RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 KCNA4P22459 653 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 SERPINA4P29622 427 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 SCNN1BP51168 640 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 NOVA1P51513 510 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 ATXN3P54252 364 aaPredicted RBP15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 PRKD1Q15139 912 aaPredicted RBP15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 TMEM259Q4ZIN3 620 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 RALGPS1Q5JS13 557 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 TBC1D3GQ6DHY5 549 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 TBC1D3CQ6IPX1 549 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 PSAPL1Q6NUJ1 521 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 NEK5Q6P3R8 708 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 FBXL19Q6PCT2 694 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 CAMK1DQ8IU85 385 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 TBC1D3Q8IZP1 549 aaPredicted RBP15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 CCNYQ8ND76 341 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 SPOCK2Q92563 424 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 HAUS1Q96CS2 278 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 ZNF641Q96N77 438 aaPredicted RBP15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 GTPBP2Q9BX10 602 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 HEMGNQ9BXL5 484 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 OSBPL8Q9BZF1 889 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 POLR1EQ9GZS1 481 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 NOD2Q9HC29 1040 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 GGT7Q9UJ14 662 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 ZFR2Q9UPR6 939 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 ITM2BQ9Y287 266 aa15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 ASCC3Q8N3C0 2202 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-219ENST00000560871 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 UPK3BL1B0FP48 263 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 UPK3BL2E5RIL1 263 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 APOC4-APOC2K7ER74 178 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 HTRA2O43464 458 aaPredicted RBP15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 RNGTTO60942 597 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 SOCS5O75159 536 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 APOC2P02655 101 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 CEACAM1P13688 526 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 TIMP2P16035 220 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 PMLP29590 882 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 BCL2L1Q07817 233 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 ZNF211Q13398 564 aaPredicted RBP15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 IHHQ14623 411 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 NOMO1Q15155 1222 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 LRRC73Q5JTD7 316 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 BZW1Q7L1Q6 419 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 HORMAD1Q86X24 394 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 MINDY1Q8N5J2 469 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 UBL4BQ8N7F7 174 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 CNTD1Q8N815 330 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 P3H4Q92791 437 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 SLC6A18Q96N87 628 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 BRD8Q9H0E9 1235 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 MIR1-1HGQ9H1L0 117 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 TM9SF3Q9HD45 589 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 SCUBE2Q9NQ36 999 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 RBM22Q9NW64 420 aaKnown RBP eCLIP15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 ATP8A1Q9Y2Q0 1164 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 SHROOM3Q8TF72 1996 aa15.64■□□□□ 0.09
RABGGTA-219ENST00000560871 A0A1W2PQU0 124 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 BCAT2O15382 392 aaPredicted RBP15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 ITIH2P19823 946 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 MAT2AP31153 395 aaKnown RBP15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 AP1B1Q10567 949 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 TRAF2Q12933 501 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 UGP2Q16851 508 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 ZNF284Q2VY69 593 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 MEI1Q5TIA1 1274 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 SEL1L3Q68CR1 1132 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 KIAA1161Q6NSJ0 714 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 BRAT1Q6PJG6 821 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 B4GALNT4Q76KP1 1039 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 PIP4P1Q86T03 277 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 OR2I1PQ8NGU4 316 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 ARRDC2Q8TBH0 407 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 UBE2Q2Q8WVN8 375 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 QKIQ96PU8 341 aaKnown RBP eCLIP15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 ALS2CR12Q96Q35 445 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 SEMA3CQ99985 751 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 DNAAF2Q9NVR5 837 aaKnown RBP15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 DMTF1Q9Y222 760 aa15.63■□□□□ 0.09
RABGGTA-219ENST00000560871 TP53BP1Q12888 1972 aaPredicted RBP15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 WNT9AO14904 365 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 TSPAN6O43657 245 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 FZD6O60353 706 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 OPHN1O60890 802 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 JCHAINP01591 159 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 PTMAP06454 111 aaKnown RBP15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 NUDT1P36639 197 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 GRIA4P48058 902 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 SUOXP51687 545 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 RACK1P63244 317 aaKnown RBP15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 OTUD4Q01804 1114 aaKnown RBP15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 BNC1Q01954 994 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 DSC2Q02487 901 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 NIPAL4Q0D2K0 466 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 KLF1Q13351 362 aaPredicted RBP15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 FAM182AQ5T1J6 154 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 PRPF39Q86UA1 669 aaKnown RBP15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 ZSCAN30Q86W11 494 aa15.62■□□□□ 0.09
RABGGTA-219ENST00000560871 DEFB124Q8NES8 71 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms