RNA–Protein interactions for RNA: ENSMUST00000148811.1

Ttc39b-206, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 3 BASIC

Gene Ttc39b, Length 727 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-206ENSMUST00000148811 Ppp2r1aQ76MZ3 589 aa14.14□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 Nol11Q8BJW5 723 aaKnown RBP14.14□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 Sall2Q9QX96 1004 aa14.13□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 Slit1Q80TR4 1531 aa14.12□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 InhbeO08717 350 aa14.12□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 RgmbQ7TQ33 436 aa14.12□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 Ccdc129Q14B48 1034 aa14.11□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 CrklP47941 303 aa14.1□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 Ccne1Q61457 408 aa14.1□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 OptnQ8K3K8 584 aa14.1□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 Spef2Q8C9J3 1734 aa14.1□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 Rad17Q6NXW6 688 aa14.09□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 Sgsm1Q8BPQ7 1093 aa14.09□□□□□ -0.15
Ttc39b-206ENSMUST00000148811 Nwd2Q6P5U7 1742 aa14.08□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Eif4a2P10630 407 aa14.08□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Ppp1r15aP17564 657 aa14.08□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Col15a1O35206 1367 aa14.08□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Nup153E9Q3G8 1462 aaKnown RBP14.07□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Rsph6aQ8CDR2 708 aa14.07□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Tnks1bp1P58871 1720 aa14.07□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Ly75Q60767 1723 aa14.07□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Sf3b2Q3UJB0 878 aaKnown RBP14.06□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Slc12a5Q91V14 1138 aa14.06□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Ahnak2E9PYB0 1738 aaKnown RBP14.06□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Wwc2Q6NXJ0 1187 aa14.05□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Kdm6aO70546 1401 aa14.05□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Adgrb1Q3UHD1 1582 aa14.05□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Eya1P97767 591 aa14.04□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Q7TT23 1179 aa14.04□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Rpgrip1lQ8CG73 1264 aa14.04□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Exoc6Q8R313 802 aa14.04□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Nlrp6Q91WS2 869 aa14.04□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Zeb2Q9R0G7 1215 aa14.04□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Arfgef2A2A5R2 1792 aa14.03□□□□□ -0.16
Ttc39b-206ENSMUST00000148811 Pak3Q61036 559 aa14.02□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Kiaa1107Q80TK0 1369 aa14.01□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 MpripP97434 1024 aa14.01□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Pm20d1Q8C165 503 aa14.01□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 TkfcQ8VC30 578 aa14.01□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Anp32bQ9EST5 272 aaKnown RBP14.01□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Simc1E9Q6E9 1354 aa14□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 PnisrA2AJT4 805 aaKnown RBP14□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Plekhd1B2RPU2 505 aa14□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Gm10471E9Q1C7 252 aa14□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Zranb3Q6NZP1 1069 aa14□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Zpr1Q62384 459 aa13.99□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Ppp1r37Q8BKR5 712 aa13.99□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 PalmQ9Z0P4 383 aa13.99□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Col22a1E9Q7P1 1613 aa13.98□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Supt5hO55201 1082 aaKnown RBP13.98□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Tsen2Q6P7W5 460 aa13.98□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Mcm10Q0VBD2 885 aa13.97□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 GsdmaQ9EST1 446 aa13.97□□□□□ -0.17
Ttc39b-206ENSMUST00000148811 Atf7ipQ7TT18 1306 aa13.95□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 MpndQ3TV65 487 aa13.95□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Cc2d1aQ8K1A6 943 aa13.95□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Trpm3Q5F4S9 1721 aa13.95□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 TnikP83510 1323 aa13.94□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 PappaQ8R4K8 1624 aa13.94□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Ankrd23Q812A3 306 aa13.94□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Plin1Q8CGN5 517 aa13.94□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 U2af1Q9D883 239 aaKnown RBP13.94□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Mst1rQ62190 1378 aa13.94□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Aplp2Q06335 707 aa13.93□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Mrs2Q5NCE8 434 aa13.93□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Tcerg1Q8CGF7 1100 aaKnown RBP13.93□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Fam50bQ9WTJ8 334 aa13.93□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Sik1Q60670 779 aa13.92□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Taok3Q8BYC6 898 aa13.92□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Abca3Q8R420 1704 aa13.92□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Tns2Q8CGB6 1400 aa13.91□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Kcnh4A2A5F7 1018 aa13.91□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Vps33bP59016 617 aa13.91□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 ThemisQ8BGW0 636 aa13.91□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Ginm1Q91WR6 327 aa13.91□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Rgs17Q9QZB0 210 aa13.91□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 GakQ99KY4 1305 aa13.9□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Myo5bP21271 1818 aa13.9□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.9□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 Shank3Q4ACU6 1730 aa13.9□□□□□ -0.18
Ttc39b-206ENSMUST00000148811 4930523C07RikE9Q2T4 99 aa13.89□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Zscan21Q07231 555 aa13.89□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Ddb1Q3U1J4 1140 aaKnown RBP13.89□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Ubr2Q6WKZ8 1755 aa13.88□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Zfp777B9EKF4 885 aa13.88□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Ubap1lG3UW59 384 aa13.88□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 4930572O03RikQ8C5Y0 211 aa13.88□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Sugp2Q8CH09 1067 aa13.88□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Speer4bQ9D9F7 267 aa13.88□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Tjp1P39447 1745 aaKnown RBP13.87□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Adamtsl1Q8BLI0 1745 aa13.87□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Gm21680A0A0G2JGR8 267 aa13.87□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Exoc5Q3TPX4 708 aa13.87□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Fchsd2Q3USJ8 740 aa13.87□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Q4VA45 678 aa13.87□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Larp1Q6ZQ58 1072 aaKnown RBP13.87□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Elp1Q7TT37 1333 aaKnown RBP13.87□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Slc4a2P13808 1237 aaKnown RBP13.86□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Kiaa0319Q5SZV5 1081 aa13.86□□□□□ -0.19
Ttc39b-206ENSMUST00000148811 Gsdma3Q5Y4Y6 464 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms