RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 PDCL2Q8N4E4 241 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 SPC24Q8NBT2 197 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 RBM33Q96EV2 1170 aaKnown RBP5.68□□□□□ -1.5
RC3H1-201ENST00000258349 CFAP45Q9UL16 551 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 RNF214Q8ND24 703 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 NECTIN2Q92692 538 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 CYP46A1Q9Y6A2 500 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 MYO5CQ9NQX4 1742 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 GRIN2BQ13224 1484 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 PRPF40AO75400 957 aaKnown RBP5.68□□□□□ -1.5
RC3H1-201ENST00000258349 STK38Q15208 465 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 DEF6Q9H4E7 631 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 SERPINC1P01008 464 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 KRT85P78386 507 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 MAP9Q49MG5 647 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 ENOX2Q16206 610 aaKnown RBP5.68□□□□□ -1.5
RC3H1-201ENST00000258349 WASHC4Q2M389 1173 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 SLC26A8Q96RN1 970 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 CLASRPQ8N2M8 674 aaKnown RBP5.68□□□□□ -1.5
RC3H1-201ENST00000258349 LRRCC1Q9C099 1032 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 EZRP15311 586 aaKnown RBP5.67□□□□□ -1.5
RC3H1-201ENST00000258349 NEK4P51957 841 aa5.67□□□□□ -1.5
RC3H1-201ENST00000258349 ZFYVE27Q5T4F4 411 aa5.67□□□□□ -1.5
RC3H1-201ENST00000258349 GAS2L2Q8NHY3 880 aa5.67□□□□□ -1.5
RC3H1-201ENST00000258349 GNL3LQ9NVN8 582 aaKnown RBP5.67□□□□□ -1.5
RC3H1-201ENST00000258349 CCDC181Q5TID7 509 aa5.67□□□□□ -1.5
RC3H1-201ENST00000258349 MAP3K1Q13233 1512 aa5.67□□□□□ -1.5
RC3H1-201ENST00000258349 FIBPO43427 364 aa5.67□□□□□ -1.5
RC3H1-201ENST00000258349 TRIM22Q8IYM9 498 aa5.67□□□□□ -1.5
RC3H1-201ENST00000258349 TCHHQ07283 1943 aa5.67□□□□□ -1.5
RC3H1-201ENST00000258349 DDX11Q96FC9 970 aa5.67□□□□□ -1.5
RC3H1-201ENST00000258349 WDR63Q8IWG1 891 aa5.67□□□□□ -1.5
RC3H1-201ENST00000258349 ME1P48163 572 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 WWC2Q6AWC2 1192 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 JPH4Q96JJ6 628 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 BACH2Q9BYV9 841 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 RAPGEF6Q8TEU7 1601 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 CAMSAP2Q08AD1 1489 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 SMTNL1A8MU46 457 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 NOB1Q9ULX3 412 aaKnown RBP5.66□□□□□ -1.5
RC3H1-201ENST00000258349 NEUROD6Q96NK8 337 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 FAM107BQ9H098 131 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 CACNA1FO60840 1977 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 HMOX1P09601 288 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 CEP57L1Q8IYX8 460 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 RAD54L2Q9Y4B4 1467 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 HSP90AB3PQ58FF7 597 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 CCDC148Q8NFR7 591 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 TTC39AQ5SRH9 613 aa5.66□□□□□ -1.5
RC3H1-201ENST00000258349 ZNF397Q8NF99 534 aaPredicted RBP5.66□□□□□ -1.5
RC3H1-201ENST00000258349 KRT18P05783 430 aaKnown RBP5.66□□□□□ -1.5
RC3H1-201ENST00000258349 GPRASP1Q5JY77 1395 aa5.65□□□□□ -1.5
RC3H1-201ENST00000258349 KRT32Q14532 448 aa5.65□□□□□ -1.5
RC3H1-201ENST00000258349 ZSCAN31Q96LW9 406 aaPredicted RBP5.65□□□□□ -1.5
RC3H1-201ENST00000258349 NUTM2FA1L443 756 aa5.65□□□□□ -1.5
RC3H1-201ENST00000258349 WASF1Q92558 559 aa5.65□□□□□ -1.5
RC3H1-201ENST00000258349 ADAMTS8Q9UP79 889 aa5.65□□□□□ -1.5
RC3H1-201ENST00000258349 PEG3Q9GZU2 1588 aa5.65□□□□□ -1.5
RC3H1-201ENST00000258349 AQRO60306 1485 aaKnown RBP eCLIP5.65□□□□□ -1.519e-7■■■■□ 19.7
RC3H1-201ENST00000258349 BRPF1P55201 1214 aaPredicted RBP5.65□□□□□ -1.51
RC3H1-201ENST00000258349 GBP3Q9H0R5 595 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 CEP131Q9UPN4 1083 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 PDZRN3Q9UPQ7 1066 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 CCDC69A6NI79 296 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 PPP2R1AP30153 589 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 KRI1Q8N9T8 703 aaKnown RBP5.65□□□□□ -1.51
RC3H1-201ENST00000258349 DESP17661 470 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 MVPQ14764 893 aaKnown RBP5.65□□□□□ -1.51
RC3H1-201ENST00000258349 CCDC91Q7Z6B0 441 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 SPATA32Q96LK8 384 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 NACAP1Q9BZK3 213 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 FBXO3Q9UK99 471 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 FYB1O15117 783 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 RBM10P98175 930 aaKnown RBP5.65□□□□□ -1.51
RC3H1-201ENST00000258349 CCDC183Q5T5S1 534 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 ZSCAN25Q6NSZ9 544 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 KIAA1328Q86T90 577 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 CENPHQ9H3R5 247 aa5.65□□□□□ -1.51
RC3H1-201ENST00000258349 CGNQ9P2M7 1197 aaKnown RBP5.65□□□□□ -1.51
RC3H1-201ENST00000258349 JAKMIP3Q5VZ66 844 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 CHD1LQ86WJ1 897 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 BCL11BQ9C0K0 894 aaPredicted RBP5.64□□□□□ -1.51
RC3H1-201ENST00000258349 MAP3K11Q16584 847 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 NUP62CLQ9H1M0 184 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 NOL7Q9UMY1 257 aaKnown RBP5.64□□□□□ -1.51
RC3H1-201ENST00000258349 NCAPD3P42695 1498 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 ESPNB1AK53 854 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 NEFHP12036 1026 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 RAPGEF4Q8WZA2 1011 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 CASQ1P31415 396 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 LAMC3Q9Y6N6 1575 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 MRC2Q9UBG0 1479 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 CCDC158Q5M9N0 1113 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 ZSCAN30Q86W11 494 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 DYDC1Q8WWB3 177 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 POTEB2H3BUK9 544 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 EPB41L2O43491 1005 aaKnown RBP5.64□□□□□ -1.51
RC3H1-201ENST00000258349 SYTL4Q96C24 671 aaPredicted RBP5.64□□□□□ -1.51
RC3H1-201ENST00000258349 FMNL2Q96PY5 1086 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 PPP6R1Q9UPN7 881 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms