RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 LINC00523Q86TU6 105 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 CAND1Q86VP6 1230 aaKnown RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 ZCCHC9Q8N567 271 aaKnown RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 LPCAT1Q8NF37 534 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 OR52K1Q8NGK4 314 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 PDCD6IPQ8WUM4 868 aaKnown RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 ECHDC3Q96DC8 303 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 LRIG1Q96JA1 1093 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 UHRF1Q96T88 793 aaPredicted RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 FAM129BQ96TA1 746 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 FMO2Q99518 471 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 OSBPL1AQ9BXW6 950 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 CASS4Q9NQ75 786 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 PIH1D1Q9NWS0 290 aaKnown RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 ARIH1Q9Y4X5 557 aaPredicted RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 F5P12259 2224 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 ZNF106Q9H2Y7 1883 aaKnown RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 UQCRHLA0A096LP55 91 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 A0A1W2PQF6 199 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 FAM170BA6NMN3 283 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 SYNCRIPO60506 623 aaKnown RBP11.94□□□□□ -0.5
RNF13-208ENST00000467996 PPFIA2O75334 1257 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 PGLSO95336 258 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 NDST3O95803 873 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 CPP00450 1065 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 EPOP01588 193 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 PRNPP04156 253 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 FGF1P05230 155 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 UQCRHP07919 91 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 MLNP12872 115 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 HLA-DPA1P20036 260 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 MAGEA3P43357 314 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 TNNT3P45378 269 aaPredicted RBP11.94□□□□□ -0.5
RNF13-208ENST00000467996 ARL4CP56559 192 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 CDH17Q12864 832 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 FZD5Q13467 585 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 STARD3Q14849 445 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 HIF1AQ16665 826 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 SIRPB2Q5JXA9 342 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 EOGTQ5NDL2 527 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 FNBP1LQ5T0N5 605 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 ARMC12Q5T9G4 340 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 DENND5AQ6IQ26 1287 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 ZSWIM9Q86XI8 627 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 SYNPOQ8N3V7 929 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 SLC25A41Q8N5S1 370 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 DNAAF3Q8N9W5 541 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 PJA1Q8NG27 643 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 PIP4K2CQ8TBX8 421 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 ZNF641Q96N77 438 aaPredicted RBP11.94□□□□□ -0.5
RNF13-208ENST00000467996 KLHL32Q96NJ5 620 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 FRMD8Q9BZ67 464 aaPredicted RBP11.94□□□□□ -0.5
RNF13-208ENST00000467996 RSPH9Q9H1X1 276 aaPredicted RBP11.94□□□□□ -0.5
RNF13-208ENST00000467996 SUV39H2Q9H5I1 410 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 LMAN1LQ9HAT1 526 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 ARNT2Q9HBZ2 717 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 XAB2Q9HCS7 855 aaKnown RBP11.94□□□□□ -0.5
RNF13-208ENST00000467996 CD248Q9HCU0 757 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 MTRF1LQ9UGC7 380 aaKnown RBP11.94□□□□□ -0.5
RNF13-208ENST00000467996 PPM1HQ9ULR3 514 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 MMP17Q9ULZ9 603 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 PCDHB9Q9Y5E1 797 aa11.94□□□□□ -0.5
RNF13-208ENST00000467996 LRRK1Q38SD2 2015 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 TSPAN11A1L157 253 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 CHURC1-FNTBB4DL54 471 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 C1QTNF3-AMACRE9PGA6 284 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 AVILO75366 819 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 BANF1O75531 89 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 TUBBP07437 444 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 GRIA4P48058 902 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 PSMD8P48556 350 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 METAP1P53582 386 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 COPAP53621 1224 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 DHX9Q08211 1270 aaKnown RBP11.93□□□□□ -0.5
RNF13-208ENST00000467996 SIGLEC14Q08ET2 396 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 POM121L1PQ3SYA9 428 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 MSS51Q4VC12 460 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 ZNF805Q5CZA5 627 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 CFAP58Q5T655 872 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 DSG4Q86SJ6 1040 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 MMAAQ8IVH4 418 aaKnown RBP11.93□□□□□ -0.5
RNF13-208ENST00000467996 AGGF1Q8N302 714 aaeCLIP11.93□□□□□ -0.5
RNF13-208ENST00000467996 PAF1Q8N7H5 531 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 TMIEQ8NEW7 156 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 OR2T3Q8NH03 318 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 PIH1D2Q8WWB5 315 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.93□□□□□ -0.5
RNF13-208ENST00000467996 SPOCK2Q92563 424 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 EDAQ92838 391 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 NELL2Q99435 816 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 ADGRE3Q9BY15 652 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 FOXP3Q9BZS1 431 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 PHACTR1Q9C0D0 580 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 FBRSQ9HAH7 460 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 SARDHQ9UL12 918 aa11.93□□□□□ -0.5
RNF13-208ENST00000467996 A0A1W2PQ67 120 aa11.92□□□□□ -0.5
RNF13-208ENST00000467996 E7ESA3 106 aa11.92□□□□□ -0.5
RNF13-208ENST00000467996 AP3B1O00203 1094 aa11.92□□□□□ -0.5
RNF13-208ENST00000467996 KPNA3O00505 521 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms