RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Chd4Q6PDQ2 1915 aaKnown RBP19.19■□□□□ 0.66
Ccdc171-204ENSMUST00000126429 Hoxb7P09024 217 aa19.19■□□□□ 0.66
Ccdc171-204ENSMUST00000126429 Wdr66E9Q743 1299 aa19.18■□□□□ 0.66
Ccdc171-204ENSMUST00000126429 Ccdc129Q14B48 1034 aa19.18■□□□□ 0.66
Ccdc171-204ENSMUST00000126429 RgmbQ7TQ33 436 aa19.16■□□□□ 0.66
Ccdc171-204ENSMUST00000126429 Nol11Q8BJW5 723 aaKnown RBP19.16■□□□□ 0.66
Ccdc171-204ENSMUST00000126429 Mdc1Q5PSV9 1707 aa19.16■□□□□ 0.66
Ccdc171-204ENSMUST00000126429 Hoxc9P09633 260 aa19.14■□□□□ 0.65
Ccdc171-204ENSMUST00000126429 Scn7aB1AYL1 1681 aa19.12■□□□□ 0.65
Ccdc171-204ENSMUST00000126429 Cald1E9QA15 768 aaKnown RBP19.1■□□□□ 0.65
Ccdc171-204ENSMUST00000126429 Ly75Q60767 1723 aa19.09■□□□□ 0.65
Ccdc171-204ENSMUST00000126429 CrklP47941 303 aa19.09■□□□□ 0.65
Ccdc171-204ENSMUST00000126429 OptnQ8K3K8 584 aa19.09■□□□□ 0.65
Ccdc171-204ENSMUST00000126429 Zeb2Q9R0G7 1215 aa19.09■□□□□ 0.65
Ccdc171-204ENSMUST00000126429 Map2P20357 1828 aa19.09■□□□□ 0.65
Ccdc171-204ENSMUST00000126429 Nup153E9Q3G8 1462 aaKnown RBP19.08■□□□□ 0.65
Ccdc171-204ENSMUST00000126429 Rad17Q6NXW6 688 aa19.08■□□□□ 0.65
Ccdc171-204ENSMUST00000126429 Cacna1sQ02789 1880 aa19.07■□□□□ 0.64
Ccdc171-204ENSMUST00000126429 Trim28Q62318 834 aa19.07■□□□□ 0.64
Ccdc171-204ENSMUST00000126429 Pm20d1Q8C165 503 aa19.06■□□□□ 0.64
Ccdc171-204ENSMUST00000126429 Ccne1Q61457 408 aa19.06■□□□□ 0.64
Ccdc171-204ENSMUST00000126429 Taok3Q8BYC6 898 aa19.05■□□□□ 0.64
Ccdc171-204ENSMUST00000126429 P2rx7Q9Z1M0 595 aa19.05■□□□□ 0.64
Ccdc171-204ENSMUST00000126429 Col15a1O35206 1367 aa19.05■□□□□ 0.64
Ccdc171-204ENSMUST00000126429 Slit1Q80TR4 1531 aa19.04■□□□□ 0.64
Ccdc171-204ENSMUST00000126429 Ppp2r1aQ76MZ3 589 aa19.03■□□□□ 0.64
Ccdc171-204ENSMUST00000126429 Ptpn23Q6PB44 1692 aa19.02■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Eif4a2P10630 407 aa19.01■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Ppp1r15aP17564 657 aa19.01■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Pak3Q61036 559 aa19.01■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Kcna3P16390 528 aa19■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Apba2P98084 750 aa19■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Ezh2Q61188 746 aaKnown RBP19■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Ppp6r1Q7TSI3 856 aa19■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Fer1l6E0CZ42 1862 aa18.99■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Plekhd1B2RPU2 505 aa18.99■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 PsdQ5DTT2 1024 aa18.99■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 TkfcQ8VC30 578 aa18.99■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Zpr1Q62384 459 aa18.98■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Zranb3Q6NZP1 1069 aa18.98■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Slc12a5Q91V14 1138 aa18.98■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Uhrf1bp1lA2RSJ4 1457 aa18.98■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Eya1P97767 591 aa18.97■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Rsph6aQ8CDR2 708 aa18.97■□□□□ 0.63
Ccdc171-204ENSMUST00000126429 Znf219Q6IQX8 726 aa18.95■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Rab3gap2Q8BMG7 1366 aa18.95■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 En2P09066 324 aa18.94■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Ankrd23Q812A3 306 aa18.94■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 PnisrA2AJT4 805 aaKnown RBP18.93■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Gm10471E9Q1C7 252 aa18.93■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 4930523C07RikE9Q2T4 99 aa18.93■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Magea1O89006 320 aa18.93■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Magea5O89009 320 aa18.93■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Vps33bP59016 617 aa18.93■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Ppp1r37Q8BKR5 712 aa18.93■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Magea2Q9R2A2 320 aa18.93■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 FocadA2AKG8 1798 aa18.92■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 MpripP97434 1024 aa18.92■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Mast2Q60592 1734 aa18.91■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Cc2d1aQ8K1A6 943 aa18.91■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Kdm6aO70546 1401 aa18.9■□□□□ 0.62
Ccdc171-204ENSMUST00000126429 Simc1E9Q6E9 1354 aa18.89■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Sik1Q60670 779 aa18.89■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Rapgefl1Q68EF8 662 aa18.89■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Ginm1Q91WR6 327 aa18.89■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Q7TT23 1179 aa18.88■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Nlrp6Q91WS2 869 aa18.88■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Akap11E9Q777 1895 aa18.88■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Mst1rQ62190 1378 aa18.87■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 GakQ99KY4 1305 aa18.87■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Kcnh4A2A5F7 1018 aa18.87■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Ddb1Q3U1J4 1140 aaKnown RBP18.87■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Fam50bQ9WTJ8 334 aa18.87■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Parp14Q2EMV9 1817 aa18.86■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Exoc5Q3TPX4 708 aa18.86■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Wwc2Q6NXJ0 1187 aa18.86■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 ThemisQ8BGW0 636 aa18.86■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Gpr150Q8BL07 427 aa18.86■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 PalmQ9Z0P4 383 aa18.86■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Rpgrip1lQ8CG73 1264 aa18.85■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Aplp2Q06335 707 aa18.84■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Adgrb1Q3UHD1 1582 aa18.83■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Tsen2Q6P7W5 460 aa18.83■□□□□ 0.61
Ccdc171-204ENSMUST00000126429 Mcm10Q0VBD2 885 aa18.82■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 GsdmaQ9EST1 446 aa18.82■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Nwd2Q6P5U7 1742 aa18.82■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Plin1Q8CGN5 517 aa18.81■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Exoc6Q8R313 802 aa18.81■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Anp32bQ9EST5 272 aaKnown RBP18.81■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Kiaa1107Q80TK0 1369 aa18.81■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 GalcP54818 684 aa18.81■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 4930572O03RikQ8C5Y0 211 aa18.81■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Sall2Q9QX96 1004 aa18.81■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Kat6bQ8BRB7 1872 aa18.8■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Lrit1Q8K099 624 aa18.8■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 TnikP83510 1323 aa18.79■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.79■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Gm21680A0A0G2JGR8 267 aa18.79■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Ccdc85cE9Q6B2 420 aa18.79■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Zcrb1Q9CZ96 217 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms