RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 LSMEM2Q8N112 164 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 AOPEPQ8N6M6 819 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 ARFGAP1Q8N6T3 406 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 HCAR2Q8TDS4 363 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 TSACCQ96A04 125 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-210ENST00000469897 VCPIP1Q96JH7 1222 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 ZNF578Q96N58 590 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-210ENST00000469897 FCRL3Q96P31 734 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-210ENST00000469897 UBL7Q96S82 380 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-210ENST00000469897 LRRC61Q9BV99 259 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 BOCQ9BWV1 1114 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 DHX35Q9H5Z1 703 aaKnown RBP13.41□□□□□ -0.26
CPSF4-210ENST00000469897 LRRC19Q9H756 370 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 POLR1BQ9H9Y6 1135 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 PCDH12Q9NPG4 1184 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 PARVAQ9NVD7 372 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 GULP1Q9UBP9 304 aa13.41□□□□□ -0.26
CPSF4-210ENST00000469897 TMEM191CA6NGB0 347 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 LMO7DNF2Z398 122 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 RIOK3O14730 519 aaKnown RBP13.4□□□□□ -0.26
CPSF4-210ENST00000469897 ATMINO43313 823 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-210ENST00000469897 PRAMEF11O60813 436 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 PRB1P04280 392 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 CELA2BP08218 269 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-210ENST00000469897 DESP17661 470 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 RGRP47804 291 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 RPIAP49247 311 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 LIG3P49916 1009 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 SUOXP51687 545 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 NDST2P52849 883 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 ELP6Q0PNE2 266 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 IRF4Q15306 451 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 TCEA2Q15560 299 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 ERMARDQ5T6L9 678 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 PLEKHA7Q6IQ23 1121 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 MACC1Q6ZN28 852 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 HID1Q8IV36 788 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 SLC35F3Q8IY50 421 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 TSEN2Q8NCE0 465 aaKnown RBP13.4□□□□□ -0.26
CPSF4-210ENST00000469897 ZNF248Q8NDW4 579 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 GLMNQ92990 594 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 ATXN7L3BQ96GX2 97 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 ZNF641Q96N77 438 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-210ENST00000469897 LGMNQ99538 433 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 SYT11Q9BT88 431 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 APOOQ9BUR5 198 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 TRIM7Q9C029 511 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 PDFQ9HBH1 243 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
CPSF4-210ENST00000469897 PADI4Q9UM07 663 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 AP4E1Q9UPM8 1137 aa13.4□□□□□ -0.26
CPSF4-210ENST00000469897 A0A1W2PNU3 283 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-210ENST00000469897 LRRC53A6NM62 1247 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 TMEM110-MUSTN1A8MSY1 372 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 EEF2KO00418 725 aaKnown RBP13.39□□□□□ -0.27
CPSF4-210ENST00000469897 TOR1BO14657 336 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 LZTS3O60299 673 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-210ENST00000469897 PALMO75781 387 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 FTLP02792 175 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-210ENST00000469897 C6P13671 934 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 CTSEP14091 401 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 ERCC2P18074 760 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 PEX5P50542 639 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 HK3P52790 923 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 CXADRP78310 365 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 TYRO3Q06418 890 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 ALG11Q2TAA5 492 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 C6orf132Q5T0Z8 1188 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 CFAP58Q5T655 872 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 ESRP1Q6NXG1 681 aaKnown RBP13.39□□□□□ -0.27
CPSF4-210ENST00000469897 ERAP2Q6P179 960 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 FOXR1Q6PIV2 292 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 GPR155Q7Z3F1 870 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 SRLQ86TD4 932 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 ZSWIM9Q86XI8 627 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 TPCN2Q8NHX9 752 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 SLC39A7Q92504 469 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 HIC2Q96JB3 615 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 PEBP4Q96S96 227 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 KCTD15Q96SI1 283 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-210ENST00000469897 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 DONSONQ9NYP3 566 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 SIRPGQ9P1W8 387 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 DOLKQ9UPQ8 538 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 SATB2Q9UPW6 733 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 OR1A2Q9Y585 309 aa13.39□□□□□ -0.27
CPSF4-210ENST00000469897 TSPAN11A1L157 253 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 ARHGAP42A6NI28 874 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 A8MX80 341 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 GOLGA6L22H0YM25 854 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 DFFAO00273 331 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 DXOO77932 396 aaKnown RBP13.38□□□□□ -0.27
CPSF4-210ENST00000469897 PCCBP05166 539 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 HTR1BP28222 390 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 RBMS1P29558 406 aaKnown RBP13.38□□□□□ -0.27
CPSF4-210ENST00000469897 MIPP30301 263 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 HTR7P34969 479 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 CSNK1DP48730 415 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 BLKP51451 505 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 PCBP4P57723 403 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms