RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 MvpQ9EQK5 861 aa11.63□□□□□ -0.55
Syne1-201ENSMUST00000041639 Pmfbp1Q9WVQ0 1022 aa11.63□□□□□ -0.55
Syne1-201ENSMUST00000041639 Nup88Q8CEC0 753 aaKnown RBP11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 Evi5lH3BKQ3 813 aa11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 Ccdc102aQ3TMW1 549 aa11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 ItpripQ3TNL8 555 aa11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 Ptpdc1Q6NZK8 747 aa11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 Ttc19Q8CC21 365 aa11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 Eif3aP23116 1344 aaKnown RBP11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 CenphQ9QYM8 241 aa11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 PrxO55103 1391 aa11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 Prl7d1P04769 244 aa11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 Larp1Q6ZQ58 1072 aaKnown RBP11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 Med4Q9CQA5 270 aa11.62□□□□□ -0.55
Syne1-201ENSMUST00000041639 Trim30cD3YVI9 513 aa11.61□□□□□ -0.55
Syne1-201ENSMUST00000041639 Themis2Q91YX0 663 aa11.61□□□□□ -0.55
Syne1-201ENSMUST00000041639 Nat10Q8K224 1024 aaKnown RBP11.61□□□□□ -0.55
Syne1-201ENSMUST00000041639 Ccar2Q8VDP4 922 aaKnown RBP11.61□□□□□ -0.55
Syne1-201ENSMUST00000041639 Abcd1P48410 736 aa11.61□□□□□ -0.55
Syne1-201ENSMUST00000041639 Smarca5Q91ZW3 1051 aaKnown RBP11.61□□□□□ -0.55
Syne1-201ENSMUST00000041639 Irgm2A0A140LIF8 407 aa11.61□□□□□ -0.55
Syne1-201ENSMUST00000041639 Pdia4P08003 638 aaKnown RBP11.61□□□□□ -0.55
Syne1-201ENSMUST00000041639 Gigyf1Q99MR1 1044 aaKnown RBP11.61□□□□□ -0.55
Syne1-201ENSMUST00000041639 Def6Q8C2K1 630 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Rhot2Q8JZN7 620 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Erc1Q99MI1 1120 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Spty2d1Q68FG3 682 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Pof1bQ8K4L4 587 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Gm7298A0A0N4SVU1 1476 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Gm21698A0A087WQP8 267 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Gm21671G3UY31 267 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Ift57Q8BXG3 429 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Cfap58B2RW38 873 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Atxn3Q9CVD2 355 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Duox2A2AQ99 1517 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 Fchsd2Q3USJ8 740 aa11.6□□□□□ -0.55
Syne1-201ENSMUST00000041639 IkQ9Z1M8 557 aaKnown RBP11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Urb2E9Q7L1 1524 aaKnown RBP11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 TmpoQ61033 693 aaKnown RBP11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Afap1Q80YS6 731 aa11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Gnl2Q99LH1 728 aaKnown RBP11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Stim1P70302 685 aa11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Fsd2Q8BZ52 692 aa11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Speer4bQ9D9F7 267 aa11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Cdc45Q9Z1X9 566 aa11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Pms1Q8K119 917 aa11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Sf3b2Q3UJB0 878 aaKnown RBP11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Ppp6r1Q7TSI3 856 aa11.59□□□□□ -0.55
Syne1-201ENSMUST00000041639 Gm21663A0A0G2JE01 267 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Gm7361D3Z6R1 267 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 5031410I06RikE9Q4E0 267 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Gm1979E9QAN3 267 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Gm5862K7N5V5 267 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Gm10220K7N660 267 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Pip4k2aO70172 405 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Ell2Q3UKU1 639 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Btbd11Q6GQW0 1109 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Brf1Q8CFK2 676 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Gas2l3Q3UWW6 683 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Fam13aQ8BGI4 693 aa11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Ddx54Q8K4L0 874 aaKnown RBP11.58□□□□□ -0.56
Syne1-201ENSMUST00000041639 Kif20aP97329 887 aa11.57□□□□□ -0.56
Syne1-201ENSMUST00000041639 Dhx8A2A4P0 1244 aaKnown RBP11.57□□□□□ -0.56
Syne1-201ENSMUST00000041639 Fam184aE9PW83 1143 aa11.57□□□□□ -0.56
Syne1-201ENSMUST00000041639 Trim25Q61510 634 aaKnown RBP11.57□□□□□ -0.56
Syne1-201ENSMUST00000041639 Phldb2Q8K1N2 1249 aa11.57□□□□□ -0.56
Syne1-201ENSMUST00000041639 Gm21680A0A0G2JGR8 267 aa11.57□□□□□ -0.56
Syne1-201ENSMUST00000041639 Zscan20B2KFW1 1030 aa11.57□□□□□ -0.56
Syne1-201ENSMUST00000041639 Slu7Q8BHJ9 585 aa11.57□□□□□ -0.56
Syne1-201ENSMUST00000041639 CenpqQ9CPQ5 267 aa11.57□□□□□ -0.56
Syne1-201ENSMUST00000041639 HnrnpmQ9D0E1 729 aaKnown RBP11.56□□□□□ -0.56
Syne1-201ENSMUST00000041639 Trim34bJ3QNR8 485 aa11.56□□□□□ -0.56
Syne1-201ENSMUST00000041639 Gsdma2Q32M21 443 aa11.56□□□□□ -0.56
Syne1-201ENSMUST00000041639 Rufy2Q8R4C2 606 aa11.56□□□□□ -0.56
Syne1-201ENSMUST00000041639 Krt84Q99M73 603 aa11.56□□□□□ -0.56
Syne1-201ENSMUST00000041639 Luc7lQ9CYI4 371 aaKnown RBP11.56□□□□□ -0.56
Syne1-201ENSMUST00000041639 Mcm4P49717 862 aa11.56□□□□□ -0.56
Syne1-201ENSMUST00000041639 Erlin2Q8BFZ9 340 aa11.56□□□□□ -0.56
Syne1-201ENSMUST00000041639 Slc26a8Q8R0C3 999 aa11.56□□□□□ -0.56
Syne1-201ENSMUST00000041639 Mcm3P25206 812 aaKnown RBP11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 Smc5Q8CG46 1101 aaKnown RBP11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 Otud6bQ8K2H2 294 aa11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 TkfcQ8VC30 578 aa11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 Tiam1Q60610 1591 aa11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 NrkQ9R0G8 1455 aa11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 Gimap6Q8K349 305 aa11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 Aldh1l1Q8R0Y6 902 aa11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 IbtkQ6ZPR6 1352 aaKnown RBP11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 Cyp26c1B2RXA7 518 aa11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 Cdkl5Q3UTQ8 938 aa11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 Iqca1Q9CUL5 857 aa11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 Zbtb22Q9Z0G7 638 aa11.55□□□□□ -0.56
Syne1-201ENSMUST00000041639 Prkar2bP31324 416 aa11.54□□□□□ -0.56
Syne1-201ENSMUST00000041639 Gjb2Q00977 226 aa11.54□□□□□ -0.56
Syne1-201ENSMUST00000041639 Ccdc181Q80ZU5 509 aa11.54□□□□□ -0.56
Syne1-201ENSMUST00000041639 Ssr1Q9CY50 286 aaKnown RBP11.54□□□□□ -0.56
Syne1-201ENSMUST00000041639 Mrvi1Q9WUX5 899 aaKnown RBP11.54□□□□□ -0.56
Syne1-201ENSMUST00000041639 Il16O54824 1322 aa11.54□□□□□ -0.56
Syne1-201ENSMUST00000041639 Spag5Q7TME2 1165 aa11.54□□□□□ -0.56
Syne1-201ENSMUST00000041639 Plekhm2Q80TQ5 1018 aa11.54□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 150.3 ms