RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 SHPRHQ149N8 1683 aa17.4■□□□□ 0.38
SHPK-201ENST00000225519 NOL8Q76FK4 1167 aaKnown RBP17.4■□□□□ 0.38
SHPK-201ENST00000225519 TMEM63CQ9P1W3 806 aa17.4■□□□□ 0.38
SHPK-201ENST00000225519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHPK-201ENST00000225519 PPIP5K1Q6PFW1 1433 aa17.4■□□□□ 0.38
SHPK-201ENST00000225519 MBD3O95983 291 aa17.39■□□□□ 0.37
SHPK-201ENST00000225519 PLCB2Q00722 1185 aa17.39■□□□□ 0.37
SHPK-201ENST00000225519 SYAP1Q96A49 352 aaPredicted RBP17.39■□□□□ 0.37
SHPK-201ENST00000225519 THUMPD2Q9BTF0 503 aaKnown RBP17.39■□□□□ 0.37
SHPK-201ENST00000225519 TSPY26PQ9H489 355 aa17.39■□□□□ 0.37
SHPK-201ENST00000225519 SBNO2Q9Y2G9 1366 aa17.39■□□□□ 0.37
SHPK-201ENST00000225519 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
SHPK-201ENST00000225519 GSPT1P15170 499 aaKnown RBP17.38■□□□□ 0.37
SHPK-201ENST00000225519 NOS1P29475 1434 aa17.38■□□□□ 0.37
SHPK-201ENST00000225519 USP26Q9BXU7 913 aa17.37■□□□□ 0.37
SHPK-201ENST00000225519 STK26Q9P289 416 aa17.37■□□□□ 0.37
SHPK-201ENST00000225519 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
SHPK-201ENST00000225519 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
SHPK-201ENST00000225519 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
SHPK-201ENST00000225519 REC8O95072 547 aa17.36■□□□□ 0.37
SHPK-201ENST00000225519 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
SHPK-201ENST00000225519 TTC22Q5TAA0 569 aa17.36■□□□□ 0.37
SHPK-201ENST00000225519 CCDC94Q9BW85 323 aaPredicted RBP17.36■□□□□ 0.37
SHPK-201ENST00000225519 UGGT1Q9NYU2 1555 aa17.35■□□□□ 0.37
SHPK-201ENST00000225519 SIRT2Q8IXJ6 389 aa17.35■□□□□ 0.37
SHPK-201ENST00000225519 TSC1Q92574 1164 aa17.35■□□□□ 0.37
SHPK-201ENST00000225519 NSFL1CQ9UNZ2 370 aaKnown RBP17.35■□□□□ 0.37
SHPK-201ENST00000225519 NEK4P51957 841 aa17.35■□□□□ 0.37
SHPK-201ENST00000225519 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHPK-201ENST00000225519 NSD2O96028 1365 aa17.35■□□□□ 0.37
SHPK-201ENST00000225519 CYP2E1P05181 493 aaPredicted RBP17.34■□□□□ 0.37
SHPK-201ENST00000225519 CBX1P83916 185 aa17.34■□□□□ 0.37
SHPK-201ENST00000225519 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
SHPK-201ENST00000225519 ZNF428Q96B54 188 aa17.34■□□□□ 0.37
SHPK-201ENST00000225519 ZNF830Q96NB3 372 aaPredicted RBP17.34■□□□□ 0.37
SHPK-201ENST00000225519 API5Q9BZZ5 524 aaKnown RBP17.34■□□□□ 0.37
SHPK-201ENST00000225519 ANKRD36BQ8N2N9 1353 aa17.34■□□□□ 0.37
SHPK-201ENST00000225519 HMOX1P09601 288 aa17.34■□□□□ 0.37
SHPK-201ENST00000225519 MRPL50Q8N5N7 158 aaKnown RBP17.34■□□□□ 0.37
SHPK-201ENST00000225519 ADGRL1O94910 1474 aa17.33■□□□□ 0.37
SHPK-201ENST00000225519 PLCH2O75038 1416 aa17.33■□□□□ 0.37
SHPK-201ENST00000225519 TSPYL6Q8N831 410 aa17.33■□□□□ 0.37
SHPK-201ENST00000225519 ABCA6Q8N139 1617 aa17.33■□□□□ 0.37
SHPK-201ENST00000225519 CFAP74Q9C0B2 1584 aa17.33■□□□□ 0.37
SHPK-201ENST00000225519 PHF14O94880 888 aa17.33■□□□□ 0.36
SHPK-201ENST00000225519 C14orf93Q9H972 538 aaKnown RBP17.33■□□□□ 0.36
SHPK-201ENST00000225519 MAP3K4Q9Y6R4 1608 aa17.32■□□□□ 0.36
SHPK-201ENST00000225519 HMGN5P82970 282 aaKnown RBP17.32■□□□□ 0.36
SHPK-201ENST00000225519 VAMP4O75379 141 aa17.32■□□□□ 0.36
SHPK-201ENST00000225519 SMARCA5O60264 1052 aaPredicted RBP17.32■□□□□ 0.36
SHPK-201ENST00000225519 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
SHPK-201ENST00000225519 SDSP20132 328 aa17.31■□□□□ 0.36
SHPK-201ENST00000225519 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
SHPK-201ENST00000225519 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
SHPK-201ENST00000225519 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
SHPK-201ENST00000225519 ARHGAP45Q92619 1136 aa17.31■□□□□ 0.36
SHPK-201ENST00000225519 ZDHHC9Q9Y397 364 aa17.31■□□□□ 0.36
SHPK-201ENST00000225519 MYOM2P54296 1465 aa17.31■□□□□ 0.36
SHPK-201ENST00000225519 FAM177BA6PVY3 158 aa17.31■□□□□ 0.36
SHPK-201ENST00000225519 GNAI1P63096 354 aa17.31■□□□□ 0.36
SHPK-201ENST00000225519 MYRIPQ8NFW9 859 aa17.31■□□□□ 0.36
SHPK-201ENST00000225519 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
SHPK-201ENST00000225519 GDPD2Q9HCC8 539 aa17.3■□□□□ 0.36
SHPK-201ENST00000225519 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
SHPK-201ENST00000225519 USP25Q9UHP3 1055 aa17.3■□□□□ 0.36
SHPK-201ENST00000225519 ERC2O15083 957 aa17.29■□□□□ 0.36
SHPK-201ENST00000225519 KIAA1210Q9ULL0 1709 aa17.29■□□□□ 0.36
SHPK-201ENST00000225519 FCHSD2O94868 740 aa17.29■□□□□ 0.36
SHPK-201ENST00000225519 CHAF1AQ13111 956 aaPredicted RBP17.29■□□□□ 0.36
SHPK-201ENST00000225519 MCCP23508 829 aa17.28■□□□□ 0.36
SHPK-201ENST00000225519 NOLC1Q14978 699 aaKnown RBP eCLIP17.28■□□□□ 0.36
SHPK-201ENST00000225519 GGT6Q6P531 493 aa17.28■□□□□ 0.36
SHPK-201ENST00000225519 TMX3Q96JJ7 454 aa17.28■□□□□ 0.36
SHPK-201ENST00000225519 DCTPP1Q9H773 170 aa17.28■□□□□ 0.36
SHPK-201ENST00000225519 TTC12Q9H892 705 aaPredicted RBP17.28■□□□□ 0.36
SHPK-201ENST00000225519 KIF3AQ9Y496 699 aa17.28■□□□□ 0.36
SHPK-201ENST00000225519 C17orf53Q8N3J3 647 aaPredicted RBP17.28■□□□□ 0.36
SHPK-201ENST00000225519 PRIMPOLQ96LW4 560 aa17.28■□□□□ 0.36
SHPK-201ENST00000225519 PPP4R3BQ5MIZ7 849 aa17.27■□□□□ 0.36
SHPK-201ENST00000225519 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.36
SHPK-201ENST00000225519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.27■□□□□ 0.36
SHPK-201ENST00000225519 MINK1Q8N4C8 1332 aaPredicted RBP17.27■□□□□ 0.36
SHPK-201ENST00000225519 FYB1O15117 783 aa17.26■□□□□ 0.35
SHPK-201ENST00000225519 DMTNQ08495 405 aa17.26■□□□□ 0.35
SHPK-201ENST00000225519 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
SHPK-201ENST00000225519 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
SHPK-201ENST00000225519 FBLN1P23142 703 aa17.25■□□□□ 0.35
SHPK-201ENST00000225519 MBIPQ9NS73 344 aa17.25■□□□□ 0.35
SHPK-201ENST00000225519 A0A1W2PP64 1363 aa17.25■□□□□ 0.35
SHPK-201ENST00000225519 ADGRB2O60241 1585 aa17.25■□□□□ 0.35
SHPK-201ENST00000225519 ABCC4O15439 1325 aa17.24■□□□□ 0.35
SHPK-201ENST00000225519 ADCY5O95622 1261 aa17.24■□□□□ 0.35
SHPK-201ENST00000225519 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
SHPK-201ENST00000225519 PIBF1Q8WXW3 757 aa17.24■□□□□ 0.35
SHPK-201ENST00000225519 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
SHPK-201ENST00000225519 ANO2Q9NQ90 1003 aa17.24■□□□□ 0.35
SHPK-201ENST00000225519 TET3O43151 1660 aa17.24■□□□□ 0.35
SHPK-201ENST00000225519 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
SHPK-201ENST00000225519 FAM184AQ8NB25 1140 aa17.23■□□□□ 0.35
SHPK-201ENST00000225519 MCM2P49736 904 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms