RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GOLGA8NF8WBI6 632 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 AP3B1O00203 1094 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 ZBTB14O43829 449 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 KLHL41O60662 606 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 TRIM13O60858 407 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 RAMP2O60895 175 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 PDHA1P08559 390 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 ATXN1LP0C7T5 689 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 PIRTP0C851 137 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 DNAJB2P25686 324 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 OR1E1P30953 314 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 GRIA4P48058 902 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 RENBPP51606 427 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 RAB10P61026 200 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 POLD3Q15054 466 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 SIRPB2Q5JXA9 342 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 ACBD5Q5T8D3 534 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 LRRC8EQ6NSJ5 796 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 NSMCE3Q96MG7 304 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 OR52B2Q96RD2 323 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 CDH19Q9H159 772 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 ELAC1Q9H777 363 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 MARCH4Q9P2E8 410 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 SLC38A8A6NNN8 435 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 SCAMP3O14828 347 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 ZMPSTE24O75844 475 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 UPP2O95045 317 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 SERPINH1P50454 418 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 SGSHP51688 502 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 THOC5Q13769 683 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 WASHC2DQ5SRD0 308 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 NEPROQ6NW34 567 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 ZYG11AQ6WRX3 759 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 NPAS4Q8IUM7 802 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 TDRD5Q8NAT2 981 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 SPPL2BQ8TCT7 592 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 STYXQ8WUJ0 223 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.31■□□□□ 0.044e-6■■■□□ 15.2
SCAMP4-202ENST00000409472 UNC93B1Q9H1C4 597 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 MRM3Q9HC36 420 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 DNAJC28Q9NX36 388 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 SCOCQ9UIL1 159 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 APOBEC2Q9Y235 224 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 CHD5Q8TDI0 1954 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 DRGXA6NNA5 263 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 DLX3O60479 287 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 ZDHHC11BP0C7U3 371 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 STMN1P16949 149 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 AOC1P19801 751 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 TACR2P21452 398 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 GLDCP23378 1020 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 CPOXP36551 454 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 PGM1P36871 562 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 CD151P48509 253 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 ATN1P54259 1190 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 NAGLUP54802 743 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 SLC25A3Q00325 362 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 SERINC3Q13530 473 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 SLC12A1Q13621 1099 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 GALNT3Q14435 633 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 IRGCQ6NXR0 463 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 PTAR1Q7Z6K3 402 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 TMCO2Q7Z6W1 182 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 LGI2Q8N0V4 545 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 TEX26Q8N6G2 289 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 FAM161BQ96MY7 647 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 SEMA3CQ99985 751 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 TTPALQ9BTX7 342 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 TUBB6Q9BUF5 446 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 PPP1R12CQ9BZL4 782 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 WDR55Q9H6Y2 383 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 NSMCE4AQ9NXX6 385 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 TANC1Q9C0D5 1861 aa15.3■□□□□ 0.04
SCAMP4-202ENST00000409472 A0A1B0GVG6 124 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 TMEM233B4DJY2 109 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 SPECC1L-ADORA2AF8WAN1 911 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 NEMP1O14524 444 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 SORBS2O94875 1100 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 ARSAP15289 507 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 SESN3P58005 492 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 EML3Q32P44 896 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 ARL13AQ5H913 290 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 RPS27LQ71UM5 84 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 DEFB128Q7Z7B8 93 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 LCA5Q86VQ0 697 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 CCDC117Q8IWD4 279 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 LSMEM2Q8N112 164 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 OR7D4Q8NG98 312 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 HEXDCQ8WVB3 486 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 WBP2Q969T9 261 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 SMIM14Q96QK8 99 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 VCX3BQ9H321 246 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 MMADHCQ9H3L0 296 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 ARNT2Q9HBZ2 717 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 VCX3AQ9NNX9 186 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 ACOT9Q9Y305 439 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 PIGNO95427 931 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 COL6A1P12109 1028 aa15.29■□□□□ 0.04
SCAMP4-202ENST00000409472 NCF2P19878 526 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms