RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 PCDH18Q9HCL0 1135 aa18.17■□□□□ 0.5
TRAPPC3-202ENST00000373162 APC2O95996 2303 aa18.17■□□□□ 0.5
TRAPPC3-202ENST00000373162 GOLGA8CPA6NN73 597 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 TRAFD1O14545 582 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 SIGLEC6O43699 453 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 CSF2P04141 144 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 CKMT2P17540 419 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 MMP12P39900 470 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 NSUN2Q08J23 767 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 EIF2B5Q13144 721 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 ILKQ13418 452 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 RFTN1Q14699 578 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 GRM3Q14832 879 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 UGP2Q16851 508 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 PTAR1Q7Z6K3 402 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 TTC7BQ86TV6 843 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 CPNE8Q86YQ8 564 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 LZTR1Q8N653 840 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 CPLX3Q8WVH0 158 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 NUP85Q9BW27 656 aa18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 MBNL1Q9NR56 388 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 IPO11Q9UI26 975 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-202ENST00000373162 MYLKQ15746 1914 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 GOLGA4Q13439 2230 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 CELSR3Q9NYQ7 3312 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 H3BRJ5 948 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 RIOK3O14730 519 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 FPGTO14772 594 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 MMP20O60882 483 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 GM2AP17900 193 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 AMPD1P23109 780 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 CLDN6P56747 220 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 RALGDSQ12967 914 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 BRAT1Q6PJG6 821 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 SRLQ86TD4 932 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 PARGQ86W56 976 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 TMPRSS12Q86WS5 348 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 CAMK1DQ8IU85 385 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 CACTIN-AS1Q8N1I8 211 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 FAM181AQ8N9Y4 354 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 ZNF599Q96NL3 588 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 ZWILCHQ9H900 591 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 PCDH12Q9NPG4 1184 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 IP6K2Q9UHH9 426 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 ANAPC7Q9UJX3 599 aa18.15■□□□□ 0.5
TRAPPC3-202ENST00000373162 MAFKO60675 156 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 TM7SF2O76062 418 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 CDK4P11802 303 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 EIF4A3P38919 411 aaKnown RBP18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 SLC10A7Q0GE19 358 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 SGCGQ13326 291 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 SKOR2Q2VWA4 1001 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 ZNF542PQ5EBM4 170 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 TMCO4Q5TGY1 634 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 VPS36Q86VN1 386 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 PGBD5Q8N414 524 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 ZNF548Q8NEK5 533 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 NLGN3Q9NZ94 848 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 RCOR3Q9P2K3 495 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 CSNK1G3Q9Y6M4 447 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 KNTC1P50748 2209 aa18.14■□□□□ 0.49
TRAPPC3-202ENST00000373162 ITPR1Q14643 2758 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 CFAP69A5D8W1 941 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 FAM149AA5PLN7 773 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 DFFAO00273 331 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 NEMP1O14524 444 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 TOR1BO14657 336 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 SCAMP1O15126 338 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 DAPK3O43293 454 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 HTRA2O43464 458 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 PALMO75781 387 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 CD48P09326 243 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 HNRNPKP61978 463 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 YPEL5P62699 121 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 ELP6Q0PNE2 266 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 PDE1CQ14123 709 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 IRF4Q15306 451 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 SLC18A3Q16572 532 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 WSCD2Q2TBF2 565 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 CCDC122Q5T0U0 273 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 MDM1Q8TC05 714 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 HSPH1Q92598 858 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 TBATAQ96M53 351 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 MGME1Q9BQP7 344 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 PACSIN1Q9BY11 444 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 SP110Q9HB58 689 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 ATP8A1Q9Y2Q0 1164 aa18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRAPPC3-202ENST00000373162 NBEAQ8NFP9 2946 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 SSU72P8A0A1W2PR75 194 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 K7ESM1 405 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 LZTS3O60299 673 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 CKMT1AP12532 417 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 C6P13671 934 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 ARL4AP40617 200 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 AP1S1P61966 158 aa18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 LBRQ14739 615 aaKnown RBP18.12■□□□□ 0.49
TRAPPC3-202ENST00000373162 SPECC1LQ69YQ0 1117 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms