RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 MFSD10Q14728 455 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 GPR107Q5VW38 600 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 PTGR2Q8N8N7 351 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-218ENST00000635120 S100ZQ8WXG8 99 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 OSBPL11Q9BXB4 747 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 UNC5CO95185 931 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 MLYCDO95822 493 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 IL12AP29459 219 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 MYBPC1Q00872 1141 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 SPDYCQ5MJ68 293 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 PTGFRNQ9P2B2 879 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 PCYOX1Q9UHG3 505 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 PACSIN3Q9UKS6 424 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 RGSL1A5PLK6 1076 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 ERN1O75460 977 aaKnown RBP9.17□□□□□ -0.94
CSMD1-218ENST00000635120 LCA5LO95447 670 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 NOL9Q5SY16 702 aaKnown RBP9.17□□□□□ -0.94
CSMD1-218ENST00000635120 FNDC11Q9BVV2 318 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 MAT2BQ9NZL9 334 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 ZNHIT2Q9UHR6 403 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 PSME2Q9UL46 239 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 KIDINS220Q9ULH0 1771 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 NCANO14594 1321 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 SIGLEC16A6NMB1 481 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 MCIDASD6RGH6 385 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 OR10H3O60404 316 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 TRUB2O95900 331 aaKnown RBP9.17□□□□□ -0.94
CSMD1-218ENST00000635120 NR2F1P10589 423 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 MTTPP55157 894 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 SMIM11AP58511 58 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 PREPLQ4J6C6 727 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-218ENST00000635120 RNF43Q68DV7 783 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 FAM171BQ6P995 826 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 SCIMPQ6UWF3 145 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 PAGE2Q7Z2X7 111 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 OR4A15Q8NGL6 344 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 ABCG8Q9H221 673 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 AP5Z1O43299 807 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 TSPAN8P19075 237 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 RPL9P32969 192 aaKnown RBP9.17□□□□□ -0.94
CSMD1-218ENST00000635120 CCNHP51946 323 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-218ENST00000635120 LIPMQ5VYY2 423 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 PACS1Q6VY07 963 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 RERGQ96A58 199 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-218ENST00000635120 ING3Q9NXR8 418 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 C3orf18Q9UK00 162 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 KPNA5O15131 536 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 ULK1O75385 1050 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 IFNA16P05015 189 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 CYP1A2P05177 515 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 NELFEP18615 380 aaKnown RBP9.17□□□□□ -0.94
CSMD1-218ENST00000635120 THOP1P52888 689 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 XKR6Q5GH73 641 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 CNSTQ6PJW8 725 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 DNERQ8NFT8 737 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 VAT1Q99536 393 aa9.17□□□□□ -0.94
CSMD1-218ENST00000635120 LOC110117498-PIK3R3F6TDL0 507 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 TP73O15350 636 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 XYLBO75191 536 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 ALDH2P05091 517 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 SLC27A1Q6PCB7 646 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 AFTPHQ6ULP2 937 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 ATL1Q8WXF7 558 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 CERS2Q96G23 380 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 PRMT6Q96LA8 375 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-218ENST00000635120 RTFDC1Q9BY42 306 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-218ENST00000635120 HOXB8P17481 243 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-218ENST00000635120 SLC6A2P23975 617 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 MARCKSL1P49006 195 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 ALG11Q2TAA5 492 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 BHLHB9Q6PI77 547 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 CCDC162PA2VCL2 907 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 TGFB3P10600 412 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 CD101Q93033 1021 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 SLC35C1Q96A29 364 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 WDR12Q9GZL7 423 aaKnown RBP9.16□□□□□ -0.94
CSMD1-218ENST00000635120 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.16□□□□□ -0.94
CSMD1-218ENST00000635120 C1orf167Q5SNV9 1468 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 KRT33AO76009 404 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 OMPP47874 163 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 AKR1D1P51857 326 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 PTPN5P54829 565 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 TTC23Q5W5X9 447 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 PTCD3Q96EY7 689 aaKnown RBP9.16□□□□□ -0.94
CSMD1-218ENST00000635120 ZBTB45Q96K62 511 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-218ENST00000635120 LRMDAQ9H2I8 198 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 CLK4Q9HAZ1 481 aaKnown RBP9.16□□□□□ -0.94
CSMD1-218ENST00000635120 CABIN1Q9Y6J0 2220 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 LIASO43766 372 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 CCNYL3P0C7X3 344 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 HNRNPLP14866 589 aaKnown RBP eCLIP9.16□□□□□ -0.942e-7■■■■□ 19.3
CSMD1-218ENST00000635120 ITGA2P17301 1181 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 ABL2P42684 1182 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 RARRES1P49788 294 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 IRF8Q02556 426 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 NTRK3Q16288 839 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 ZC3H12AQ5D1E8 599 aaKnown RBP9.16□□□□□ -0.94
CSMD1-218ENST00000635120 PGBD2Q6P3X8 592 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 RNF19BQ6ZMZ0 732 aa9.16□□□□□ -0.94
CSMD1-218ENST00000635120 ARCQ7LC44 396 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms