RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 FAM135BQ49AJ0 1406 aa21.19■□□□□ 0.98
SSPN-201ENST00000242729 SULT6B1Q6IMI4 303 aa21.18■□□□□ 0.98
SSPN-201ENST00000242729 SIRT2Q8IXJ6 389 aa21.18■□□□□ 0.98
SSPN-201ENST00000242729 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.18■□□□□ 0.98
SSPN-201ENST00000242729 ALDH1L2Q3SY69 923 aa21.17■□□□□ 0.98
SSPN-201ENST00000242729 MAP2P11137 1827 aaKnown RBP21.16■□□□□ 0.98
SSPN-201ENST00000242729 CCDC61Q9Y6R9 512 aa21.16■□□□□ 0.98
SSPN-201ENST00000242729 PRR36Q9H6K5 1346 aa21.16■□□□□ 0.98
SSPN-201ENST00000242729 CLTCQ00610 1675 aaKnown RBP21.16■□□□□ 0.98
SSPN-201ENST00000242729 GNAI1P63096 354 aa21.16■□□□□ 0.98
SSPN-201ENST00000242729 NCBP3Q53F19 620 aaKnown RBP21.16■□□□□ 0.98
SSPN-201ENST00000242729 SLC26A8Q96RN1 970 aa21.16■□□□□ 0.98
SSPN-201ENST00000242729 ANO8Q9HCE9 1232 aaPredicted RBP21.15■□□□□ 0.98
SSPN-201ENST00000242729 RBM42Q9BTD8 480 aaKnown RBP21.14■□□□□ 0.98
SSPN-201ENST00000242729 CEBPAP49715 358 aaPredicted RBP21.14■□□□□ 0.97
SSPN-201ENST00000242729 HSP90AB2PQ58FF8 381 aa21.14■□□□□ 0.97
SSPN-201ENST00000242729 CPS1P31327 1500 aa21.14■□□□□ 0.97
SSPN-201ENST00000242729 C16orf71Q8IYS4 520 aaPredicted RBP21.13■□□□□ 0.97
SSPN-201ENST00000242729 MED14O60244 1454 aa21.13■□□□□ 0.97
SSPN-201ENST00000242729 IFT57Q9NWB7 429 aa21.12■□□□□ 0.97
SSPN-201ENST00000242729 FOXO3O43524 673 aa21.11■□□□□ 0.97
SSPN-201ENST00000242729 HSCBQ8IWL3 235 aa21.11■□□□□ 0.97
SSPN-201ENST00000242729 KIF20BQ96Q89 1820 aa21.11■□□□□ 0.97
SSPN-201ENST00000242729 EIF4A2Q14240 407 aaKnown RBP21.11■□□□□ 0.97
SSPN-201ENST00000242729 CFAP44Q96MT7 982 aa21.1■□□□□ 0.97
SSPN-201ENST00000242729 CD2BP2O95400 341 aaKnown RBP21.1■□□□□ 0.97
SSPN-201ENST00000242729 ANKRD26Q9UPS8 1709 aa21.09■□□□□ 0.97
SSPN-201ENST00000242729 ZMYM3Q14202 1370 aa21.09■□□□□ 0.97
SSPN-201ENST00000242729 NUTM2GQ5VZR2 741 aa21.09■□□□□ 0.97
SSPN-201ENST00000242729 EDC4Q6P2E9 1401 aaKnown RBP21.09■□□□□ 0.97
SSPN-201ENST00000242729 PLEKHG5O94827 1062 aa21.08■□□□□ 0.97
SSPN-201ENST00000242729 OTUD7AQ8TE49 926 aaPredicted RBP21.08■□□□□ 0.97
SSPN-201ENST00000242729 ZNF853P0CG23 659 aa21.08■□□□□ 0.97
SSPN-201ENST00000242729 CPSF1Q10570 1443 aaKnown RBP21.08■□□□□ 0.96
SSPN-201ENST00000242729 ACEP12821 1306 aa21.08■□□□□ 0.96
SSPN-201ENST00000242729 SMARCA5O60264 1052 aaPredicted RBP21.08■□□□□ 0.96
SSPN-201ENST00000242729 TBC1D9Q6ZT07 1266 aa21.08■□□□□ 0.96
SSPN-201ENST00000242729 NECTIN2Q92692 538 aa21.07■□□□□ 0.96
SSPN-201ENST00000242729 ATP7BP35670 1465 aa21.07■□□□□ 0.96
SSPN-201ENST00000242729 ROBO2Q9HCK4 1378 aa21.07■□□□□ 0.96
SSPN-201ENST00000242729 CALD1Q05682 793 aaKnown RBP21.07■□□□□ 0.96
SSPN-201ENST00000242729 HSP90AA1P07900 732 aaKnown RBP21.06■□□□□ 0.96
SSPN-201ENST00000242729 MCM4P33991 863 aa21.06■□□□□ 0.96
SSPN-201ENST00000242729 HSP90AB1P08238 724 aaKnown RBP21.05■□□□□ 0.96
SSPN-201ENST00000242729 SLC4A10Q6U841 1118 aa21.05■□□□□ 0.96
SSPN-201ENST00000242729 LTKP29376 864 aa21.05■□□□□ 0.96
SSPN-201ENST00000242729 F6X3S4 739 aa21.03■□□□□ 0.96
SSPN-201ENST00000242729 CHMP5Q9NZZ3 219 aa21.03■□□□□ 0.96
SSPN-201ENST00000242729 ABCC4O15439 1325 aa21.03■□□□□ 0.96
SSPN-201ENST00000242729 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
SSPN-201ENST00000242729 BMP2KLQ5H9B9 411 aa21.02■□□□□ 0.96
SSPN-201ENST00000242729 TTC21BQ7Z4L5 1316 aa21.02■□□□□ 0.96
SSPN-201ENST00000242729 GSPT1P15170 499 aaKnown RBP21.02■□□□□ 0.95
SSPN-201ENST00000242729 GCC1Q96CN9 775 aa21.02■□□□□ 0.95
SSPN-201ENST00000242729 PANK2Q9BZ23 570 aa21.02■□□□□ 0.95
SSPN-201ENST00000242729 RIMBP3CA6NJZ7 1639 aa21.01■□□□□ 0.95
SSPN-201ENST00000242729 RIMBP3BA6NNM3 1639 aa21.01■□□□□ 0.95
SSPN-201ENST00000242729 RIMBP3Q9UFD9 1639 aa21.01■□□□□ 0.95
SSPN-201ENST00000242729 LMOD3Q0VAK6 560 aa21.01■□□□□ 0.95
SSPN-201ENST00000242729 KIF2CQ99661 725 aa21.01■□□□□ 0.95
SSPN-201ENST00000242729 MEIS3Q99687 375 aa21.01■□□□□ 0.95
SSPN-201ENST00000242729 API5Q9BZZ5 524 aaKnown RBP21■□□□□ 0.95
SSPN-201ENST00000242729 SLC4A2P04920 1241 aa21■□□□□ 0.95
SSPN-201ENST00000242729 ARHGAP45Q92619 1136 aa21■□□□□ 0.95
SSPN-201ENST00000242729 LTV1Q96GA3 475 aaPredicted RBP21■□□□□ 0.95
SSPN-201ENST00000242729 DIP2BQ9P265 1576 aa21■□□□□ 0.95
SSPN-201ENST00000242729 TRAK2O60296 914 aa20.99■□□□□ 0.95
SSPN-201ENST00000242729 G2E3Q7L622 706 aa20.99■□□□□ 0.95
SSPN-201ENST00000242729 ZNF428Q96B54 188 aa20.99■□□□□ 0.95
SSPN-201ENST00000242729 CDK12Q9NYV4 1490 aaPredicted RBP20.99■□□□□ 0.95
SSPN-201ENST00000242729 TSHZ3Q63HK5 1081 aa20.98■□□□□ 0.95
SSPN-201ENST00000242729 RBM33Q96EV2 1170 aaKnown RBP20.98■□□□□ 0.95
SSPN-201ENST00000242729 RBM25P49756 843 aaKnown RBP20.98■□□□□ 0.95
SSPN-201ENST00000242729 PTCH1Q13635 1447 aa20.98■□□□□ 0.95
SSPN-201ENST00000242729 BRPF1P55201 1214 aaPredicted RBP20.97■□□□□ 0.95
SSPN-201ENST00000242729 NRXN3Q9Y4C0 1643 aa20.97■□□□□ 0.95
SSPN-201ENST00000242729 PLEKHM2Q8IWE5 1019 aa20.97■□□□□ 0.95
SSPN-201ENST00000242729 ZNF692Q9BU19 519 aaPredicted RBP20.97■□□□□ 0.95
SSPN-201ENST00000242729 CDC42BPGQ6DT37 1551 aa20.96■□□□□ 0.95
SSPN-201ENST00000242729 SPATA31D1Q6ZQQ2 1576 aa20.96■□□□□ 0.95
SSPN-201ENST00000242729 DLG5Q8TDM6 1919 aa20.96■□□□□ 0.95
SSPN-201ENST00000242729 DLC1Q96QB1 1528 aa20.96■□□□□ 0.95
SSPN-201ENST00000242729 TNPO1Q92973 898 aaKnown RBP20.96■□□□□ 0.95
SSPN-201ENST00000242729 MSH6P52701 1360 aa20.95■□□□□ 0.94
SSPN-201ENST00000242729 AATKQ6ZMQ8 1374 aa20.95■□□□□ 0.94
SSPN-201ENST00000242729 TNRQ92752 1358 aa20.95■□□□□ 0.94
SSPN-201ENST00000242729 MAP3K19Q56UN5 1328 aa20.95■□□□□ 0.94
SSPN-201ENST00000242729 MTHFSDQ2M296 383 aaKnown RBP20.95■□□□□ 0.94
SSPN-201ENST00000242729 NGDNQ8NEJ9 315 aaKnown RBP20.95■□□□□ 0.94
SSPN-201ENST00000242729 C14orf37Q86TY3 774 aa20.95■□□□□ 0.94
SSPN-201ENST00000242729 SETD1AO15047 1707 aaKnown RBP20.95■□□□□ 0.94
SSPN-201ENST00000242729 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
SSPN-201ENST00000242729 XRCC6P12956 609 aaKnown RBP eCLIP20.94■□□□□ 0.94
SSPN-201ENST00000242729 HDGFP51858 240 aaKnown RBP20.94■□□□□ 0.94
SSPN-201ENST00000242729 TSPYL4Q9UJ04 414 aa20.94■□□□□ 0.94
SSPN-201ENST00000242729 ZBTB7CA1YPR0 619 aa20.93■□□□□ 0.94
SSPN-201ENST00000242729 CHL1O00533 1208 aa20.93■□□□□ 0.94
SSPN-201ENST00000242729 GAS2L2Q8NHY3 880 aa20.93■□□□□ 0.94
SSPN-201ENST00000242729 GOLGA6L3A6NEY3 463 aa20.92■□□□□ 0.94
SSPN-201ENST00000242729 AMPHP49418 695 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms