RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 SHFQ7M4L6 423 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 ZC3HC1Q86WB0 502 aaKnown RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 FSIP1Q8NA03 581 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 STT3BQ8TCJ2 826 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 HMGB4Q8WW32 186 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 MCRS1Q96EZ8 462 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 EGFL8Q99944 293 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 TRIM51Q9BSJ1 452 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 RTKNQ9BST9 563 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 NPFFR1Q9GZQ6 430 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 ATP8A2Q9NTI2 1148 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 IFT80Q9P2H3 777 aaPredicted RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 PCDHGB5Q9Y5G0 923 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 MID1O15344 667 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 SSTR2P30874 369 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 STX2P32856 288 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 TTKP33981 857 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 LMO4P61968 165 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 ZNF876PQ49A33 203 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 CCDC181Q5TID7 509 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 GJB7Q6PEY0 223 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 EPHX4Q8IUS5 362 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 AMER3Q8N944 861 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 CPT1BQ92523 772 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 MECRQ9BV79 373 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 TRIM31Q9BZY9 425 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 UPB1Q9UBR1 384 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 KLQ9UEF7 1012 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 BAG5Q9UL15 447 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 PCDHGB6Q9Y5F9 930 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 PCDHA10Q9Y5I2 948 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 KRTAP16-1A8MUX0 517 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 SYN3O14994 580 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 PRKNO60260 465 aaPredicted RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 CAVIN2O95810 425 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 SERPINC1P01008 464 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 IL1AP01583 271 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 IGHV4-39P01824 125 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 S100BP04271 92 aaPredicted RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 AVPR2P30518 371 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 FUT6P51993 359 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 MVDP53602 400 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 KRTAP10-8P60410 259 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 TNFAIP2Q03169 654 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 FAM209BQ5JX69 171 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 BSPRYQ5W0U4 402 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 DGAT2L7PQ6IED9 249 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 LCTLQ6UWM7 567 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 SLC44A2Q8IWA5 706 aaPredicted RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 MB21D2Q8IYB1 491 aaPredicted RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 WDR20Q8TBZ3 569 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 MYD88Q99836 296 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 SARGQ9BW04 601 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 NPLQ9BXD5 320 aaPredicted RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 PLEKHA4Q9H4M7 779 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 PTPRHQ9HD43 1115 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 WDR6Q9NNW5 1121 aaKnown RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 NDRG3Q9UGV2 375 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 RP1L1Q8IWN7 2480 aaPredicted RBP1.3□□□□□ -2.2
CEP290-208ENST00000604024 DDTLA6NHG4 134 aaPredicted RBP1.3□□□□□ -2.2
CEP290-208ENST00000604024 C17orf100A8MU93 164 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 DNPH1O43598 174 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 KRT38O76015 456 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 KDM4BO94953 1096 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 FGF5P12034 268 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 TRIM27P14373 513 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 MARK3P27448 753 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 HOXC8P31273 242 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 HNRNPH1P31943 449 aaKnown RBP1.3□□□□□ -2.2
CEP290-208ENST00000604024 PNPLA4P41247 253 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 TECP42680 631 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 NLRP5P59047 1200 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 GOLGA8FQ08AF8 430 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 PMS2P11Q13670 270 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 CCDC105Q8IYK2 499 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 SCAIQ8N9R8 606 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 SPATA20Q8TB22 786 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 CREB3L4Q8TEY5 395 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 C2CD4CQ8TF44 421 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 ZNF524Q96C55 264 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 TRIM15Q9C019 465 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 SCRT2Q9NQ03 307 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 ENTPD7Q9NQZ7 604 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 THAP1Q9NVV9 213 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 BEX4Q9NWD9 120 aaPredicted RBP1.3□□□□□ -2.2
CEP290-208ENST00000604024 GEMIN8Q9NWZ8 242 aaKnown RBP1.3□□□□□ -2.2
CEP290-208ENST00000604024 AGAP5A6NIR3 686 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 A8MU10 97 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 DHX16O60231 1041 aaKnown RBP1.3□□□□□ -2.2
CEP290-208ENST00000604024 CHN1P15882 459 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 MTNR1AP48039 350 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 PRIM2P49643 509 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 IRX6P78412 446 aaPredicted RBP1.3□□□□□ -2.2
CEP290-208ENST00000604024 SLC18A2Q05940 514 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 SATL1Q86VE3 508 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 HERC6Q8IVU3 1022 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 APLFQ8IW19 511 aaPredicted RBP1.3□□□□□ -2.2
CEP290-208ENST00000604024 ZNF248Q8NDW4 579 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 DEPTORQ8TB45 409 aa1.3□□□□□ -2.2
CEP290-208ENST00000604024 RIPOR3Q96MK2 946 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms