RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 RGPD3A6NKT7 1758 aaPredicted RBP19.97■□□□□ 0.79
DDX39A-201ENST00000242776 RGPD4Q7Z3J3 1758 aa19.97■□□□□ 0.79
DDX39A-201ENST00000242776 ATF5Q9Y2D1 282 aaPredicted RBP19.97■□□□□ 0.79
DDX39A-201ENST00000242776 MYOM1P52179 1685 aa19.96■□□□□ 0.79
DDX39A-201ENST00000242776 COL18A1P39060 1754 aa19.96■□□□□ 0.79
DDX39A-201ENST00000242776 PLSCR1O15162 318 aa19.95■□□□□ 0.78
DDX39A-201ENST00000242776 MARCH10Q8NA82 808 aaPredicted RBP19.95■□□□□ 0.78
DDX39A-201ENST00000242776 AXIN2Q9Y2T1 843 aa19.95■□□□□ 0.78
DDX39A-201ENST00000242776 PIK3C2AO00443 1686 aa19.95■□□□□ 0.78
DDX39A-201ENST00000242776 USP6P35125 1406 aa19.95■□□□□ 0.78
DDX39A-201ENST00000242776 AATKQ6ZMQ8 1374 aa19.94■□□□□ 0.78
DDX39A-201ENST00000242776 C11orf95C9JLR9 678 aaPredicted RBP19.94■□□□□ 0.78
DDX39A-201ENST00000242776 CSB-PGBD3P0DP91 1061 aa19.94■□□□□ 0.78
DDX39A-201ENST00000242776 SLIT3O75094 1523 aa19.94■□□□□ 0.78
DDX39A-201ENST00000242776 PROM2Q8N271 834 aa19.93■□□□□ 0.78
DDX39A-201ENST00000242776 WDR17Q8IZU2 1322 aa19.91■□□□□ 0.78
DDX39A-201ENST00000242776 TRIM26Q12899 539 aaPredicted RBP19.9■□□□□ 0.78
DDX39A-201ENST00000242776 STK32BQ9NY57 414 aa19.9■□□□□ 0.78
DDX39A-201ENST00000242776 KAT6BQ8WYB5 2073 aa19.89■□□□□ 0.77
DDX39A-201ENST00000242776 TXNRD1Q16881 649 aa19.89■□□□□ 0.77
DDX39A-201ENST00000242776 CPSF1Q10570 1443 aaKnown RBP19.88■□□□□ 0.77
DDX39A-201ENST00000242776 PTGER2P43116 358 aa19.87■□□□□ 0.77
DDX39A-201ENST00000242776 BRD4O60885 1362 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-201ENST00000242776 ACSBG1Q96GR2 724 aa19.86■□□□□ 0.77
DDX39A-201ENST00000242776 FHDC1Q9C0D6 1143 aaPredicted RBP19.86■□□□□ 0.77
DDX39A-201ENST00000242776 EXOC5O00471 708 aa19.86■□□□□ 0.77
DDX39A-201ENST00000242776 SLC15A2Q16348 729 aa19.85■□□□□ 0.77
DDX39A-201ENST00000242776 ARHGEF25Q86VW2 580 aa19.85■□□□□ 0.77
DDX39A-201ENST00000242776 ZNF784Q8NCA9 323 aaPredicted RBP19.85■□□□□ 0.77
DDX39A-201ENST00000242776 TTC21BQ7Z4L5 1316 aa19.84■□□□□ 0.77
DDX39A-201ENST00000242776 EVC2Q86UK5 1308 aa19.84■□□□□ 0.77
DDX39A-201ENST00000242776 CDCA7Q9BWT1 371 aaPredicted RBP19.84■□□□□ 0.77
DDX39A-201ENST00000242776 CARD10Q9BWT7 1032 aa19.84■□□□□ 0.77
DDX39A-201ENST00000242776 SYT17Q9BSW7 474 aa19.83■□□□□ 0.76
DDX39A-201ENST00000242776 KCNH5Q8NCM2 988 aa19.82■□□□□ 0.76
DDX39A-201ENST00000242776 TRPM1Q7Z4N2 1603 aa19.82■□□□□ 0.76
DDX39A-201ENST00000242776 CHD4Q14839 1912 aa19.82■□□□□ 0.76
DDX39A-201ENST00000242776 UTRNP46939 3433 aa19.81■□□□□ 0.76
DDX39A-201ENST00000242776 MTFR1LQ9H019 292 aa19.79■□□□□ 0.76
DDX39A-201ENST00000242776 NHSQ6T4R5 1651 aa19.79■□□□□ 0.76
DDX39A-201ENST00000242776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
DDX39A-201ENST00000242776 KLHL34Q8N239 644 aa19.79■□□□□ 0.76
DDX39A-201ENST00000242776 BCL9O00512 1426 aa19.78■□□□□ 0.76
DDX39A-201ENST00000242776 TNS2Q63HR2 1409 aa19.78■□□□□ 0.76
DDX39A-201ENST00000242776 NFAT5O94916 1531 aa19.78■□□□□ 0.76
DDX39A-201ENST00000242776 BTAF1O14981 1849 aa19.78■□□□□ 0.76
DDX39A-201ENST00000242776 NLRP2Q9NX02 1062 aa19.78■□□□□ 0.76
DDX39A-201ENST00000242776 KTN1Q86UP2 1357 aaKnown RBP19.77■□□□□ 0.76
DDX39A-201ENST00000242776 SENP3-EIF4A1A0A087X0R7 540 aa19.77■□□□□ 0.76
DDX39A-201ENST00000242776 L3MBTL2Q969R5 705 aa19.77■□□□□ 0.76
DDX39A-201ENST00000242776 ZNF692Q9BU19 519 aaPredicted RBP19.77■□□□□ 0.76
DDX39A-201ENST00000242776 CCDC7Q96M83 1385 aa19.77■□□□□ 0.75
DDX39A-201ENST00000242776 ARXQ96QS3 562 aa19.76■□□□□ 0.75
DDX39A-201ENST00000242776 LTN1O94822 1766 aa19.76■□□□□ 0.75
DDX39A-201ENST00000242776 TTC21AQ8NDW8 1320 aa19.76■□□□□ 0.75
DDX39A-201ENST00000242776 SGIP1Q9BQI5 828 aa19.74■□□□□ 0.75
DDX39A-201ENST00000242776 ZNF827Q17R98 1081 aa19.73■□□□□ 0.75
DDX39A-201ENST00000242776 PELP1Q8IZL8 1130 aaKnown RBP19.73■□□□□ 0.75
DDX39A-201ENST00000242776 MON2Q7Z3U7 1717 aa19.73■□□□□ 0.75
DDX39A-201ENST00000242776 ROCK2O75116 1388 aaKnown RBP19.73■□□□□ 0.75
DDX39A-201ENST00000242776 NME9Q86XW9 330 aa19.73■□□□□ 0.75
DDX39A-201ENST00000242776 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
DDX39A-201ENST00000242776 GPR162Q16538 588 aa19.72■□□□□ 0.75
DDX39A-201ENST00000242776 SIN3AQ96ST3 1273 aa19.72■□□□□ 0.75
DDX39A-201ENST00000242776 PAPPAQ13219 1627 aa19.72■□□□□ 0.75
DDX39A-201ENST00000242776 ABCC6O95255 1503 aa19.72■□□□□ 0.75
DDX39A-201ENST00000242776 IL2RBP14784 551 aa19.71■□□□□ 0.75
DDX39A-201ENST00000242776 ANKRD24Q8TF21 1146 aa19.7■□□□□ 0.74
DDX39A-201ENST00000242776 LRRC4BQ9NT99 713 aa19.7■□□□□ 0.74
DDX39A-201ENST00000242776 ERBB3P21860 1342 aa19.7■□□□□ 0.74
DDX39A-201ENST00000242776 TMC1Q8TDI8 760 aa19.69■□□□□ 0.74
DDX39A-201ENST00000242776 KCNQ4P56696 695 aa19.68■□□□□ 0.74
DDX39A-201ENST00000242776 C1QTNF8P60827 252 aa19.68■□□□□ 0.74
DDX39A-201ENST00000242776 DDX54Q8TDD1 881 aaKnown RBP19.68■□□□□ 0.74
DDX39A-201ENST00000242776 LTV1Q96GA3 475 aaPredicted RBP19.68■□□□□ 0.74
DDX39A-201ENST00000242776 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
DDX39A-201ENST00000242776 TUBGCP6Q96RT7 1819 aa19.66■□□□□ 0.74
DDX39A-201ENST00000242776 SYTL4Q96C24 671 aaPredicted RBP19.66■□□□□ 0.74
DDX39A-201ENST00000242776 AKT1S1Q96B36 256 aa19.63■□□□□ 0.73
DDX39A-201ENST00000242776 POLD1P28340 1107 aa19.62■□□□□ 0.73
DDX39A-201ENST00000242776 USP31Q70CQ4 1352 aa19.62■□□□□ 0.73
DDX39A-201ENST00000242776 CD163L1Q9NR16 1453 aa19.62■□□□□ 0.73
DDX39A-201ENST00000242776 USP54Q70EL1 1684 aa19.62■□□□□ 0.73
DDX39A-201ENST00000242776 SBNO2Q9Y2G9 1366 aa19.61■□□□□ 0.73
DDX39A-201ENST00000242776 PNPLA7Q6ZV29 1317 aa19.61■□□□□ 0.73
DDX39A-201ENST00000242776 NLGN2Q8NFZ4 835 aa19.61■□□□□ 0.73
DDX39A-201ENST00000242776 SLC12A5Q9H2X9 1139 aa19.61■□□□□ 0.73
DDX39A-201ENST00000242776 TFCP2L1Q9NZI6 479 aa19.61■□□□□ 0.73
DDX39A-201ENST00000242776 RGPD2P0DJD1 1756 aa19.61■□□□□ 0.73
DDX39A-201ENST00000242776 DOT1LQ8TEK3 1739 aa19.61■□□□□ 0.73
DDX39A-201ENST00000242776 HDGFL2Q7Z4V5 671 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-201ENST00000242776 QSER1Q2KHR3 1735 aa19.6■□□□□ 0.73
DDX39A-201ENST00000242776 MAP3K5Q99683 1374 aa19.6■□□□□ 0.73
DDX39A-201ENST00000242776 MSH5O43196 834 aa19.6■□□□□ 0.73
DDX39A-201ENST00000242776 GIGYF1O75420 1035 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-201ENST00000242776 PRIM1P49642 420 aaKnown RBP19.59■□□□□ 0.73
DDX39A-201ENST00000242776 GOLGB1Q14789 3259 aaKnown RBP19.59■□□□□ 0.73
DDX39A-201ENST00000242776 SLC27A3Q5K4L6 730 aa19.57■□□□□ 0.72
DDX39A-201ENST00000242776 FBLN1P23142 703 aa19.56■□□□□ 0.72
DDX39A-201ENST00000242776 SLC16A10Q8TF71 515 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms