RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 TIMP2P16035 220 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 AFF3P51826 1226 aaKnown RBP16.39■□□□□ 0.21
YIF1A-209ENST00000494836 IRX4P78413 519 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 UGP2Q16851 508 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 ALG1LQ6GMV1 187 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 KIAA1161Q6NSJ0 714 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 ECHDC3Q96DC8 303 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 SEMA3CQ99985 751 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 HERPUD2Q9BSE4 406 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 KCNF1Q9H3M0 494 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 EBF2Q9HAK2 575 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 CAPN10Q9HC96 672 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 TM9SF3Q9HD45 589 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 SEPT10Q9P0V9 454 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 DMTF1Q9Y222 760 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 ITM2BQ9Y287 266 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 SLCO1B1Q9Y6L6 691 aa16.39■□□□□ 0.21
YIF1A-209ENST00000494836 PLXNA2O75051 1894 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 TRAFD1O14545 582 aaPredicted RBP16.38■□□□□ 0.21
YIF1A-209ENST00000494836 SPINT1O43278 529 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 TJP3O95049 919 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 CES1P23141 567 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 RPS21P63220 83 aaKnown RBP16.38■□□□□ 0.21
YIF1A-209ENST00000494836 RACK1P63244 317 aaKnown RBP16.38■□□□□ 0.21
YIF1A-209ENST00000494836 ARHGAP8P85298 464 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 ELP6Q0PNE2 266 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 ZBTB17Q13105 803 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 ZNF211Q13398 564 aaPredicted RBP16.38■□□□□ 0.21
YIF1A-209ENST00000494836 PRKD1Q15139 912 aaPredicted RBP16.38■□□□□ 0.21
YIF1A-209ENST00000494836 TEAD4Q15561 434 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 TMEM259Q4ZIN3 620 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 SEL1L3Q68CR1 1132 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 AADACL2Q6P093 401 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 ERAP2Q6P179 960 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 ZC3H18Q86VM9 953 aaKnown RBP16.38■□□□□ 0.21
YIF1A-209ENST00000494836 ZSCAN30Q86W11 494 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.38■□□□□ 0.21
YIF1A-209ENST00000494836 TRIM58Q8NG06 486 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 TFB1MQ8WVM0 346 aaKnown RBP16.38■□□□□ 0.21
YIF1A-209ENST00000494836 FEM1CQ96JP0 617 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 SERAC1Q96JX3 654 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 NSMCE3Q96MG7 304 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 SLC6A18Q96N87 628 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 IL12RB2Q99665 862 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 EDEM2Q9BV94 578 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 GGT7Q9UJ14 662 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 ZFR2Q9UPR6 939 aaKnown RBP16.38■□□□□ 0.21
YIF1A-209ENST00000494836 PCDHGC4Q9Y5F7 938 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 CEP250Q9BV73 2442 aa16.38■□□□□ 0.21
YIF1A-209ENST00000494836 CACNA1EQ15878 2313 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 DMXL1Q9Y485 3027 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 A0A1W2PQ67 120 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 GDF9O60383 454 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 PRLRP16471 622 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 ENGP17813 658 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 GRIA4P48058 902 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 POLR2LP62875 67 aaKnown RBP16.37■□□□□ 0.21
YIF1A-209ENST00000494836 DSC2Q02487 901 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 TRAF2Q12933 501 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 ZNF284Q2VY69 593 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 NAPEPLDQ6IQ20 393 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 B4GALNT4Q76KP1 1039 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 ADAT2Q7Z6V5 191 aaKnown RBP16.37■□□□□ 0.21
YIF1A-209ENST00000494836 ZSWIM9Q86XI8 627 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 PDCD6IPQ8WUM4 868 aaKnown RBP16.37■□□□□ 0.21
YIF1A-209ENST00000494836 KLK6Q92876 244 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 QKIQ96PU8 341 aaKnown RBP eCLIP16.37■□□□□ 0.21
YIF1A-209ENST00000494836 CEP41Q9BYV8 373 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 PCDH12Q9NPG4 1184 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 FSCN3Q9NQT6 498 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 AASDHPPTQ9NRN7 309 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 RXFP3Q9NSD7 469 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 ATP8A1Q9Y2Q0 1164 aa16.37■□□□□ 0.21
YIF1A-209ENST00000494836 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.36■□□□□ 0.21
YIF1A-209ENST00000494836 GOLGA6L9A6NEM1 432 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 HACD1B0YJ81 288 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 PRAMEF26H0Y7S4 382 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 ARHGAP33O14559 1287 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 SLC31A1O15431 190 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 ZSCAN12O43309 604 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 MTSS1O43312 755 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 HTRA2O43464 458 aaPredicted RBP16.36■□□□□ 0.21
YIF1A-209ENST00000494836 CPP00450 1065 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 SYPP08247 313 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 CSNK1EP49674 416 aaKnown RBP16.36■□□□□ 0.21
YIF1A-209ENST00000494836 ATXN3P54252 364 aaPredicted RBP16.36■□□□□ 0.21
YIF1A-209ENST00000494836 OTUD4Q01804 1114 aaKnown RBP16.36■□□□□ 0.21
YIF1A-209ENST00000494836 GRIK2Q13002 908 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 XRCC4Q13426 336 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 NOMO1Q15155 1222 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 RPS6KA1Q15418 735 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 SLC45A4Q5BKX6 768 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 MEI1Q5TIA1 1274 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 CNTD1Q8N815 330 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 ARRDC2Q8TBH0 407 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 ACTL9Q8TC94 416 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 NETO1Q8TDF5 533 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 CXorf40AQ8TE69 158 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 SPOCK2Q92563 424 aa16.36■□□□□ 0.21
YIF1A-209ENST00000494836 AGAP3Q96P47 875 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms