RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 RBM10P98175 930 aaKnown RBP8.87□□□□□ -0.99
PRDM2-201ENST00000235372 TTLL12Q14166 644 aaPredicted RBP8.87□□□□□ -0.99
PRDM2-201ENST00000235372 RGS22Q8NE09 1264 aa8.87□□□□□ -0.99
PRDM2-201ENST00000235372 NASPP49321 788 aaPredicted RBP8.86□□□□□ -0.99
PRDM2-201ENST00000235372 CCDC113Q9H0I3 377 aa8.86□□□□□ -0.99
PRDM2-201ENST00000235372 SMG6Q86US8 1419 aaKnown RBP8.86□□□□□ -0.99
PRDM2-201ENST00000235372 RAB3IL1Q8TBN0 382 aa8.86□□□□□ -0.99
PRDM2-201ENST00000235372 RBM42Q9BTD8 480 aaKnown RBP8.86□□□□□ -0.99
PRDM2-201ENST00000235372 GSTTP1A0A1W2PQM5 241 aa8.86□□□□□ -0.99
PRDM2-201ENST00000235372 PIBF1Q8WXW3 757 aa8.86□□□□□ -0.99
PRDM2-201ENST00000235372 ZSCAN25Q6NSZ9 544 aa8.86□□□□□ -0.99
PRDM2-201ENST00000235372 NFKBIBQ15653 356 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 ZNF710Q8N1W2 664 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 CCDC148Q8NFR7 591 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 TSPY26PQ9H489 355 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 RIPK4P57078 832 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 UBE4AQ14139 1066 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 LARP1Q6PKG0 1096 aaKnown RBP8.85□□□□□ -0.99
PRDM2-201ENST00000235372 LRSAM1Q6UWE0 723 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 CTNNA2P26232 953 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 AEBP1Q8IUX7 1158 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 CEP57L1Q8IYX8 460 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 SREK1Q8WXA9 508 aaKnown RBP8.85□□□□□ -0.99
PRDM2-201ENST00000235372 TIGD1Q96MW7 591 aa8.85□□□□□ -0.99
PRDM2-201ENST00000235372 CDKL5O76039 1030 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 CEBPZQ03701 1054 aaKnown RBP8.84□□□□□ -0.99
PRDM2-201ENST00000235372 TTC16Q8NEE8 873 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 NUP133Q8WUM0 1156 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 MPHOSPH9Q99550 1183 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 GOPCQ9HD26 462 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 MYBBP1AQ9BQG0 1328 aaKnown RBP8.84□□□□□ -0.99
PRDM2-201ENST00000235372 USP5P45974 858 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 MPNDQ8N594 471 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 CTNNBL1Q8WYA6 563 aaPredicted RBP8.84□□□□□ -0.99
PRDM2-201ENST00000235372 EIF5P55010 431 aaKnown RBP8.84□□□□□ -0.99
PRDM2-201ENST00000235372 ANKRD1Q15327 319 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 VPS36Q86VN1 386 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 MPHOSPH8Q99549 860 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 ZNF287Q9HBT7 754 aa8.84□□□□□ -0.99
PRDM2-201ENST00000235372 SEC63Q9UGP8 760 aaKnown RBP8.83□□□□□ -1
PRDM2-201ENST00000235372 MINK1Q8N4C8 1332 aaPredicted RBP8.83□□□□□ -1
PRDM2-201ENST00000235372 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.83□□□□□ -1
PRDM2-201ENST00000235372 V9GYY5 206 aaPredicted RBP8.83□□□□□ -1
PRDM2-201ENST00000235372 CAVIN1Q6NZI2 390 aaKnown RBP8.83□□□□□ -1
PRDM2-201ENST00000235372 COG6Q9Y2V7 657 aa8.83□□□□□ -1
PRDM2-201ENST00000235372 GNAI1P63096 354 aa8.83□□□□□ -1
PRDM2-201ENST00000235372 FAM177A1Q8N128 213 aaPredicted RBP8.83□□□□□ -1
PRDM2-201ENST00000235372 CCDC102AQ96A19 550 aa8.83□□□□□ -1
PRDM2-201ENST00000235372 TSG101Q99816 390 aa8.83□□□□□ -1
PRDM2-201ENST00000235372 EHMT1Q9H9B1 1298 aa8.83□□□□□ -1
PRDM2-201ENST00000235372 SHTN1A0MZ66 631 aa8.83□□□□□ -1
PRDM2-201ENST00000235372 NOP2P46087 812 aaKnown RBP8.83□□□□□ -1
PRDM2-201ENST00000235372 MCM2P49736 904 aa8.83□□□□□ -1
PRDM2-201ENST00000235372 IMMTQ16891 758 aaKnown RBP8.83□□□□□ -1
PRDM2-201ENST00000235372 TAOK3Q9H2K8 898 aa8.83□□□□□ -1
PRDM2-201ENST00000235372 IFFO1Q0D2I5 559 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 WDR78Q5VTH9 848 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 SPC24Q8NBT2 197 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 CCDC18Q5T9S5 1454 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 MBD3O95983 291 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 ME1P48163 572 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 LMAN1P49257 510 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 CCDC30Q5VVM6 783 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 CEP131Q9UPN4 1083 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 MIA2Q96PC5 1412 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 CDC45O75419 566 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 GTPBP4Q9BZE4 634 aaKnown RBP8.82□□□□□ -1
PRDM2-201ENST00000235372 ZMYND15Q9H091 742 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 PDE4AP27815 886 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 C6orf163Q5TEZ5 329 aa8.82□□□□□ -1
PRDM2-201ENST00000235372 MPHOSPH6Q99547 160 aaKnown RBP8.82□□□□□ -1
PRDM2-201ENST00000235372 SPA17Q15506 151 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 UBAC1Q9BSL1 405 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 CCDC192P0DO97 292 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 ARL1P40616 181 aaPredicted RBP8.81□□□□□ -1
PRDM2-201ENST00000235372 TICAM2Q86XR7 235 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 CRBNQ96SW2 442 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 GPRASP1Q5JY77 1395 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 MCM3P25205 808 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 MAP9Q49MG5 647 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 CCDC178Q5BJE1 867 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 DAAM2Q86T65 1068 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 WASF1Q92558 559 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 CRACR2AQ9BSW2 395 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 TNMDQ9H2S6 317 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 STRN4Q9NRL3 753 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 TDO2P48775 406 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 CUL5Q93034 780 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 PANK3Q9H999 370 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 FGFR1OPO95684 399 aaKnown RBP8.81□□□□□ -1
PRDM2-201ENST00000235372 RNF214Q8ND24 703 aa8.81□□□□□ -1
PRDM2-201ENST00000235372 SMARCA2P51531 1590 aa8.8□□□□□ -1
PRDM2-201ENST00000235372 CCDC144AA2RUR9 1427 aa8.8□□□□□ -1
PRDM2-201ENST00000235372 ZNF354CQ86Y25 554 aa8.8□□□□□ -1
PRDM2-201ENST00000235372 TNNT1P13805 278 aa8.8□□□□□ -1
PRDM2-201ENST00000235372 TMCO3Q6UWJ1 677 aa8.8□□□□□ -1
PRDM2-201ENST00000235372 SERPINA10Q9UK55 444 aa8.8□□□□□ -1
PRDM2-201ENST00000235372 SH3BP5O60239 455 aa8.8□□□□□ -1
PRDM2-201ENST00000235372 HNRNPMP52272 730 aaKnown RBP eCLIP8.8□□□□□ -1
PRDM2-201ENST00000235372 C22orf23Q9BZE7 217 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms