RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 ARHGAP45Q92619 1136 aa17.36■□□□□ 0.37
SCNN1A-201ENST00000228916 CD163L1Q9NR16 1453 aa17.36■□□□□ 0.37
SCNN1A-201ENST00000228916 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
SCNN1A-201ENST00000228916 DDX49Q9Y6V7 483 aaKnown RBP17.36■□□□□ 0.37
SCNN1A-201ENST00000228916 ZNF445P59923 1031 aa17.35■□□□□ 0.37
SCNN1A-201ENST00000228916 KIAA1211Q6ZU35 1233 aa17.35■□□□□ 0.37
SCNN1A-201ENST00000228916 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
SCNN1A-201ENST00000228916 OFD1O75665 1012 aa17.35■□□□□ 0.37
SCNN1A-201ENST00000228916 SIRT2Q8IXJ6 389 aa17.35■□□□□ 0.37
SCNN1A-201ENST00000228916 CDC45O75419 566 aa17.34■□□□□ 0.37
SCNN1A-201ENST00000228916 IDI1Q13907 227 aa17.34■□□□□ 0.37
SCNN1A-201ENST00000228916 ANP32BQ92688 251 aaKnown RBP17.34■□□□□ 0.37
SCNN1A-201ENST00000228916 MRPL50Q8N5N7 158 aaKnown RBP17.34■□□□□ 0.37
SCNN1A-201ENST00000228916 PDCL3Q9H2J4 239 aa17.34■□□□□ 0.37
SCNN1A-201ENST00000228916 LRRC7Q96NW7 1537 aa17.33■□□□□ 0.37
SCNN1A-201ENST00000228916 PTPRMP28827 1452 aa17.33■□□□□ 0.36
SCNN1A-201ENST00000228916 TERF1P54274 439 aa17.33■□□□□ 0.36
SCNN1A-201ENST00000228916 C1orf115Q9H7X2 142 aa17.33■□□□□ 0.36
SCNN1A-201ENST00000228916 MINK1Q8N4C8 1332 aaPredicted RBP17.33■□□□□ 0.36
SCNN1A-201ENST00000228916 FCHSD2O94868 740 aa17.32■□□□□ 0.36
SCNN1A-201ENST00000228916 CYP2E1P05181 493 aaPredicted RBP17.32■□□□□ 0.36
SCNN1A-201ENST00000228916 VAMP4O75379 141 aa17.32■□□□□ 0.36
SCNN1A-201ENST00000228916 RABEP1Q15276 862 aa17.32■□□□□ 0.36
SCNN1A-201ENST00000228916 HS1BP3Q53T59 392 aa17.32■□□□□ 0.36
SCNN1A-201ENST00000228916 MYO5BQ9ULV0 1848 aa17.32■□□□□ 0.36
SCNN1A-201ENST00000228916 FAM135BQ49AJ0 1406 aa17.32■□□□□ 0.36
SCNN1A-201ENST00000228916 ABCC4O15439 1325 aa17.32■□□□□ 0.36
SCNN1A-201ENST00000228916 RAPGEF3O95398 923 aa17.31■□□□□ 0.36
SCNN1A-201ENST00000228916 NUCB2P80303 420 aa17.31■□□□□ 0.36
SCNN1A-201ENST00000228916 TERF2IPQ9NYB0 399 aa17.31■□□□□ 0.36
SCNN1A-201ENST00000228916 ZFYVE9O95405 1425 aa17.31■□□□□ 0.36
SCNN1A-201ENST00000228916 ATAD2Q6PL18 1390 aa17.3■□□□□ 0.36
SCNN1A-201ENST00000228916 GSPT1P15170 499 aaKnown RBP17.3■□□□□ 0.36
SCNN1A-201ENST00000228916 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.3■□□□□ 0.36
SCNN1A-201ENST00000228916 PRAM1Q96QH2 718 aa17.3■□□□□ 0.36
SCNN1A-201ENST00000228916 AK9Q5TCS8 1911 aa17.3■□□□□ 0.36
SCNN1A-201ENST00000228916 MSNP26038 577 aaKnown RBP17.3■□□□□ 0.36
SCNN1A-201ENST00000228916 CFAP44Q96MT7 982 aa17.29■□□□□ 0.36
SCNN1A-201ENST00000228916 LMBRD1Q9NUN5 540 aa17.29■□□□□ 0.36
SCNN1A-201ENST00000228916 FBLN1P23142 703 aa17.29■□□□□ 0.36
SCNN1A-201ENST00000228916 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
SCNN1A-201ENST00000228916 ZSCAN23Q3MJ62 389 aa17.28■□□□□ 0.36
SCNN1A-201ENST00000228916 PDLIM2Q96JY6 352 aa17.28■□□□□ 0.36
SCNN1A-201ENST00000228916 MCTP1Q6DN14 999 aa17.28■□□□□ 0.36
SCNN1A-201ENST00000228916 PLEKHM2Q8IWE5 1019 aa17.27■□□□□ 0.36
SCNN1A-201ENST00000228916 PRKAR2BP31323 418 aa17.27■□□□□ 0.36
SCNN1A-201ENST00000228916 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
SCNN1A-201ENST00000228916 TSPYL6Q8N831 410 aa17.27■□□□□ 0.35
SCNN1A-201ENST00000228916 YEATS2Q9ULM3 1422 aa17.26■□□□□ 0.35
SCNN1A-201ENST00000228916 CAVIN1Q6NZI2 390 aaKnown RBP17.26■□□□□ 0.35
SCNN1A-201ENST00000228916 NOL7Q9UMY1 257 aaKnown RBP17.26■□□□□ 0.35
SCNN1A-201ENST00000228916 NPM1P06748 294 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCNN1A-201ENST00000228916 USP26Q9BXU7 913 aa17.26■□□□□ 0.35
SCNN1A-201ENST00000228916 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
SCNN1A-201ENST00000228916 KIF20BQ96Q89 1820 aa17.26■□□□□ 0.35
SCNN1A-201ENST00000228916 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
SCNN1A-201ENST00000228916 ZNF500O60304 480 aaPredicted RBP17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 NFE2L2Q16236 605 aa17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 CABP1Q9NZU7 370 aa17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 TTC22Q5TAA0 569 aa17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 RBSNQ9H1K0 784 aa17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 CWC22Q9HCG8 908 aaKnown RBP17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 IFT57Q9NWB7 429 aa17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 KIF24Q5T7B8 1368 aa17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 ZNF853P0CG23 659 aa17.25■□□□□ 0.35
SCNN1A-201ENST00000228916 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
SCNN1A-201ENST00000228916 THUMPD2Q9BTF0 503 aaKnown RBP17.24■□□□□ 0.35
SCNN1A-201ENST00000228916 CDK19Q9BWU1 502 aa17.24■□□□□ 0.35
SCNN1A-201ENST00000228916 DCTPP1Q9H773 170 aa17.24■□□□□ 0.35
SCNN1A-201ENST00000228916 GNAI1P63096 354 aa17.24■□□□□ 0.35
SCNN1A-201ENST00000228916 SLC52A1Q9NWF4 448 aa17.24■□□□□ 0.35
SCNN1A-201ENST00000228916 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.24■□□□□ 0.35
SCNN1A-201ENST00000228916 PKP1Q13835 747 aa17.23■□□□□ 0.35
SCNN1A-201ENST00000228916 HDGFL2Q7Z4V5 671 aaPredicted RBP17.23■□□□□ 0.35
SCNN1A-201ENST00000228916 API5Q9BZZ5 524 aaKnown RBP17.23■□□□□ 0.35
SCNN1A-201ENST00000228916 POLKQ9UBT6 870 aa17.23■□□□□ 0.35
SCNN1A-201ENST00000228916 ARHGEF40Q8TER5 1519 aa17.22■□□□□ 0.35
SCNN1A-201ENST00000228916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCNN1A-201ENST00000228916 PRIM1P49642 420 aaKnown RBP17.22■□□□□ 0.35
SCNN1A-201ENST00000228916 MBIPQ9NS73 344 aa17.22■□□□□ 0.35
SCNN1A-201ENST00000228916 HMOX1P09601 288 aa17.21■□□□□ 0.35
SCNN1A-201ENST00000228916 NCLP19338 710 aaKnown RBP17.21■□□□□ 0.35
SCNN1A-201ENST00000228916 INTS3Q68E01 1043 aaKnown RBP17.21■□□□□ 0.35
SCNN1A-201ENST00000228916 GPT2Q8TD30 523 aa17.21■□□□□ 0.35
SCNN1A-201ENST00000228916 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.34
SCNN1A-201ENST00000228916 TWISTNBQ3B726 338 aaPredicted RBP17.2■□□□□ 0.34
SCNN1A-201ENST00000228916 ELL2O00472 640 aaPredicted RBP17.2■□□□□ 0.34
SCNN1A-201ENST00000228916 ZDHHC9Q9Y397 364 aa17.2■□□□□ 0.34
SCNN1A-201ENST00000228916 MAP2P11137 1827 aaKnown RBP17.19■□□□□ 0.34
SCNN1A-201ENST00000228916 ZKSCAN5Q9Y2L8 839 aa17.19■□□□□ 0.34
SCNN1A-201ENST00000228916 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
SCNN1A-201ENST00000228916 ST18O60284 1047 aa17.19■□□□□ 0.34
SCNN1A-201ENST00000228916 PRPF40AO75400 957 aaKnown RBP17.19■□□□□ 0.34
SCNN1A-201ENST00000228916 MCM5P33992 734 aa17.19■□□□□ 0.34
SCNN1A-201ENST00000228916 ZGPATQ8N5A5 531 aaKnown RBP17.19■□□□□ 0.34
SCNN1A-201ENST00000228916 MAP7D2Q96T17 732 aa17.19■□□□□ 0.34
SCNN1A-201ENST00000228916 R3HCC1Q9Y3T6 440 aaKnown RBP17.19■□□□□ 0.34
SCNN1A-201ENST00000228916 ATP10DQ9P241 1426 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms