RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 UBAP1LF5GYI3 381 aa29.12■■■□□ 2.25
HOXC8-201ENST00000040584 HOXC9P31274 260 aa29.12■■■□□ 2.25
HOXC8-201ENST00000040584 EIF4A2Q14240 407 aaKnown RBP29.12■■■□□ 2.25
HOXC8-201ENST00000040584 LTN1O94822 1766 aa29.12■■■□□ 2.25
HOXC8-201ENST00000040584 KIF24Q5T7B8 1368 aa29.11■■■□□ 2.25
HOXC8-201ENST00000040584 SALL2Q9Y467 1007 aaPredicted RBP29.11■■■□□ 2.25
HOXC8-201ENST00000040584 ARHGEF25Q86VW2 580 aa29.1■■■□□ 2.25
HOXC8-201ENST00000040584 CERKQ8TCT0 537 aa29.1■■■□□ 2.25
HOXC8-201ENST00000040584 ZC3H6P61129 1189 aaKnown RBP29.08■■■□□ 2.25
HOXC8-201ENST00000040584 AHDC1Q5TGY3 1603 aaPredicted RBP29.08■■■□□ 2.25
HOXC8-201ENST00000040584 IQSEC2Q5JU85 1478 aa29.08■■■□□ 2.25
HOXC8-201ENST00000040584 IP6K1Q92551 441 aa29.08■■■□□ 2.25
HOXC8-201ENST00000040584 RTL1A6NKG5 1358 aa29.07■■■□□ 2.24
HOXC8-201ENST00000040584 PHRF1Q9P1Y6 1649 aaKnown RBP29.07■■■□□ 2.24
HOXC8-201ENST00000040584 RUNDC1Q96C34 613 aa29.07■■■□□ 2.24
HOXC8-201ENST00000040584 APAF1O14727 1248 aa29.06■■■□□ 2.24
HOXC8-201ENST00000040584 CRYBG1Q9Y4K1 1723 aa29.05■■■□□ 2.24
HOXC8-201ENST00000040584 HMOX1P09601 288 aa29.05■■■□□ 2.24
HOXC8-201ENST00000040584 LRRC59Q96AG4 307 aaKnown RBP29.04■■■□□ 2.24
HOXC8-201ENST00000040584 LTV1Q96GA3 475 aaPredicted RBP29.03■■■□□ 2.24
HOXC8-201ENST00000040584 PLEKHF1Q96S99 279 aa29.03■■■□□ 2.24
HOXC8-201ENST00000040584 FCHSD2O94868 740 aa29.02■■■□□ 2.24
HOXC8-201ENST00000040584 RSPH6AQ9H0K4 717 aa29.02■■■□□ 2.24
HOXC8-201ENST00000040584 TCP11L2Q8N4U5 519 aa29■■■□□ 2.23
HOXC8-201ENST00000040584 PRKAR2BP31323 418 aa28.99■■■□□ 2.23
HOXC8-201ENST00000040584 AXIN2Q9Y2T1 843 aa28.99■■■□□ 2.23
HOXC8-201ENST00000040584 PHLPP1O60346 1717 aa28.99■■■□□ 2.23
HOXC8-201ENST00000040584 HAP1P54257 671 aaPredicted RBP28.98■■■□□ 2.23
HOXC8-201ENST00000040584 SULT6B1Q6IMI4 303 aa28.98■■■□□ 2.23
HOXC8-201ENST00000040584 AEBP1Q8IUX7 1158 aa28.98■■■□□ 2.23
HOXC8-201ENST00000040584 PNNQ9H307 717 aaKnown RBP28.98■■■□□ 2.23
HOXC8-201ENST00000040584 EYA1Q99502 592 aa28.97■■■□□ 2.23
HOXC8-201ENST00000040584 KIAA0232Q92628 1395 aa28.97■■■□□ 2.23
HOXC8-201ENST00000040584 RGPD1P0DJD0 1748 aa28.97■■■□□ 2.23
HOXC8-201ENST00000040584 RRP7AQ9Y3A4 280 aaKnown RBP28.97■■■□□ 2.23
HOXC8-201ENST00000040584 MAPK8IP3Q9UPT6 1336 aa28.95■■■□□ 2.23
HOXC8-201ENST00000040584 CHRNA2Q15822 529 aa28.95■■■□□ 2.23
HOXC8-201ENST00000040584 COL16A1Q07092 1604 aaPredicted RBP28.95■■■□□ 2.22
HOXC8-201ENST00000040584 CPDO75976 1380 aa28.95■■■□□ 2.22
HOXC8-201ENST00000040584 NEUROD2Q15784 382 aa28.95■■■□□ 2.22
HOXC8-201ENST00000040584 NGEFQ8N5V2 710 aa28.95■■■□□ 2.22
HOXC8-201ENST00000040584 ABCA3Q99758 1704 aa28.94■■■□□ 2.22
HOXC8-201ENST00000040584 IGSF1Q8N6C5 1336 aa28.93■■■□□ 2.22
HOXC8-201ENST00000040584 ZNF521Q96K83 1311 aa28.92■■■□□ 2.22
HOXC8-201ENST00000040584 ANKRD24Q8TF21 1146 aa28.92■■■□□ 2.22
HOXC8-201ENST00000040584 PHACTR3Q96KR7 559 aa28.92■■■□□ 2.22
HOXC8-201ENST00000040584 RGPD5Q99666 1765 aa28.91■■■□□ 2.22
HOXC8-201ENST00000040584 COL18A1P39060 1754 aa28.9■■■□□ 2.22
HOXC8-201ENST00000040584 NEFMP07197 916 aa28.9■■■□□ 2.22
HOXC8-201ENST00000040584 PDE3BQ13370 1112 aa28.9■■■□□ 2.22
HOXC8-201ENST00000040584 PRDM11Q9NQV5 511 aa28.9■■■□□ 2.22
HOXC8-201ENST00000040584 TMPOP42166 694 aaKnown RBP28.89■■■□□ 2.21
HOXC8-201ENST00000040584 NBPF6Q5VWK0 638 aa28.89■■■□□ 2.21
HOXC8-201ENST00000040584 NBPF4Q96M43 638 aa28.89■■■□□ 2.21
HOXC8-201ENST00000040584 USHBP1Q8N6Y0 703 aa28.88■■■□□ 2.21
HOXC8-201ENST00000040584 NCBP3Q53F19 620 aaKnown RBP28.87■■■□□ 2.21
HOXC8-201ENST00000040584 PPP4R2Q9NY27 417 aa28.87■■■□□ 2.21
HOXC8-201ENST00000040584 KDRP35968 1356 aa28.87■■■□□ 2.21
HOXC8-201ENST00000040584 COL22A1Q8NFW1 1626 aaPredicted RBP28.87■■■□□ 2.21
HOXC8-201ENST00000040584 ERBB3P21860 1342 aa28.86■■■□□ 2.21
HOXC8-201ENST00000040584 CDCA7LQ96GN5 454 aa28.85■■■□□ 2.21
HOXC8-201ENST00000040584 WWC1Q8IX03 1113 aa28.85■■■□□ 2.21
HOXC8-201ENST00000040584 PHF23Q9BUL5 403 aaPredicted RBP28.85■■■□□ 2.21
HOXC8-201ENST00000040584 RGPD2P0DJD1 1756 aa28.84■■■□□ 2.21
HOXC8-201ENST00000040584 ABCC6O95255 1503 aa28.84■■■□□ 2.21
HOXC8-201ENST00000040584 RIPK4P57078 832 aa28.83■■■□□ 2.2
HOXC8-201ENST00000040584 FAM83GA6ND36 823 aa28.82■■■□□ 2.2
HOXC8-201ENST00000040584 NFE2L2Q16236 605 aa28.82■■■□□ 2.2
HOXC8-201ENST00000040584 CCDC27Q2M243 656 aa28.82■■■□□ 2.2
HOXC8-201ENST00000040584 CSB-PGBD3P0DP91 1061 aa28.8■■■□□ 2.2
HOXC8-201ENST00000040584 GOLGA2Q08379 1002 aa28.8■■■□□ 2.2
HOXC8-201ENST00000040584 TRIM35Q9UPQ4 493 aa28.8■■■□□ 2.2
HOXC8-201ENST00000040584 CAMTA1Q9Y6Y1 1673 aa28.79■■■□□ 2.2
HOXC8-201ENST00000040584 LMO7Q8WWI1 1683 aa28.78■■■□□ 2.2
HOXC8-201ENST00000040584 NLRP2Q9NX02 1062 aa28.78■■■□□ 2.2
HOXC8-201ENST00000040584 SPINK5Q9NQ38 1064 aaPredicted RBP28.76■■■□□ 2.19
HOXC8-201ENST00000040584 NUTM2BA6NNL0 878 aaPredicted RBP28.75■■■□□ 2.19
HOXC8-201ENST00000040584 NUTM2EB1AL46 878 aaPredicted RBP28.75■■■□□ 2.19
HOXC8-201ENST00000040584 NUTM2AQ8IVF1 878 aaPredicted RBP28.75■■■□□ 2.19
HOXC8-201ENST00000040584 RBM19Q9Y4C8 960 aaKnown RBP28.75■■■□□ 2.19
HOXC8-201ENST00000040584 NCAPD2Q15021 1401 aa28.75■■■□□ 2.19
HOXC8-201ENST00000040584 ADAMTS2O95450 1211 aa28.74■■■□□ 2.19
HOXC8-201ENST00000040584 MTHFSDQ2M296 383 aaKnown RBP28.74■■■□□ 2.19
HOXC8-201ENST00000040584 COL5A2P05997 1499 aaPredicted RBP28.73■■■□□ 2.19
HOXC8-201ENST00000040584 SLFN5Q08AF3 891 aa28.72■■■□□ 2.19
HOXC8-201ENST00000040584 WDR63Q8IWG1 891 aa28.72■■■□□ 2.19
HOXC8-201ENST00000040584 JCADQ9P266 1359 aa28.72■■■□□ 2.19
HOXC8-201ENST00000040584 HSPA1LP34931 641 aa28.71■■■□□ 2.19
HOXC8-201ENST00000040584 STRN4Q9NRL3 753 aa28.71■■■□□ 2.19
HOXC8-201ENST00000040584 WDR17Q8IZU2 1322 aa28.71■■■□□ 2.19
HOXC8-201ENST00000040584 DLG5Q8TDM6 1919 aa28.7■■■□□ 2.19
HOXC8-201ENST00000040584 TRMT2AQ8IZ69 625 aaKnown RBP28.7■■■□□ 2.19
HOXC8-201ENST00000040584 BTG4Q9NY30 223 aa28.7■■■□□ 2.19
HOXC8-201ENST00000040584 EVA1CP58658 441 aa28.7■■■□□ 2.18
HOXC8-201ENST00000040584 DUSP27Q5VZP5 1158 aa28.7■■■□□ 2.18
HOXC8-201ENST00000040584 FAM208AQ9UK61 1670 aaKnown RBP28.69■■■□□ 2.18
HOXC8-201ENST00000040584 E9PSI1 815 aa28.69■■■□□ 2.18
HOXC8-201ENST00000040584 IRX6P78412 446 aaPredicted RBP28.69■■■□□ 2.18
HOXC8-201ENST00000040584 COL14A1Q05707 1796 aaKnown RBP28.69■■■□□ 2.18
HOXC8-201ENST00000040584 GAS2L2Q8NHY3 880 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms