RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 PPP1R12BO60237 982 aaPredicted RBP10.16□□□□□ -0.78
USP6-201ENST00000250066 TAOK3Q9H2K8 898 aa10.16□□□□□ -0.78
USP6-201ENST00000250066 FOXD1Q16676 465 aa10.16□□□□□ -0.78
USP6-201ENST00000250066 RIC3Q7Z5B4 369 aa10.16□□□□□ -0.78
USP6-201ENST00000250066 MPHOSPH10O00566 681 aaKnown RBP10.16□□□□□ -0.78
USP6-201ENST00000250066 PABPN1LA6NDY0 278 aaKnown RBP10.16□□□□□ -0.78
USP6-201ENST00000250066 HIP1O00291 1037 aa10.16□□□□□ -0.78
USP6-201ENST00000250066 EXOC6Q8TAG9 804 aa10.15□□□□□ -0.78
USP6-201ENST00000250066 FSD1Q9BTV5 496 aa10.15□□□□□ -0.78
USP6-201ENST00000250066 MNAT1P51948 309 aa10.15□□□□□ -0.78
USP6-201ENST00000250066 SSBP05455 408 aaKnown RBP eCLIP10.15□□□□□ -0.78
USP6-201ENST00000250066 FAM114A1Q8IWE2 563 aa10.15□□□□□ -0.78
USP6-201ENST00000250066 RAB3IL1Q8TBN0 382 aa10.15□□□□□ -0.78
USP6-201ENST00000250066 FBF1Q8TES7 1133 aa10.15□□□□□ -0.78
USP6-201ENST00000250066 CTNNBL1Q8WYA6 563 aaPredicted RBP10.15□□□□□ -0.78
USP6-201ENST00000250066 SPA17Q15506 151 aa10.15□□□□□ -0.79
USP6-201ENST00000250066 LARP1Q6PKG0 1096 aaKnown RBP10.15□□□□□ -0.79
USP6-201ENST00000250066 FSD2A1L4K1 749 aa10.15□□□□□ -0.79
USP6-201ENST00000250066 NEK4P51957 841 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 CDC45O75419 566 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 DDX46Q7L014 1031 aaKnown RBP10.14□□□□□ -0.79
USP6-201ENST00000250066 CEP164Q9UPV0 1460 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 SETD5Q9C0A6 1442 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 KIF3CO14782 793 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 CCDC178Q5BJE1 867 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 VPS36Q86VN1 386 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 MYBBP1AQ9BQG0 1328 aaKnown RBP10.14□□□□□ -0.79
USP6-201ENST00000250066 CASQ1P31415 396 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 MPNDQ8N594 471 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 MACROD2A1Z1Q3 448 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 CTNNA2P26232 953 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 SSX2IPQ9Y2D8 614 aa10.14□□□□□ -0.79
USP6-201ENST00000250066 KRT85P78386 507 aa10.13□□□□□ -0.79
USP6-201ENST00000250066 KIF2AO00139 706 aaPredicted RBP10.13□□□□□ -0.79
USP6-201ENST00000250066 KIF5CO60282 957 aa10.13□□□□□ -0.79
USP6-201ENST00000250066 ANKRD1Q15327 319 aa10.13□□□□□ -0.79
USP6-201ENST00000250066 SMTNL1A8MU46 457 aa10.13□□□□□ -0.79
USP6-201ENST00000250066 CGNQ9P2M7 1197 aaKnown RBP10.13□□□□□ -0.79
USP6-201ENST00000250066 FILIP1Q7Z7B0 1213 aa10.13□□□□□ -0.79
USP6-201ENST00000250066 CEP57L1Q8IYX8 460 aa10.13□□□□□ -0.79
USP6-201ENST00000250066 SREK1Q8WXA9 508 aaKnown RBP10.13□□□□□ -0.79
USP6-201ENST00000250066 TSNARE1Q96NA8 513 aa10.13□□□□□ -0.79
USP6-201ENST00000250066 PPP1R14CQ8TAE6 165 aa10.13□□□□□ -0.79
USP6-201ENST00000250066 BRPF3Q9ULD4 1205 aa10.13□□□□□ -0.79
USP6-201ENST00000250066 NOL7Q9UMY1 257 aaKnown RBP10.13□□□□□ -0.79
USP6-201ENST00000250066 KIF18AQ8NI77 898 aa10.12□□□□□ -0.79
USP6-201ENST00000250066 POLR3GO15318 223 aaPredicted RBP10.12□□□□□ -0.79
USP6-201ENST00000250066 NOL3O60936 208 aaKnown RBP10.12□□□□□ -0.79
USP6-201ENST00000250066 UBTFL1P0CB47 393 aaPredicted RBP10.12□□□□□ -0.79
USP6-201ENST00000250066 RAI14Q9P0K7 980 aa10.12□□□□□ -0.79
USP6-201ENST00000250066 CCDC6Q16204 474 aa10.12□□□□□ -0.79
USP6-201ENST00000250066 CBX1P83916 185 aa10.12□□□□□ -0.79
USP6-201ENST00000250066 CFAP100Q494V2 611 aa10.12□□□□□ -0.79
USP6-201ENST00000250066 WDR66Q8TBY9 1149 aa10.12□□□□□ -0.79
USP6-201ENST00000250066 UPF3BQ9BZI7 483 aaKnown RBP10.12□□□□□ -0.79
USP6-201ENST00000250066 PTPN14Q15678 1187 aa10.12□□□□□ -0.79
USP6-201ENST00000250066 DNAAF4Q8WXU2 420 aa10.12□□□□□ -0.79
USP6-201ENST00000250066 CCDC69A6NI79 296 aa10.12□□□□□ -0.79
USP6-201ENST00000250066 TMEM87AQ8NBN3 555 aa10.12□□□□□ -0.79
USP6-201ENST00000250066 PAFAH1B1P43034 410 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 GTF2A1P52655 376 aaPredicted RBP10.11□□□□□ -0.79
USP6-201ENST00000250066 TRERF1Q96PN7 1200 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 AIMP1Q12904 312 aaKnown RBP10.11□□□□□ -0.79
USP6-201ENST00000250066 HLTFQ14527 1009 aaKnown RBP eCLIP10.11□□□□□ -0.79
USP6-201ENST00000250066 CCDC150Q8NCX0 1101 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 PRDM10Q9NQV6 1147 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 ZNF76P36508 570 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 CCDC57Q2TAC2 916 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 CFAP58Q5T655 872 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 ARHGAP35Q9NRY4 1499 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 APBB1IPQ7Z5R6 666 aaPredicted RBP10.11□□□□□ -0.79
USP6-201ENST00000250066 SPDYE4A6NLX3 237 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 CTR9Q6PD62 1173 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 IKBKGQ9Y6K9 419 aa10.11□□□□□ -0.79
USP6-201ENST00000250066 GTPBP4Q9BZE4 634 aaKnown RBP10.11□□□□□ -0.79
USP6-201ENST00000250066 NUP155O75694 1391 aa10.1□□□□□ -0.79
USP6-201ENST00000250066 ZSCAN12O43309 604 aa10.1□□□□□ -0.79
USP6-201ENST00000250066 CACNA2D4Q7Z3S7 1137 aa10.1□□□□□ -0.79
USP6-201ENST00000250066 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
USP6-201ENST00000250066 NAA15Q9BXJ9 866 aaKnown RBP10.1□□□□□ -0.79
USP6-201ENST00000250066 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.1□□□□□ -0.79
USP6-201ENST00000250066 WDR33Q9C0J8 1336 aaKnown RBP10.1□□□□□ -0.79
USP6-201ENST00000250066 PRKCSHP14314 528 aaPredicted RBP10.1□□□□□ -0.79
USP6-201ENST00000250066 HSPA4P34932 840 aa10.1□□□□□ -0.79
USP6-201ENST00000250066 FERMT1Q9BQL6 677 aa10.1□□□□□ -0.79
USP6-201ENST00000250066 GNL3LQ9NVN8 582 aaKnown RBP10.1□□□□□ -0.79
USP6-201ENST00000250066 CEP83Q9Y592 693 aa10.1□□□□□ -0.79
USP6-201ENST00000250066 RIPK4P57078 832 aa10.1□□□□□ -0.79
USP6-201ENST00000250066 SMARCC1Q92922 1105 aaPredicted RBP10.1□□□□□ -0.79
USP6-201ENST00000250066 WDR70Q9NW82 654 aa10.1□□□□□ -0.79
USP6-201ENST00000250066 KIF4BQ2VIQ3 1234 aa10.1□□□□□ -0.79
USP6-201ENST00000250066 TSPYL4Q9UJ04 414 aa10.1□□□□□ -0.79
USP6-201ENST00000250066 ARL1P40616 181 aaPredicted RBP10.09□□□□□ -0.79
USP6-201ENST00000250066 PSMC4P43686 418 aa10.09□□□□□ -0.79
USP6-201ENST00000250066 GRPEL1Q9HAV7 217 aa10.09□□□□□ -0.79
USP6-201ENST00000250066 FEZ2Q9UHY8 353 aaPredicted RBP10.09□□□□□ -0.79
USP6-201ENST00000250066 ABCC8Q09428 1581 aa10.09□□□□□ -0.79
USP6-201ENST00000250066 ZBED9Q6R2W3 1325 aa10.09□□□□□ -0.79
USP6-201ENST00000250066 CDKL5O76039 1030 aa10.09□□□□□ -0.79
USP6-201ENST00000250066 MRPS9P82933 396 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms