O95347 1197 aa19.33■□□□□ 0.68
SREBF1-201ENST00000261646 ZGPATQ8N5A5 531 aaKnown RBP19.33■□□□□ 0.68
SREBF1-201ENST00000261646 CCDC34Q96HJ3 373 aa19.33■□□□□ 0.68
SREBF1-201ENST00000261646 EMILIN1Q9Y6C2 1016 aa19.33■□□□□ 0.68
SREBF1-201ENST00000261646 FSD2A1L4K1 749 aa19.32■□□□□ 0.68
SREBF1-201ENST00000261646 FAM177BA6PVY3 158 aa19.32■□□□□ 0.68
SREBF1-201ENST00000261646 STK3Q13188 491 aa19.32■□□□□ 0.68
SREBF1-201ENST00000261646 G3BP1Q13283 466 aaKnown RBP eCLIP19.32■□□□□ 0.68
SREBF1-201ENST00000261646 NOL7Q9UMY1 257 aaKnown RBP19.32■□□□□ 0.68
SREBF1-201ENST00000261646 MAP3K11Q16584 847 aa19.32■□□□□ 0.68
SREBF1-201ENST00000261646 PSMA5P28066 241 aa19.31■□□□□ 0.68
SREBF1-201ENST00000261646 NAT10Q9H0A0 1025 aaKnown RBP19.31■□□□□ 0.68
SREBF1-201ENST00000261646 TEFQ10587 303 aa19.31■□□□□ 0.68
SREBF1-201ENST00000261646 TMX3Q96JJ7 454 aa19.31■□□□□ 0.68
SREBF1-201ENST00000261646 AEBP1Q8IUX7 1158 aa19.31■□□□□ 0.68
SREBF1-201ENST00000261646 CWC27Q6UX04 472 aaKnown RBP19.3■□□□□ 0.68
SREBF1-201ENST00000261646 RBM25P49756 843 aaKnown RBP19.3■□□□□ 0.68
SREBF1-201ENST00000261646 TTC22Q5TAA0 569 aa19.3■□□□□ 0.68
SREBF1-201ENST00000261646 TNNT1P13805 278 aa19.3■□□□□ 0.68
SREBF1-201ENST00000261646 A2MP01023 1474 aa19.3■□□□□ 0.68
SREBF1-201ENST00000261646 CCT4P50991 539 aaKnown RBP19.29■□□□□ 0.68
SREBF1-201ENST00000261646 CCDC83Q8IWF9 413 aa19.29■□□□□ 0.68
SREBF1-201ENST00000261646 JAKMIP1Q96N16 626 aaKnown RBP19.29■□□□□ 0.68
SREBF1-201ENST00000261646 ABCC11Q96J66 1382 aa19.29■□□□□ 0.68
SREBF1-201ENST00000261646 CPLX1O14810 134 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms