RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 IHHQ14623 411 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 PAFAH1B3Q15102 231 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 CST6Q15828 149 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 CCDC6Q16204 474 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 TAZQ16635 292 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 HADHQ16836 314 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 SPRED3Q2MJR0 410 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 PARP15Q460N3 678 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 PLK5Q496M5 336 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 NPNTQ6UXI9 565 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 DPY19L3Q6ZPD9 716 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 PRR23BQ6ZRT6 265 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 B4GALNT4Q76KP1 1039 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 DAAM2Q86T65 1068 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 KIAA1328Q86T90 577 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 SLC41A1Q8IVJ1 513 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 RHOT1Q8IXI2 618 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 TMEFF1Q8IYR6 380 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 PLD5Q8N7P1 536 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 KCTD6Q8NC69 237 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 ALG3Q92685 438 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 ARRDC3Q96B67 414 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 SIPA1Q96FS4 1042 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 RNF157Q96PX1 679 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 ZNF670Q9BS34 389 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 SMOC1Q9H4F8 434 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 RETREG1Q9H6L5 497 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 ITM2CQ9NQX7 267 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 LHX3Q9UBR4 397 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 PPM1HQ9ULR3 514 aa9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 PACSIN2Q9UNF0 486 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-219ENST00000576713 PLXND1Q9Y4D7 1925 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 A0A096LPE4 126 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 TMEM238LA0A1B0GVL6 79 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 A0A1W2PPZ6 126 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 C10orf142B7Z368 130 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 MCF2LO15068 1137 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 ARHGAP6O43182 974 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 PALMO75781 387 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 FTCDO95954 541 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 IGLV3-19P01714 112 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 PECAM1P16284 738 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 SLC8A1P32418 973 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 ETFBP38117 255 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 CDKN2BP42772 138 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 SLC1A1P43005 524 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 PEX5P50542 639 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 SNRPNP63162 240 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 SLC10A7Q0GE19 358 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 ELAVL3Q14576 367 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 PDK2Q15119 407 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 LRRC38Q5VT99 294 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 DCAF12L1Q5VU92 463 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 PMS2CLQ68D20 193 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 ZNF776Q68DI1 518 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 RETSATQ6NUM9 610 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 TMCO3Q6UWJ1 677 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 ARMCX6Q7L4S7 300 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 NT5DC3Q86UY8 548 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 ZNF354CQ86Y25 554 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 CACTIN-AS1Q8N1I8 211 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 PGBD5Q8N414 524 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 GRIN3AQ8TCU5 1115 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 PRCCQ92733 491 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 FAM131CQ96AQ9 280 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 TOE1Q96GM8 510 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 ZC3H10Q96K80 434 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 PABPC3Q9H361 631 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 PARD6AQ9NPB6 346 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 WSB2Q9NYS7 404 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 DTLQ9NZJ0 730 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 RCOR3Q9P2K3 495 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 SAE1Q9UBE0 346 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 SUN2Q9UH99 717 aa9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 TNRC6BQ9UPQ9 1833 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-219ENST00000576713 ATXN2Q99700 1313 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 DDX3YO15523 660 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 PSTPIP1O43586 416 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 IL1BP01584 269 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 NID1P14543 1247 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 TGM1P22735 817 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 CHRNA3P32297 505 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 CNR2P34972 360 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 CTNNA1P35221 906 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 DNA2P51530 1060 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 CCNHP51946 323 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 ZNF135P52742 658 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 TAS2R38P59533 333 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 DYNLT1P63172 113 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 GALNT2Q10471 571 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 KIF5AQ12840 1032 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 CNTN1Q12860 1018 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 USP39Q53GS9 565 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 CARD16Q5EG05 197 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 SLC9A4Q6AI14 798 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 LINC00114Q6XXX2 140 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 SPOCD1Q6ZMY3 1216 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 CEP68Q76N32 757 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 KATNAL2Q8IYT4 538 aa9.6□□□□□ -0.87
NPLOC4-219ENST00000576713 PCDH20Q8N6Y1 951 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms