RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ERCC5P28715 1186 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-202ENST00000374426 HK3P52790 923 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 CDR2Q01850 454 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 PTP4A2Q12974 167 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 ALG11Q2TAA5 492 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 INO80DQ53TQ3 878 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-202ENST00000374426 NYAP1Q6ZVC0 841 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 B3GNT8Q7Z7M8 397 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 PYROXD2Q8N2H3 581 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 FSTL5Q8N475 847 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-202ENST00000374426 ARL10Q8N8L6 244 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 KYQ8NBH2 561 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 PCDH19Q8TAB3 1148 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 FAM172AQ8WUF8 416 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 CASKIN2Q8WXE0 1202 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 COL26A1Q96A83 441 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 NTAN1Q96AB6 310 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 LIN37Q96GY3 246 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-202ENST00000374426 SYNDIG1Q9H7V2 258 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 GULP1Q9UBP9 304 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 COQ6Q9Y2Z9 468 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 INSIG1O15503 277 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 IGSF6O95976 241 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 EPHB2P29323 1055 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 RFC1P35251 1148 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-202ENST00000374426 KLK7P49862 253 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 PEX5P50542 639 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 BLKP51451 505 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 RHOAP61586 193 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 RAD51Q06609 339 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 LRRC14Q15048 493 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 ELOCQ15369 112 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 TCEA2Q15560 299 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 WSCD2Q2TBF2 565 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 TMEM52BQ4KMG9 183 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 TCP11X2Q5H9J9 407 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 LVRNQ6Q4G3 990 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 CCDC81Q6ZN84 652 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 ZNF354CQ86Y25 554 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 HID1Q8IV36 788 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 RTL3Q8N8U3 475 aaKnown RBP13.93□□□□□ -0.18
CXCL12-202ENST00000374426 TSACCQ96A04 125 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-202ENST00000374426 CCDC74AQ96AQ1 378 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 HMCESQ96FZ2 354 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 MED8Q96G25 268 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 CPEB1Q9BZB8 566 aaKnown RBP13.93□□□□□ -0.18
CXCL12-202ENST00000374426 EDEM3Q9BZQ6 932 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 CLSTN2Q9H4D0 955 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 SIRPGQ9P1W8 387 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 LHX3Q9UBR4 397 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 BSNQ9UPA5 3926 aa13.93□□□□□ -0.18
CXCL12-202ENST00000374426 RASA4BC9J798 803 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 D6RAR5 112 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 PLD2O14939 933 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 EPHB6O15197 1021 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 EFSO43281 561 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 RASA4O43374 803 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 PIGNO95427 931 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 ALPIP09923 528 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 KRT3P12035 628 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 UNGP13051 313 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-202ENST00000374426 KRT10P13645 584 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 EEF1GP26641 437 aaKnown RBP13.92□□□□□ -0.18
CXCL12-202ENST00000374426 SUOXP51687 545 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 JAM2P57087 298 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 SERINC3Q13530 473 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 CYTH1Q15438 398 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 ZSCAN23Q3MJ62 389 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 KCTD16Q68DU8 428 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 WDR59Q6PJI9 974 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 SLFN11Q7Z7L1 901 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 SDR16C5Q8N3Y7 309 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 SCG3Q8WXD2 468 aaKnown RBP13.92□□□□□ -0.18
CXCL12-202ENST00000374426 EXOC2Q96KP1 924 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 GFM1Q96RP9 751 aaKnown RBP13.92□□□□□ -0.18
CXCL12-202ENST00000374426 CCNL2Q96S94 520 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-202ENST00000374426 PCDHB18PQ96TA0 734 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 FOXP3Q9BZS1 431 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 EPB41L5Q9HCM4 733 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 PCDH12Q9NPG4 1184 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 TAB2Q9NYJ8 693 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 ATXN7L1Q9ULK2 861 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-202ENST00000374426 GPR34Q9UPC5 381 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 DOLKQ9UPQ8 538 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 OR1A2Q9Y585 309 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 PCDHGA7Q9Y5G6 932 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 UNC13CQ8NB66 2214 aa13.92□□□□□ -0.18
CXCL12-202ENST00000374426 PTPN13Q12923 2485 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 COL12A1Q99715 3063 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 A0A1W2PQM1 296 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 TSPAN11A1L157 253 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 TMEM110-MUSTN1A8MSY1 372 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 PYCARD-AS1I3L0S3 204 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 RASGRP1O95267 797 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 RPLP0P05388 317 aaKnown RBP13.91□□□□□ -0.18
CXCL12-202ENST00000374426 CTSEP14091 401 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 XPAP23025 273 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-202ENST00000374426 SLC5A2P31639 672 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 UGT1A5P35504 534 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 SOX5P35711 763 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms