RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 SRGAP3O43295 1099 aa17.72■□□□□ 0.43
NDFIP2-201ENST00000218652 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
NDFIP2-201ENST00000218652 UPF3BQ9BZI7 483 aaKnown RBP17.72■□□□□ 0.43
NDFIP2-201ENST00000218652 DEF6Q9H4E7 631 aa17.72■□□□□ 0.43
NDFIP2-201ENST00000218652 CCDC158Q5M9N0 1113 aa17.72■□□□□ 0.43
NDFIP2-201ENST00000218652 CWC27Q6UX04 472 aaKnown RBP17.72■□□□□ 0.43
NDFIP2-201ENST00000218652 DHX37Q8IY37 1157 aaKnown RBP17.72■□□□□ 0.43
NDFIP2-201ENST00000218652 CENPHQ9H3R5 247 aa17.72■□□□□ 0.43
NDFIP2-201ENST00000218652 ANKRD1Q15327 319 aa17.72■□□□□ 0.43
NDFIP2-201ENST00000218652 PRAM1Q96QH2 718 aa17.72■□□□□ 0.43
NDFIP2-201ENST00000218652 ATF3P18847 181 aa17.71■□□□□ 0.43
NDFIP2-201ENST00000218652 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.43
NDFIP2-201ENST00000218652 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
NDFIP2-201ENST00000218652 CIZ1Q9ULV3 898 aaPredicted RBP17.71■□□□□ 0.43
NDFIP2-201ENST00000218652 SYCE3A1L190 88 aa17.71■□□□□ 0.43
NDFIP2-201ENST00000218652 CCT4P50991 539 aaKnown RBP17.71■□□□□ 0.43
NDFIP2-201ENST00000218652 NUP62CLQ9H1M0 184 aa17.71■□□□□ 0.43
NDFIP2-201ENST00000218652 IGF1RP08069 1367 aa17.7■□□□□ 0.42
NDFIP2-201ENST00000218652 ATP2B2Q01814 1243 aa17.7■□□□□ 0.42
NDFIP2-201ENST00000218652 NUP133Q8WUM0 1156 aa17.7■□□□□ 0.42
NDFIP2-201ENST00000218652 WIZO95785 1651 aa17.7■□□□□ 0.42
NDFIP2-201ENST00000218652 CEP57L1Q8IYX8 460 aa17.7■□□□□ 0.42
NDFIP2-201ENST00000218652 CABP1Q9NZU7 370 aa17.7■□□□□ 0.42
NDFIP2-201ENST00000218652 LRRFIP2Q9Y608 721 aaKnown RBP17.7■□□□□ 0.42
NDFIP2-201ENST00000218652 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
NDFIP2-201ENST00000218652 CCDC181Q5TID7 509 aa17.7■□□□□ 0.42
NDFIP2-201ENST00000218652 KLHL34Q8N239 644 aa17.7■□□□□ 0.42
NDFIP2-201ENST00000218652 FKBP4Q02790 459 aaKnown RBP eCLIP17.69■□□□□ 0.42
NDFIP2-201ENST00000218652 SYCP1Q15431 976 aa17.69■□□□□ 0.42
NDFIP2-201ENST00000218652 ZSCAN30Q86W11 494 aa17.69■□□□□ 0.42
NDFIP2-201ENST00000218652 WDR63Q8IWG1 891 aa17.69■□□□□ 0.42
NDFIP2-201ENST00000218652 PDCL3Q9H2J4 239 aa17.69■□□□□ 0.42
NDFIP2-201ENST00000218652 EXOC6BQ9Y2D4 811 aa17.69■□□□□ 0.42
NDFIP2-201ENST00000218652 DDX11Q96FC9 970 aa17.69■□□□□ 0.42
NDFIP2-201ENST00000218652 TANGO6Q9C0B7 1094 aa17.69■□□□□ 0.42
NDFIP2-201ENST00000218652 TTC39AQ5SRH9 613 aa17.68■□□□□ 0.42
NDFIP2-201ENST00000218652 AACSQ86V21 672 aa17.68■□□□□ 0.42
NDFIP2-201ENST00000218652 GOLGA6L10A6NI86 522 aa17.68■□□□□ 0.42
NDFIP2-201ENST00000218652 TXNDC2Q86VQ3 553 aa17.68■□□□□ 0.42
NDFIP2-201ENST00000218652 PDRG1Q9NUG6 133 aa17.68■□□□□ 0.42
NDFIP2-201ENST00000218652 ERLIN1O75477 346 aa17.67■□□□□ 0.42
NDFIP2-201ENST00000218652 FAM193AP78312 1265 aa17.67■□□□□ 0.42
NDFIP2-201ENST00000218652 UBXN4Q92575 508 aa17.67■□□□□ 0.42
NDFIP2-201ENST00000218652 KIAA0754O94854 1291 aa17.67■□□□□ 0.42
NDFIP2-201ENST00000218652 TAX1BP1Q86VP1 789 aa17.67■□□□□ 0.42
NDFIP2-201ENST00000218652 ERICH4A6NGS2 130 aa17.67■□□□□ 0.42
NDFIP2-201ENST00000218652 STIM1Q13586 685 aa17.67■□□□□ 0.42
NDFIP2-201ENST00000218652 SLC3A2P08195 630 aaKnown RBP17.67■□□□□ 0.42
NDFIP2-201ENST00000218652 PAF1Q8N7H5 531 aa17.67■□□□□ 0.42
NDFIP2-201ENST00000218652 CFAP45Q9UL16 551 aa17.67■□□□□ 0.42
NDFIP2-201ENST00000218652 MYL6BP14649 208 aa17.66■□□□□ 0.42
NDFIP2-201ENST00000218652 ESCO1Q5FWF5 840 aa17.66■□□□□ 0.42
NDFIP2-201ENST00000218652 ZNF530Q6P9A1 599 aaPredicted RBP17.66■□□□□ 0.42
NDFIP2-201ENST00000218652 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
NDFIP2-201ENST00000218652 SSBP05455 408 aaKnown RBP eCLIP17.66■□□□□ 0.42
NDFIP2-201ENST00000218652 NACAP1Q9BZK3 213 aa17.66■□□□□ 0.42
NDFIP2-201ENST00000218652 TMEM57Q8N5G2 664 aa17.66■□□□□ 0.42
NDFIP2-201ENST00000218652 LUC7LQ9NQ29 371 aaKnown RBP17.66■□□□□ 0.42
NDFIP2-201ENST00000218652 RRP9O43818 475 aaKnown RBP17.65■□□□□ 0.42
NDFIP2-201ENST00000218652 CAMK4Q16566 473 aa17.65■□□□□ 0.42
NDFIP2-201ENST00000218652 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.42
NDFIP2-201ENST00000218652 ERLIN2O94905 339 aa17.65■□□□□ 0.42
NDFIP2-201ENST00000218652 TMEM132AQ24JP5 1023 aa17.65■□□□□ 0.42
NDFIP2-201ENST00000218652 CFAP100Q494V2 611 aa17.65■□□□□ 0.42
NDFIP2-201ENST00000218652 PDCL2Q8N4E4 241 aa17.65■□□□□ 0.42
NDFIP2-201ENST00000218652 CCDC102AQ96A19 550 aa17.65■□□□□ 0.42
NDFIP2-201ENST00000218652 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
NDFIP2-201ENST00000218652 ANKRD62A6NC57 917 aa17.64■□□□□ 0.41
NDFIP2-201ENST00000218652 EIF3JO75822 258 aaKnown RBP17.64■□□□□ 0.41
NDFIP2-201ENST00000218652 DDX54Q8TDD1 881 aaKnown RBP17.64■□□□□ 0.41
NDFIP2-201ENST00000218652 DACH1Q9UI36 760 aa17.64■□□□□ 0.41
NDFIP2-201ENST00000218652 CCDC69A6NI79 296 aa17.64■□□□□ 0.41
NDFIP2-201ENST00000218652 FAM69CQ0P6D2 419 aa17.64■□□□□ 0.41
NDFIP2-201ENST00000218652 DHX8Q14562 1220 aaKnown RBP17.64■□□□□ 0.41
NDFIP2-201ENST00000218652 THUMPD2Q9BTF0 503 aaKnown RBP17.64■□□□□ 0.41
NDFIP2-201ENST00000218652 MAP3K11Q16584 847 aa17.63■□□□□ 0.41
NDFIP2-201ENST00000218652 ARHGAP29Q52LW3 1261 aa17.63■□□□□ 0.41
NDFIP2-201ENST00000218652 KIF6Q6ZMV9 814 aa17.63■□□□□ 0.41
NDFIP2-201ENST00000218652 RPAP2Q8IXW5 612 aaPredicted RBP17.63■□□□□ 0.41
NDFIP2-201ENST00000218652 STRN4Q9NRL3 753 aa17.63■□□□□ 0.41
NDFIP2-201ENST00000218652 CEP126Q9P2H0 1117 aa17.63■□□□□ 0.41
NDFIP2-201ENST00000218652 ZSCAN31Q96LW9 406 aaPredicted RBP17.62■□□□□ 0.41
NDFIP2-201ENST00000218652 CCDC85AQ96PX6 553 aaPredicted RBP17.62■□□□□ 0.41
NDFIP2-201ENST00000218652 C20orf194Q5TEA3 1177 aa17.62■□□□□ 0.41
NDFIP2-201ENST00000218652 PIBF1Q8WXW3 757 aa17.62■□□□□ 0.41
NDFIP2-201ENST00000218652 CBFA2T2O43439 604 aa17.62■□□□□ 0.41
NDFIP2-201ENST00000218652 CCDC57Q2TAC2 916 aa17.62■□□□□ 0.41
NDFIP2-201ENST00000218652 NUTM1Q86Y26 1132 aa17.62■□□□□ 0.41
NDFIP2-201ENST00000218652 CASTP20810 708 aaKnown RBP17.62■□□□□ 0.41
NDFIP2-201ENST00000218652 RRS1Q15050 365 aaKnown RBP17.61■□□□□ 0.41
NDFIP2-201ENST00000218652 MPHOSPH8Q99549 860 aa17.61■□□□□ 0.41
NDFIP2-201ENST00000218652 TAF3Q5VWG9 929 aa17.61■□□□□ 0.41
NDFIP2-201ENST00000218652 GPRASP1Q5JY77 1395 aa17.61■□□□□ 0.41
NDFIP2-201ENST00000218652 CCDC83Q8IWF9 413 aa17.61■□□□□ 0.41
NDFIP2-201ENST00000218652 CDK19Q9BWU1 502 aa17.61■□□□□ 0.41
NDFIP2-201ENST00000218652 GNL3LQ9NVN8 582 aaKnown RBP17.61■□□□□ 0.41
NDFIP2-201ENST00000218652 TATP17735 454 aaPredicted RBP17.6■□□□□ 0.41
NDFIP2-201ENST00000218652 SMG6Q86US8 1419 aaKnown RBP17.6■□□□□ 0.41
NDFIP2-201ENST00000218652 EPB41L2O43491 1005 aaKnown RBP17.6■□□□□ 0.41
NDFIP2-201ENST00000218652 XPCQ01831 940 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms