RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 HNRNPUQ00839 825 aaKnown RBP eCLIP24.76■■□□□ 1.55
COL4A3BP-201ENST00000261415 ADAMTS8Q9UP79 889 aa24.76■■□□□ 1.55
COL4A3BP-201ENST00000261415 LMOD2Q6P5Q4 547 aa24.75■■□□□ 1.55
COL4A3BP-201ENST00000261415 BLMP54132 1417 aaPredicted RBP24.75■■□□□ 1.55
COL4A3BP-201ENST00000261415 MED1Q15648 1581 aaPredicted RBP24.74■■□□□ 1.55
COL4A3BP-201ENST00000261415 SOS2Q07890 1332 aaPredicted RBP24.73■■□□□ 1.55
COL4A3BP-201ENST00000261415 USP19O94966 1318 aa24.72■■□□□ 1.55
COL4A3BP-201ENST00000261415 MAP3K19Q56UN5 1328 aa24.72■■□□□ 1.55
COL4A3BP-201ENST00000261415 SPATA31A3Q5VYP0 1347 aa24.72■■□□□ 1.55
COL4A3BP-201ENST00000261415 AHDC1Q5TGY3 1603 aaPredicted RBP24.71■■□□□ 1.55
COL4A3BP-201ENST00000261415 IQSEC2Q5JU85 1478 aa24.71■■□□□ 1.55
COL4A3BP-201ENST00000261415 DIAPH1O60610 1272 aaKnown RBP24.7■■□□□ 1.54
COL4A3BP-201ENST00000261415 ABCA3Q99758 1704 aa24.69■■□□□ 1.54
COL4A3BP-201ENST00000261415 ARHGEF10O15013 1369 aa24.69■■□□□ 1.54
COL4A3BP-201ENST00000261415 KCNH5Q8NCM2 988 aa24.69■■□□□ 1.54
COL4A3BP-201ENST00000261415 RSPH6AQ9H0K4 717 aa24.68■■□□□ 1.54
COL4A3BP-201ENST00000261415 FLT4P35916 1363 aa24.67■■□□□ 1.54
COL4A3BP-201ENST00000261415 NUDCQ9Y266 331 aa24.67■■□□□ 1.54
COL4A3BP-201ENST00000261415 PHLPP1O60346 1717 aa24.67■■□□□ 1.54
COL4A3BP-201ENST00000261415 KIF24Q5T7B8 1368 aa24.66■■□□□ 1.54
COL4A3BP-201ENST00000261415 RGPD5Q99666 1765 aa24.66■■□□□ 1.54
COL4A3BP-201ENST00000261415 RGPD1P0DJD0 1748 aa24.66■■□□□ 1.54
COL4A3BP-201ENST00000261415 B4GALNT3Q6L9W6 998 aa24.66■■□□□ 1.54
COL4A3BP-201ENST00000261415 PLEKHG5O94827 1062 aa24.65■■□□□ 1.54
COL4A3BP-201ENST00000261415 GCP02774 474 aa24.65■■□□□ 1.54
COL4A3BP-201ENST00000261415 GLIPR1L2Q4G1C9 344 aa24.65■■□□□ 1.54
COL4A3BP-201ENST00000261415 TOM1O60784 492 aa24.65■■□□□ 1.54
COL4A3BP-201ENST00000261415 U2SURPO15042 1029 aaKnown RBP24.64■■□□□ 1.53
COL4A3BP-201ENST00000261415 U2AF1L5P0DN76 240 aaPredicted RBP24.64■■□□□ 1.53
COL4A3BP-201ENST00000261415 AMPHP49418 695 aa24.64■■□□□ 1.53
COL4A3BP-201ENST00000261415 U2AF1Q01081 240 aaKnown RBP eCLIP24.64■■□□□ 1.533e-9■■■□□ 19
COL4A3BP-201ENST00000261415 RTL1A6NKG5 1358 aa24.63■■□□□ 1.53
COL4A3BP-201ENST00000261415 HSP90AB2PQ58FF8 381 aa24.63■■□□□ 1.53
COL4A3BP-201ENST00000261415 IL13P35225 146 aa24.63■■□□□ 1.53
COL4A3BP-201ENST00000261415 ZBED9Q6R2W3 1325 aa24.62■■□□□ 1.53
COL4A3BP-201ENST00000261415 SENP3-EIF4A1A0A087X0R7 540 aa24.62■■□□□ 1.53
COL4A3BP-201ENST00000261415 CCDC146Q8IYE0 955 aa24.61■■□□□ 1.53
COL4A3BP-201ENST00000261415 COL16A1Q07092 1604 aaPredicted RBP24.61■■□□□ 1.53
COL4A3BP-201ENST00000261415 HOXC9P31274 260 aa24.6■■□□□ 1.53
COL4A3BP-201ENST00000261415 EIF4A2Q14240 407 aaKnown RBP24.6■■□□□ 1.53
COL4A3BP-201ENST00000261415 RGPD2P0DJD1 1756 aa24.59■■□□□ 1.53
COL4A3BP-201ENST00000261415 CABLES1Q8TDN4 633 aa24.59■■□□□ 1.53
COL4A3BP-201ENST00000261415 COL18A1P39060 1754 aa24.58■■□□□ 1.53
COL4A3BP-201ENST00000261415 UBAP1LF5GYI3 381 aa24.58■■□□□ 1.53
COL4A3BP-201ENST00000261415 ARHGEF25Q86VW2 580 aa24.58■■□□□ 1.53
COL4A3BP-201ENST00000261415 CERKQ8TCT0 537 aa24.58■■□□□ 1.53
COL4A3BP-201ENST00000261415 COL22A1Q8NFW1 1626 aaPredicted RBP24.58■■□□□ 1.52
COL4A3BP-201ENST00000261415 NEFMP07197 916 aa24.58■■□□□ 1.52
COL4A3BP-201ENST00000261415 PIP4K2BP78356 416 aa24.57■■□□□ 1.52
COL4A3BP-201ENST00000261415 IP6K1Q92551 441 aa24.56■■□□□ 1.52
COL4A3BP-201ENST00000261415 ZBTB7CA1YPR0 619 aa24.55■■□□□ 1.52
COL4A3BP-201ENST00000261415 RUNDC1Q96C34 613 aa24.55■■□□□ 1.52
COL4A3BP-201ENST00000261415 ZC3H6P61129 1189 aaKnown RBP24.54■■□□□ 1.52
COL4A3BP-201ENST00000261415 LRRC59Q96AG4 307 aaKnown RBP24.54■■□□□ 1.52
COL4A3BP-201ENST00000261415 ABCC6O95255 1503 aa24.53■■□□□ 1.52
COL4A3BP-201ENST00000261415 APAF1O14727 1248 aa24.52■■□□□ 1.52
COL4A3BP-201ENST00000261415 DLG5Q8TDM6 1919 aa24.51■■□□□ 1.51
COL4A3BP-201ENST00000261415 FCHSD2O94868 740 aa24.51■■□□□ 1.51
COL4A3BP-201ENST00000261415 HMOX1P09601 288 aa24.51■■□□□ 1.51
COL4A3BP-201ENST00000261415 PLEKHF1Q96S99 279 aa24.51■■□□□ 1.51
COL4A3BP-201ENST00000261415 CPDO75976 1380 aa24.51■■□□□ 1.51
COL4A3BP-201ENST00000261415 PNNQ9H307 717 aaKnown RBP24.49■■□□□ 1.51
COL4A3BP-201ENST00000261415 KIAA0232Q92628 1395 aa24.49■■□□□ 1.51
COL4A3BP-201ENST00000261415 FAM208AQ9UK61 1670 aaKnown RBP24.49■■□□□ 1.51
COL4A3BP-201ENST00000261415 TCP11L2Q8N4U5 519 aa24.48■■□□□ 1.51
COL4A3BP-201ENST00000261415 LTV1Q96GA3 475 aaPredicted RBP24.48■■□□□ 1.51
COL4A3BP-201ENST00000261415 LMO7Q8WWI1 1683 aa24.48■■□□□ 1.51
COL4A3BP-201ENST00000261415 CAMTA1Q9Y6Y1 1673 aa24.48■■□□□ 1.51
COL4A3BP-201ENST00000261415 PRKAR2BP31323 418 aa24.47■■□□□ 1.51
COL4A3BP-201ENST00000261415 IGSF1Q8N6C5 1336 aa24.47■■□□□ 1.51
COL4A3BP-201ENST00000261415 MAPK8IP3Q9UPT6 1336 aa24.47■■□□□ 1.51
COL4A3BP-201ENST00000261415 BRPF3Q9ULD4 1205 aa24.47■■□□□ 1.51
COL4A3BP-201ENST00000261415 HAP1P54257 671 aaPredicted RBP24.46■■□□□ 1.51
COL4A3BP-201ENST00000261415 SULT6B1Q6IMI4 303 aa24.46■■□□□ 1.51
COL4A3BP-201ENST00000261415 EYA1Q99502 592 aa24.46■■□□□ 1.51
COL4A3BP-201ENST00000261415 AXIN2Q9Y2T1 843 aa24.46■■□□□ 1.51
COL4A3BP-201ENST00000261415 AEBP1Q8IUX7 1158 aa24.46■■□□□ 1.51
COL4A3BP-201ENST00000261415 GSE1Q14687 1217 aa24.45■■□□□ 1.5
COL4A3BP-201ENST00000261415 KDRP35968 1356 aa24.45■■□□□ 1.5
COL4A3BP-201ENST00000261415 NGEFQ8N5V2 710 aa24.44■■□□□ 1.5
COL4A3BP-201ENST00000261415 CHRNA2Q15822 529 aa24.43■■□□□ 1.5
COL4A3BP-201ENST00000261415 RRP7AQ9Y3A4 280 aaKnown RBP24.42■■□□□ 1.5
COL4A3BP-201ENST00000261415 ANKRD24Q8TF21 1146 aa24.42■■□□□ 1.5
COL4A3BP-201ENST00000261415 ZNF521Q96K83 1311 aa24.41■■□□□ 1.5
COL4A3BP-201ENST00000261415 FAM43AQ8N2R8 423 aa24.41■■□□□ 1.5
COL4A3BP-201ENST00000261415 ERBB3P21860 1342 aa24.41■■□□□ 1.5
COL4A3BP-201ENST00000261415 NEUROD2Q15784 382 aa24.41■■□□□ 1.5
COL4A3BP-201ENST00000261415 PRDM11Q9NQV5 511 aa24.41■■□□□ 1.5
COL4A3BP-201ENST00000261415 PHACTR3Q96KR7 559 aa24.4■■□□□ 1.5
COL4A3BP-201ENST00000261415 COL14A1Q05707 1796 aaKnown RBP24.4■■□□□ 1.5
COL4A3BP-201ENST00000261415 TMPOP42166 694 aaKnown RBP24.39■■□□□ 1.5
COL4A3BP-201ENST00000261415 NBPF6Q5VWK0 638 aa24.38■■□□□ 1.49
COL4A3BP-201ENST00000261415 NBPF4Q96M43 638 aa24.38■■□□□ 1.49
COL4A3BP-201ENST00000261415 NCAPD2Q15021 1401 aa24.38■■□□□ 1.49
COL4A3BP-201ENST00000261415 PDE3BQ13370 1112 aa24.37■■□□□ 1.49
COL4A3BP-201ENST00000261415 NCBP3Q53F19 620 aaKnown RBP24.37■■□□□ 1.49
COL4A3BP-201ENST00000261415 USHBP1Q8N6Y0 703 aa24.36■■□□□ 1.49
COL4A3BP-201ENST00000261415 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
COL4A3BP-201ENST00000261415 CCDC27Q2M243 656 aa24.36■■□□□ 1.49
COL4A3BP-201ENST00000261415 WWC1Q8IX03 1113 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms