RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 FRAT1Q92837 279 aaPredicted RBP23.93■■□□□ 1.42
TUBA4A-201ENST00000248437 RGPD1P0DJD0 1748 aa23.93■■□□□ 1.42
TUBA4A-201ENST00000248437 EXOSC9Q06265 439 aaKnown RBP23.92■■□□□ 1.42
TUBA4A-201ENST00000248437 PIK3C2AO00443 1686 aa23.92■■□□□ 1.42
TUBA4A-201ENST00000248437 CALD1Q05682 793 aaKnown RBP23.92■■□□□ 1.42
TUBA4A-201ENST00000248437 PROSER2Q86WR7 435 aaPredicted RBP23.92■■□□□ 1.42
TUBA4A-201ENST00000248437 PHACTR3Q96KR7 559 aa23.92■■□□□ 1.42
TUBA4A-201ENST00000248437 C14orf37Q86TY3 774 aa23.91■■□□□ 1.42
TUBA4A-201ENST00000248437 PANK1Q8TE04 598 aa23.91■■□□□ 1.42
TUBA4A-201ENST00000248437 NGDNQ8NEJ9 315 aaKnown RBP23.91■■□□□ 1.42
TUBA4A-201ENST00000248437 CLUAP1Q96AJ1 413 aa23.89■■□□□ 1.42
TUBA4A-201ENST00000248437 COG6Q9Y2V7 657 aa23.89■■□□□ 1.42
TUBA4A-201ENST00000248437 LMOD3Q0VAK6 560 aa23.88■■□□□ 1.41
TUBA4A-201ENST00000248437 BCL2L13Q9BXK5 485 aa23.88■■□□□ 1.41
TUBA4A-201ENST00000248437 EIF4A2Q14240 407 aaKnown RBP23.88■■□□□ 1.41
TUBA4A-201ENST00000248437 ZKSCAN2Q63HK3 967 aa23.87■■□□□ 1.41
TUBA4A-201ENST00000248437 MARF1Q9Y4F3 1742 aaKnown RBP23.86■■□□□ 1.41
TUBA4A-201ENST00000248437 ZNF428Q96B54 188 aa23.85■■□□□ 1.41
TUBA4A-201ENST00000248437 SMC4Q9NTJ3 1288 aa23.85■■□□□ 1.41
TUBA4A-201ENST00000248437 TMEM94Q12767 1356 aa23.85■■□□□ 1.41
TUBA4A-201ENST00000248437 SBNO1A3KN83 1393 aa23.84■■□□□ 1.41
TUBA4A-201ENST00000248437 RLBP1P12271 317 aa23.84■■□□□ 1.41
TUBA4A-201ENST00000248437 IFT57Q9NWB7 429 aa23.84■■□□□ 1.41
TUBA4A-201ENST00000248437 ALDH1L2Q3SY69 923 aa23.83■■□□□ 1.41
TUBA4A-201ENST00000248437 SSH1Q8WYL5 1049 aa23.83■■□□□ 1.41
TUBA4A-201ENST00000248437 PDE4AP27815 886 aa23.82■■□□□ 1.4
TUBA4A-201ENST00000248437 GNAI1P63096 354 aa23.82■■□□□ 1.4
TUBA4A-201ENST00000248437 FLT4P35916 1363 aa23.82■■□□□ 1.4
TUBA4A-201ENST00000248437 BACH2Q9BYV9 841 aa23.82■■□□□ 1.4
TUBA4A-201ENST00000248437 ZNF335Q9H4Z2 1342 aaPredicted RBP23.82■■□□□ 1.4
TUBA4A-201ENST00000248437 MAP3K19Q56UN5 1328 aa23.81■■□□□ 1.4
TUBA4A-201ENST00000248437 ZNF853P0CG23 659 aa23.81■■□□□ 1.4
TUBA4A-201ENST00000248437 KIF16BQ96L93 1317 aa23.8■■□□□ 1.4
TUBA4A-201ENST00000248437 ARHGEF10O15013 1369 aa23.8■■□□□ 1.4
TUBA4A-201ENST00000248437 MVPQ14764 893 aaKnown RBP23.8■■□□□ 1.4
TUBA4A-201ENST00000248437 HSP90AB2PQ58FF8 381 aa23.8■■□□□ 1.4
TUBA4A-201ENST00000248437 DZIP1LQ8IYY4 767 aaKnown RBP23.8■■□□□ 1.4
TUBA4A-201ENST00000248437 TNNQ9UQP3 1299 aa23.8■■□□□ 1.4
TUBA4A-201ENST00000248437 KIF24Q5T7B8 1368 aa23.8■■□□□ 1.4
TUBA4A-201ENST00000248437 MSH5O43196 834 aa23.79■■□□□ 1.4
TUBA4A-201ENST00000248437 SULT6B1Q6IMI4 303 aa23.79■■□□□ 1.4
TUBA4A-201ENST00000248437 BRPF1P55201 1214 aaPredicted RBP23.79■■□□□ 1.4
TUBA4A-201ENST00000248437 FTSJ3Q8IY81 847 aaKnown RBP23.78■■□□□ 1.4
TUBA4A-201ENST00000248437 ESCO1Q5FWF5 840 aa23.78■■□□□ 1.4
TUBA4A-201ENST00000248437 C19orf44Q9H6X5 657 aa23.78■■□□□ 1.4
TUBA4A-201ENST00000248437 IGHDP01880 384 aa23.77■■□□□ 1.4
TUBA4A-201ENST00000248437 ATF7IPQ6VMQ6 1270 aa23.77■■□□□ 1.4
TUBA4A-201ENST00000248437 AEBP1Q8IUX7 1158 aa23.77■■□□□ 1.4
TUBA4A-201ENST00000248437 CFAP44Q96MT7 982 aa23.77■■□□□ 1.4
TUBA4A-201ENST00000248437 PHF8Q9UPP1 1060 aa23.77■■□□□ 1.4
TUBA4A-201ENST00000248437 TRIM27P14373 513 aa23.76■■□□□ 1.39
TUBA4A-201ENST00000248437 ORAI2Q96SN7 254 aa23.76■■□□□ 1.39
TUBA4A-201ENST00000248437 IPO8O15397 1037 aaKnown RBP23.76■■□□□ 1.39
TUBA4A-201ENST00000248437 SKAP1Q86WV1 359 aa23.76■■□□□ 1.39
TUBA4A-201ENST00000248437 THUMPD2Q9BTF0 503 aaKnown RBP23.76■■□□□ 1.39
TUBA4A-201ENST00000248437 ANP32AP39687 249 aaKnown RBP23.75■■□□□ 1.39
TUBA4A-201ENST00000248437 NLRP6P59044 892 aa23.75■■□□□ 1.39
TUBA4A-201ENST00000248437 LAS1LQ9Y4W2 734 aaKnown RBP23.75■■□□□ 1.39
TUBA4A-201ENST00000248437 KDRP35968 1356 aa23.74■■□□□ 1.39
TUBA4A-201ENST00000248437 SOX12O15370 315 aa23.74■■□□□ 1.39
TUBA4A-201ENST00000248437 MBIPQ9NS73 344 aa23.74■■□□□ 1.39
TUBA4A-201ENST00000248437 NOB1Q9ULX3 412 aaKnown RBP23.74■■□□□ 1.39
TUBA4A-201ENST00000248437 XIRP1Q702N8 1843 aaKnown RBP23.73■■□□□ 1.39
TUBA4A-201ENST00000248437 VAMP4O75379 141 aa23.72■■□□□ 1.39
TUBA4A-201ENST00000248437 AMPHP49418 695 aa23.72■■□□□ 1.39
TUBA4A-201ENST00000248437 DDX19BQ9UMR2 479 aa23.72■■□□□ 1.39
TUBA4A-201ENST00000248437 PCDHB15Q9Y5E8 787 aa23.71■■□□□ 1.39
TUBA4A-201ENST00000248437 C1orf167Q5SNV9 1468 aa23.71■■□□□ 1.39
TUBA4A-201ENST00000248437 IGSF1Q8N6C5 1336 aa23.7■■□□□ 1.38
TUBA4A-201ENST00000248437 ABTB2Q8N961 1025 aa23.7■■□□□ 1.38
TUBA4A-201ENST00000248437 LTN1O94822 1766 aa23.7■■□□□ 1.38
TUBA4A-201ENST00000248437 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.38
TUBA4A-201ENST00000248437 FAM83GA6ND36 823 aa23.69■■□□□ 1.38
TUBA4A-201ENST00000248437 VIRMAQ69YN4 1812 aaKnown RBP23.69■■□□□ 1.38
TUBA4A-201ENST00000248437 ATF3P18847 181 aa23.69■■□□□ 1.38
TUBA4A-201ENST00000248437 MST1RQ04912 1400 aa23.69■■□□□ 1.38
TUBA4A-201ENST00000248437 ANP32EQ9BTT0 268 aa23.68■■□□□ 1.38
TUBA4A-201ENST00000248437 RWDD1Q9H446 243 aaPredicted RBP23.68■■□□□ 1.38
TUBA4A-201ENST00000248437 RTL1A6NKG5 1358 aa23.68■■□□□ 1.38
TUBA4A-201ENST00000248437 FOXO3O43524 673 aa23.68■■□□□ 1.38
TUBA4A-201ENST00000248437 ARHGAP45Q92619 1136 aa23.68■■□□□ 1.38
TUBA4A-201ENST00000248437 PAK3O75914 559 aaPredicted RBP23.67■■□□□ 1.38
TUBA4A-201ENST00000248437 XPCQ01831 940 aaPredicted RBP23.67■■□□□ 1.38
TUBA4A-201ENST00000248437 NUTM2GQ5VZR2 741 aa23.67■■□□□ 1.38
TUBA4A-201ENST00000248437 DCCP43146 1447 aa23.67■■□□□ 1.38
TUBA4A-201ENST00000248437 MSH6P52701 1360 aa23.66■■□□□ 1.38
TUBA4A-201ENST00000248437 TWISTNBQ3B726 338 aaPredicted RBP23.66■■□□□ 1.38
TUBA4A-201ENST00000248437 FAM161AQ3B820 660 aa23.66■■□□□ 1.38
TUBA4A-201ENST00000248437 MRPL50Q8N5N7 158 aaKnown RBP23.66■■□□□ 1.38
TUBA4A-201ENST00000248437 TSPYL6Q8N831 410 aa23.66■■□□□ 1.38
TUBA4A-201ENST00000248437 HOXC9P31274 260 aa23.65■■□□□ 1.38
TUBA4A-201ENST00000248437 DCTN1Q14203 1278 aa23.65■■□□□ 1.38
TUBA4A-201ENST00000248437 ITPRIPQ8IWB1 547 aa23.65■■□□□ 1.38
TUBA4A-201ENST00000248437 IPO9Q96P70 1041 aaKnown RBP23.65■■□□□ 1.38
TUBA4A-201ENST00000248437 RGS3P49796 1198 aa23.65■■□□□ 1.38
TUBA4A-201ENST00000248437 EYA1Q99502 592 aa23.65■■□□□ 1.38
TUBA4A-201ENST00000248437 PHRF1Q9P1Y6 1649 aaKnown RBP23.65■■□□□ 1.38
TUBA4A-201ENST00000248437 TMEM57Q8N5G2 664 aa23.64■■□□□ 1.38
TUBA4A-201ENST00000248437 NFAT5O94916 1531 aa23.64■■□□□ 1.37
TUBA4A-201ENST00000248437 HAP1P54257 671 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms