RNA–Protein interactions for RNA: ENSMUST00000089912.11

Casc4-202, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-202ENSMUST00000089912 Filip1lQ6P6L0 1131 aa16.2■□□□□ 0.18
Casc4-202ENSMUST00000089912 Chmp4bQ9D8B3 224 aaKnown RBP16.2■□□□□ 0.18
Casc4-202ENSMUST00000089912 Usp54Q8BL06 1588 aaKnown RBP16.2■□□□□ 0.18
Casc4-202ENSMUST00000089912 F2rP30558 430 aa16.19■□□□□ 0.18
Casc4-202ENSMUST00000089912 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.19■□□□□ 0.18
Casc4-202ENSMUST00000089912 Setd1aE9PYH6 1716 aa16.19■□□□□ 0.18
Casc4-202ENSMUST00000089912 Utp3Q9JI13 469 aaKnown RBP16.19■□□□□ 0.18
Casc4-202ENSMUST00000089912 Pdia3P27773 505 aaKnown RBP16.18■□□□□ 0.18
Casc4-202ENSMUST00000089912 EappQ5BU09 281 aa16.18■□□□□ 0.18
Casc4-202ENSMUST00000089912 Rtf1A2AQ19 715 aaKnown RBP16.18■□□□□ 0.18
Casc4-202ENSMUST00000089912 Kdm5aQ3UXZ9 1690 aa16.18■□□□□ 0.18
Casc4-202ENSMUST00000089912 Fam13aQ8BGI4 693 aa16.18■□□□□ 0.18
Casc4-202ENSMUST00000089912 Ripk4Q9ERK0 786 aa16.18■□□□□ 0.18
Casc4-202ENSMUST00000089912 Txndc2Q6P902 515 aa16.17■□□□□ 0.18
Casc4-202ENSMUST00000089912 Zmym3Q9JLM4 1370 aa16.17■□□□□ 0.18
Casc4-202ENSMUST00000089912 Fam13bQ8K2H3 851 aa16.17■□□□□ 0.18
Casc4-202ENSMUST00000089912 Chd1lQ9CXF7 900 aa16.17■□□□□ 0.18
Casc4-202ENSMUST00000089912 Gm9992B2RWK3 458 aa16.16■□□□□ 0.18
Casc4-202ENSMUST00000089912 MsnP26041 577 aaKnown RBP16.16■□□□□ 0.18
Casc4-202ENSMUST00000089912 Cgnl1Q6AW69 1298 aa16.16■□□□□ 0.18
Casc4-202ENSMUST00000089912 Unc93aQ710D3 458 aa16.16■□□□□ 0.18
Casc4-202ENSMUST00000089912 NexnQ7TPW1 607 aa16.16■□□□□ 0.18
Casc4-202ENSMUST00000089912 Rcan3Q9JKK0 239 aa16.16■□□□□ 0.18
Casc4-202ENSMUST00000089912 Kif4P33174 1231 aa16.16■□□□□ 0.18
Casc4-202ENSMUST00000089912 Usp48Q3V0C5 1052 aa16.16■□□□□ 0.18
Casc4-202ENSMUST00000089912 Ttc21aQ8C0S4 1314 aa16.16■□□□□ 0.18
Casc4-202ENSMUST00000089912 FosbP13346 338 aa16.15■□□□□ 0.18
Casc4-202ENSMUST00000089912 Bcl2l13P59017 434 aa16.15■□□□□ 0.18
Casc4-202ENSMUST00000089912 Prim1P20664 417 aa16.15■□□□□ 0.18
Casc4-202ENSMUST00000089912 Mcm3P25206 812 aaKnown RBP16.15■□□□□ 0.18
Casc4-202ENSMUST00000089912 Gzf1Q4VBD9 706 aa16.15■□□□□ 0.18
Casc4-202ENSMUST00000089912 Mad1l1Q9WTX8 717 aaKnown RBP16.15■□□□□ 0.18
Casc4-202ENSMUST00000089912 Clcn1Q64347 994 aa16.15■□□□□ 0.18
Casc4-202ENSMUST00000089912 Srgap3Q812A2 1099 aa16.15■□□□□ 0.18
Casc4-202ENSMUST00000089912 Nphp4P59240 1425 aa16.14■□□□□ 0.17
Casc4-202ENSMUST00000089912 Myom2Q14BI5 1463 aa16.14■□□□□ 0.17
Casc4-202ENSMUST00000089912 Cwc27Q3TKY6 469 aa16.14■□□□□ 0.17
Casc4-202ENSMUST00000089912 Cep170Q6A065 1588 aa16.14■□□□□ 0.17
Casc4-202ENSMUST00000089912 FanciQ8K368 1330 aa16.14■□□□□ 0.17
Casc4-202ENSMUST00000089912 Pof1bQ8K4L4 587 aa16.14■□□□□ 0.17
Casc4-202ENSMUST00000089912 MccE9PWI3 1003 aa16.14■□□□□ 0.17
Casc4-202ENSMUST00000089912 Sv2bQ8BG39 683 aa16.14■□□□□ 0.17
Casc4-202ENSMUST00000089912 Erc2Q6PH08 957 aa16.13■□□□□ 0.17
Casc4-202ENSMUST00000089912 Samm50Q8BGH2 469 aa16.13■□□□□ 0.17
Casc4-202ENSMUST00000089912 CrebrfQ8CDG5 640 aaKnown RBP16.13■□□□□ 0.17
Casc4-202ENSMUST00000089912 Rab11fip3Q8CHD8 1047 aa16.13■□□□□ 0.17
Casc4-202ENSMUST00000089912 LifrP42703 1092 aa16.13■□□□□ 0.17
Casc4-202ENSMUST00000089912 Psme1P97371 249 aa16.13■□□□□ 0.17
Casc4-202ENSMUST00000089912 Ppp6r3Q922D4 844 aa16.13■□□□□ 0.17
Casc4-202ENSMUST00000089912 Tubgcp6G5E8P0 1769 aa16.12■□□□□ 0.17
Casc4-202ENSMUST00000089912 St18Q80TY4 1045 aa16.12■□□□□ 0.17
Casc4-202ENSMUST00000089912 EvcP57680 1005 aa16.12■□□□□ 0.17
Casc4-202ENSMUST00000089912 Map3k13Q1HKZ5 959 aa16.12■□□□□ 0.17
Casc4-202ENSMUST00000089912 Frmd3Q8BHD4 595 aa16.12■□□□□ 0.17
Casc4-202ENSMUST00000089912 Cabp4Q8VHC5 271 aa16.12■□□□□ 0.17
Casc4-202ENSMUST00000089912 Fam83gQ5SWY7 812 aa16.12■□□□□ 0.17
Casc4-202ENSMUST00000089912 Isy1Q69ZQ2 285 aaKnown RBP16.12■□□□□ 0.17
Casc4-202ENSMUST00000089912 Afap1Q80YS6 731 aa16.12■□□□□ 0.17
Casc4-202ENSMUST00000089912 Clasp1Q80TV8 1535 aaKnown RBP16.11■□□□□ 0.17
Casc4-202ENSMUST00000089912 Nucb1Q02819 459 aaKnown RBP16.11■□□□□ 0.17
Casc4-202ENSMUST00000089912 Kif1bQ60575 1816 aaKnown RBP16.11■□□□□ 0.17
Casc4-202ENSMUST00000089912 Ppfia3P60469 1194 aa16.11■□□□□ 0.17
Casc4-202ENSMUST00000089912 Wwc1Q5SXA9 1104 aa16.11■□□□□ 0.17
Casc4-202ENSMUST00000089912 Tex2Q6ZPJ0 1128 aaKnown RBP16.11■□□□□ 0.17
Casc4-202ENSMUST00000089912 Hs1bp3Q3TC93 395 aa16.1■□□□□ 0.17
Casc4-202ENSMUST00000089912 Zbtb45Q52KG4 520 aa16.1■□□□□ 0.17
Casc4-202ENSMUST00000089912 Gys2Q8VCB3 704 aa16.1■□□□□ 0.17
Casc4-202ENSMUST00000089912 Cyp27a1Q9DBG1 533 aa16.1■□□□□ 0.17
Casc4-202ENSMUST00000089912 Fez1Q8K0X8 392 aa16.1■□□□□ 0.17
Casc4-202ENSMUST00000089912 Cbx1P83917 185 aaKnown RBP16.09■□□□□ 0.17
Casc4-202ENSMUST00000089912 Kiaa0754Q69ZZ9 979 aa16.09■□□□□ 0.17
Casc4-202ENSMUST00000089912 Zkscan16A2ALW2 728 aa16.09■□□□□ 0.17
Casc4-202ENSMUST00000089912 Ptpdc1Q6NZK8 747 aa16.09■□□□□ 0.17
Casc4-202ENSMUST00000089912 Lrrc7Q80TE7 1490 aa16.08■□□□□ 0.17
Casc4-202ENSMUST00000089912 InsrP15208 1372 aa16.08■□□□□ 0.17
Casc4-202ENSMUST00000089912 Tceanc2Q8R2M0 207 aa16.08■□□□□ 0.16
Casc4-202ENSMUST00000089912 Gcc1Q9D4H2 778 aa16.08■□□□□ 0.16
Casc4-202ENSMUST00000089912 TimelessQ9R1X4 1197 aa16.08■□□□□ 0.16
Casc4-202ENSMUST00000089912 Gprasp1Q5U4C1 1347 aa16.08■□□□□ 0.16
Casc4-202ENSMUST00000089912 Zscan25B2RX31 543 aa16.08■□□□□ 0.16
Casc4-202ENSMUST00000089912 Ppp1r42Q8R1Z4 357 aa16.08■□□□□ 0.16
Casc4-202ENSMUST00000089912 CenppQ9CZ92 286 aa16.08■□□□□ 0.16
Casc4-202ENSMUST00000089912 Gse1Q3U3C9 1213 aa16.07■□□□□ 0.16
Casc4-202ENSMUST00000089912 Ciz1Q8VEH2 845 aa16.07■□□□□ 0.16
Casc4-202ENSMUST00000089912 Atg4a-psA0A0G2JFS9 396 aa16.07■□□□□ 0.16
Casc4-202ENSMUST00000089912 TmpoQ61033 693 aaKnown RBP16.07■□□□□ 0.16
Casc4-202ENSMUST00000089912 Atg4aQ8C9S8 396 aa16.07■□□□□ 0.16
Casc4-202ENSMUST00000089912 Sf3a1Q8K4Z5 791 aaKnown RBP16.06■□□□□ 0.16
Casc4-202ENSMUST00000089912 Dhx30Q99PU8 1217 aaKnown RBP16.06■□□□□ 0.16
Casc4-202ENSMUST00000089912 Nphp1Q9QY53 687 aa16.06■□□□□ 0.16
Casc4-202ENSMUST00000089912 ImpactO55091 318 aa16.06■□□□□ 0.16
Casc4-202ENSMUST00000089912 Kdm4cQ8VCD7 1054 aa16.05■□□□□ 0.16
Casc4-202ENSMUST00000089912 Fmnl2A2APV2 1086 aa16.05■□□□□ 0.16
Casc4-202ENSMUST00000089912 Cavin1O54724 392 aa16.05■□□□□ 0.16
Casc4-202ENSMUST00000089912 Mknk2Q8CDB0 459 aa16.05■□□□□ 0.16
Casc4-202ENSMUST00000089912 Tomm22Q9CPQ3 142 aa16.05■□□□□ 0.16
Casc4-202ENSMUST00000089912 Rusc2Q80U22 1514 aa16.04■□□□□ 0.16
Casc4-202ENSMUST00000089912 Zdhhc9P59268 364 aa16.04■□□□□ 0.16
Casc4-202ENSMUST00000089912 Slx4ipQ9D7Y9 413 aa16.04■□□□□ 0.16
Casc4-202ENSMUST00000089912 Gm32742A0A1B0GT42 1604 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms