RNA–Protein interactions for RNA: ENSMUST00000148811.1

Ttc39b-206, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 3 BASIC

Gene Ttc39b, Length 727 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-206ENSMUST00000148811 Gm35339A0A140LHH9 1649 aa23.57■■□□□ 1.36
Ttc39b-206ENSMUST00000148811 NischQ80TM9 1593 aa23.25■■□□□ 1.31
Ttc39b-206ENSMUST00000148811 Abcc9P70170 1546 aa22.55■■□□□ 1.2
Ttc39b-206ENSMUST00000148811 Abcc8B2RUS7 1588 aa22.43■■□□□ 1.18
Ttc39b-206ENSMUST00000148811 ScribQ80U72 1612 aa21.59■■□□□ 1.05
Ttc39b-206ENSMUST00000148811 Kdm5dQ62240 1548 aa20.86■□□□□ 0.93
Ttc39b-206ENSMUST00000148811 NacadQ5SWP3 1504 aa20.82■□□□□ 0.92
Ttc39b-206ENSMUST00000148811 Dcaf1Q80TR8 1506 aa20.66■□□□□ 0.9
Ttc39b-206ENSMUST00000148811 Sycp2Q9CUU3 1500 aa20.42■□□□□ 0.86
Ttc39b-206ENSMUST00000148811 Rb1cc1Q9ESK9 1588 aa20.3■□□□□ 0.84
Ttc39b-206ENSMUST00000148811 BicraF8VPZ9 1578 aa20.17■□□□□ 0.82
Ttc39b-206ENSMUST00000148811 Rhox8Q6VSS7 320 aa20.15■□□□□ 0.82
Ttc39b-206ENSMUST00000148811 Ccdc180J3QNE4 1664 aa20.1■□□□□ 0.81
Ttc39b-206ENSMUST00000148811 Baz1aO88379 1555 aa20.01■□□□□ 0.79
Ttc39b-206ENSMUST00000148811 Crybg2B7ZCC2 1516 aa19.84■□□□□ 0.77
Ttc39b-206ENSMUST00000148811 Zcchc6Q5BLK4 1491 aaKnown RBP19.63■□□□□ 0.73
Ttc39b-206ENSMUST00000148811 Smarca2Q6DIC0 1577 aa19.47■□□□□ 0.71
Ttc39b-206ENSMUST00000148811 Rtl1Q7M732 1744 aa19.46■□□□□ 0.71
Ttc39b-206ENSMUST00000148811 Pds5bQ4VA53 1446 aaKnown RBP19.42■□□□□ 0.7
Ttc39b-206ENSMUST00000148811 Thoc2B1AZI6 1594 aaKnown RBP19.32■□□□□ 0.68
Ttc39b-206ENSMUST00000148811 Atad2bE9Q166 1460 aaKnown RBP19.31■□□□□ 0.68
Ttc39b-206ENSMUST00000148811 Cecr2E9Q2Z1 1453 aa19.3■□□□□ 0.68
Ttc39b-206ENSMUST00000148811 Smarca4Q3TKT4 1613 aaKnown RBP19.3■□□□□ 0.68
Ttc39b-206ENSMUST00000148811 Dnajc5bQ9CQ94 199 aa19.24■□□□□ 0.67
Ttc39b-206ENSMUST00000148811 Iqgap2Q3UQ44 1575 aa19.17■□□□□ 0.66
Ttc39b-206ENSMUST00000148811 Ercc6F8VPZ5 1481 aa19.05■□□□□ 0.64
Ttc39b-206ENSMUST00000148811 Cc2d2aQ8CFW7 1633 aa19■□□□□ 0.63
Ttc39b-206ENSMUST00000148811 Wdr62Q3U3T8 1523 aa18.97■□□□□ 0.63
Ttc39b-206ENSMUST00000148811 Frmpd1A2AKB4 1549 aa18.92■□□□□ 0.62
Ttc39b-206ENSMUST00000148811 Cttnbp2B9EJA2 1648 aa18.92■□□□□ 0.62
Ttc39b-206ENSMUST00000148811 Synj1Q8CHC4 1574 aa18.91■□□□□ 0.62
Ttc39b-206ENSMUST00000148811 Fam135aQ6NS59 1506 aa18.9■□□□□ 0.62
Ttc39b-206ENSMUST00000148811 CftrP26361 1476 aa18.88■□□□□ 0.61
Ttc39b-206ENSMUST00000148811 Unc13aQ4KUS2 1712 aa18.86■□□□□ 0.61
Ttc39b-206ENSMUST00000148811 Ccdc136Q3TVA9 1136 aa18.84■□□□□ 0.61
Ttc39b-206ENSMUST00000148811 Brd4Q9ESU6 1400 aaKnown RBP18.83■□□□□ 0.61
Ttc39b-206ENSMUST00000148811 Phldb1Q6PDH0 1371 aaKnown RBP18.69■□□□□ 0.58
Ttc39b-206ENSMUST00000148811 Baz1bQ9Z277 1479 aa18.57■□□□□ 0.56
Ttc39b-206ENSMUST00000148811 Trim41Q5NCC3 630 aa18.51■□□□□ 0.55
Ttc39b-206ENSMUST00000148811 Ubl4bQ9CQ84 188 aa18.47■□□□□ 0.55
Ttc39b-206ENSMUST00000148811 Esf1Q3V1V3 845 aaKnown RBP18.43■□□□□ 0.54
Ttc39b-206ENSMUST00000148811 Mrc2Q64449 1479 aa18.39■□□□□ 0.54
Ttc39b-206ENSMUST00000148811 Top2bQ64511 1612 aa18.33■□□□□ 0.52
Ttc39b-206ENSMUST00000148811 Lamc3Q9R0B6 1581 aa18.31■□□□□ 0.52
Ttc39b-206ENSMUST00000148811 Rsf1E9PWW9 1441 aaKnown RBP18.3■□□□□ 0.52
Ttc39b-206ENSMUST00000148811 Golga3P55937 1487 aa18.28■□□□□ 0.52
Ttc39b-206ENSMUST00000148811 Kif15Q6P9L6 1387 aa18.26■□□□□ 0.51
Ttc39b-206ENSMUST00000148811 TnnQ80Z71 1560 aa18.21■□□□□ 0.51
Ttc39b-206ENSMUST00000148811 Cux2P70298 1426 aa18.21■□□□□ 0.51
Ttc39b-206ENSMUST00000148811 Kif21aQ9QXL2 1672 aa18.15■□□□□ 0.5
Ttc39b-206ENSMUST00000148811 Cngb1E1AZ71 1325 aa18.14■□□□□ 0.49
Ttc39b-206ENSMUST00000148811 Lrriq1Q0P5X1 1673 aa18.09■□□□□ 0.49
Ttc39b-206ENSMUST00000148811 Fmn1Q05860 1466 aa18.03■□□□□ 0.48
Ttc39b-206ENSMUST00000148811 Camsap1A2AHC3 1581 aa18.03■□□□□ 0.48
Ttc39b-206ENSMUST00000148811 Chic1Q8CBW7 227 aa17.98■□□□□ 0.47
Ttc39b-206ENSMUST00000148811 Cep164Q5DU05 1446 aa17.96■□□□□ 0.47
Ttc39b-206ENSMUST00000148811 Ccdc18Q640L5 1455 aa17.95■□□□□ 0.46
Ttc39b-206ENSMUST00000148811 Npm1Q61937 292 aaKnown RBP17.94■□□□□ 0.46
Ttc39b-206ENSMUST00000148811 Ccdc88bQ4QRL3 1481 aa17.88■□□□□ 0.45
Ttc39b-206ENSMUST00000148811 Il27Q8K3I6 234 aa17.87■□□□□ 0.45
Ttc39b-206ENSMUST00000148811 Dhx29Q6PGC1 1365 aaKnown RBP17.84■□□□□ 0.45
Ttc39b-206ENSMUST00000148811 Crocc2F6XLV1 1638 aa17.83■□□□□ 0.45
Ttc39b-206ENSMUST00000148811 LrpprcQ6PB66 1392 aaKnown RBP17.83■□□□□ 0.45
Ttc39b-206ENSMUST00000148811 Urb2E9Q7L1 1524 aaKnown RBP17.81■□□□□ 0.44
Ttc39b-206ENSMUST00000148811 Eif4g3Q80XI3 1579 aaKnown RBP17.8■□□□□ 0.44
Ttc39b-206ENSMUST00000148811 Top2aQ01320 1528 aaKnown RBP17.77■□□□□ 0.44
Ttc39b-206ENSMUST00000148811 PogzQ8BZH4 1409 aaKnown RBP17.77■□□□□ 0.44
Ttc39b-206ENSMUST00000148811 Plb1Q3TTY0 1478 aa17.76■□□□□ 0.43
Ttc39b-206ENSMUST00000148811 Grin2bQ01097 1482 aa17.75■□□□□ 0.43
Ttc39b-206ENSMUST00000148811 Duox2A2AQ99 1517 aa17.7■□□□□ 0.42
Ttc39b-206ENSMUST00000148811 Setd1bQ8CFT2 1985 aa17.69■□□□□ 0.42
Ttc39b-206ENSMUST00000148811 Samd9lQ69Z37 1561 aa17.65■□□□□ 0.42
Ttc39b-206ENSMUST00000148811 Ift140E9PY46 1464 aa17.6■□□□□ 0.41
Ttc39b-206ENSMUST00000148811 NrkQ9R0G8 1455 aa17.58■□□□□ 0.41
Ttc39b-206ENSMUST00000148811 Efcab5A0JP43 1406 aa17.56■□□□□ 0.4
Ttc39b-206ENSMUST00000148811 Rusc2Q80U22 1514 aa17.55■□□□□ 0.4
Ttc39b-206ENSMUST00000148811 PtprkP35822 1457 aa17.55■□□□□ 0.4
Ttc39b-206ENSMUST00000148811 Shroom4Q1W617 1475 aa17.54■□□□□ 0.4
Ttc39b-206ENSMUST00000148811 Pbrm1Q8BSQ9 1634 aaKnown RBP17.54■□□□□ 0.4
Ttc39b-206ENSMUST00000148811 Disp1Q3TDN0 1521 aa17.53■□□□□ 0.4
Ttc39b-206ENSMUST00000148811 HrcG5E8J6 738 aa17.48■□□□□ 0.39
Ttc39b-206ENSMUST00000148811 Rad54l2Q99NG0 1466 aa17.46■□□□□ 0.39
Ttc39b-206ENSMUST00000148811 Nup160Q9Z0W3 1402 aaKnown RBP17.46■□□□□ 0.39
Ttc39b-206ENSMUST00000148811 Magi3Q9EQJ9 1476 aa17.44■□□□□ 0.38
Ttc39b-206ENSMUST00000148811 SynmQ70IV5 1561 aa17.4■□□□□ 0.38
Ttc39b-206ENSMUST00000148811 Grin2aP35436 1464 aa17.4■□□□□ 0.38
Ttc39b-206ENSMUST00000148811 Shroom2A2ALU4 1481 aa17.38■□□□□ 0.37
Ttc39b-206ENSMUST00000148811 Gpatch8A2A6A1 1505 aa17.38■□□□□ 0.37
Ttc39b-206ENSMUST00000148811 Cc2d2bA0A286YDU8 1405 aa17.37■□□□□ 0.37
Ttc39b-206ENSMUST00000148811 Pla2r1Q62028 1487 aa17.36■□□□□ 0.37
Ttc39b-206ENSMUST00000148811 AqrQ8CFQ3 1481 aaKnown RBP17.31■□□□□ 0.36
Ttc39b-206ENSMUST00000148811 Rapgef2Q8CHG7 1496 aa17.31■□□□□ 0.36
Ttc39b-206ENSMUST00000148811 Mroh2bQ7M6Y6 1581 aa17.29■□□□□ 0.36
Ttc39b-206ENSMUST00000148811 Eif4g1Q6NZJ6 1600 aaKnown RBP17.29■□□□□ 0.36
Ttc39b-206ENSMUST00000148811 Gab3Q8BSM5 595 aa17.28■□□□□ 0.36
Ttc39b-206ENSMUST00000148811 Mapk8ip2Q9ERE9 830 aa17.27■□□□□ 0.36
Ttc39b-206ENSMUST00000148811 Npm2Q80W85 207 aa17.24■□□□□ 0.35
Ttc39b-206ENSMUST00000148811 Arhgap35Q91YM2 1499 aa17.24■□□□□ 0.35
Ttc39b-206ENSMUST00000148811 Abca16E9PWJ7 1678 aa17.23■□□□□ 0.35
Ttc39b-206ENSMUST00000148811 Zeb1Q64318 1117 aa17.22■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms