RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SOX13Q9UN79 622 aa12.19□□□□□ -0.46
USF1-203ENST00000368021 NOVA2Q9UNW9 492 aaKnown RBP12.19□□□□□ -0.46
USF1-203ENST00000368021 LOC285095A0A1B0GVY8 99 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 RASSF9O75901 435 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 TMCC1O94876 653 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 NR1D1P20393 614 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 PAX7P23759 505 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 MAGOHP61326 146 aaKnown RBP12.18□□□□□ -0.46
USF1-203ENST00000368021 ACTN3Q08043 901 aaPredicted RBP12.18□□□□□ -0.46
USF1-203ENST00000368021 NR1H3Q13133 447 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 CYTH1Q15438 398 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 SPANXN3Q5MJ09 141 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 CERCAMQ5T4B2 595 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 FBXW10Q5XX13 1052 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 LRRC6Q86X45 466 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 OSCP1Q8WVF1 389 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 SLC44A1Q8WWI5 657 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 FEM1CQ96JP0 617 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 PAFAH2Q99487 392 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 KIFC1Q9BW19 673 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 BBS2Q9BXC9 721 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 SLC2A11Q9BYW1 496 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 LINC00597Q9H2U6 94 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 MRM3Q9HC36 420 aaKnown RBP12.18□□□□□ -0.46
USF1-203ENST00000368021 CLEC4EQ9ULY5 219 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
USF1-203ENST00000368021 ACTL7AQ9Y615 435 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 RPS6KL1Q9Y6S9 549 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 FAM159BA6NKW6 160 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 NEDD8-MDP1E9PL57 170 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 POC1B-GALNT4F8VUJ3 575 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 INSIG1O15503 277 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 TYRP14679 529 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 HLA-DPA1P20036 260 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 HLA-FP30511 346 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 MSH2P43246 934 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 CD151P48509 253 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 IHHQ14623 411 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 SLC1A5Q15758 541 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 FAM78AQ5JUQ0 283 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 PCID2Q5JVF3 399 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 LY6G5CQ5SRR4 150 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 FOXR1Q6PIV2 292 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 TAOK1Q7L7X3 1001 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 APCDD1Q8J025 514 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 ARFGAP2Q8N6H7 521 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 NUDCD1Q96RS6 583 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 KXD1Q9BQD3 176 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 EPHX3Q9H6B9 360 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 ABCB8Q9NUT2 735 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 EPS15L1Q9UBC2 864 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 CTNNAL1Q9UBT7 734 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 ZNF180Q9UJW8 692 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 ACTL7BQ9Y614 415 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 NUMBLQ9Y6R0 609 aa12.18□□□□□ -0.46
USF1-203ENST00000368021 DENND4AQ7Z401 1863 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 ATP9BO43861 1147 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 CD70P32970 193 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 NUMBP49757 651 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 SERPINH1P50454 418 aaKnown RBP12.17□□□□□ -0.46
USF1-203ENST00000368021 CDK18Q07002 472 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 SFSWAPQ12872 951 aaKnown RBP12.17□□□□□ -0.46
USF1-203ENST00000368021 NAB1Q13506 487 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 DMC1Q14565 340 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 PCSK7Q16549 785 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 TLDC1Q6P9B6 456 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 LINGO4Q6UY18 593 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 KDM7AQ6ZMT4 941 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 BPIFB1Q8TDL5 484 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 CDKL2Q92772 493 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 LRRC3BQ96PB8 259 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 RANBP9Q96S59 729 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 TRIM56Q9BRZ2 755 aaKnown RBP12.17□□□□□ -0.46
USF1-203ENST00000368021 NOD2Q9HC29 1040 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 IRAK4Q9NWZ3 460 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 DUS2Q9NX74 493 aaKnown RBP12.17□□□□□ -0.46
USF1-203ENST00000368021 SENP1Q9P0U3 644 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 INTS6Q9UL03 887 aaKnown RBP12.17□□□□□ -0.46
USF1-203ENST00000368021 WNT6Q9Y6F9 365 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 IKBKGQ9Y6K9 419 aa12.17□□□□□ -0.46
USF1-203ENST00000368021 ZCWPW2A0A1B0GU75 182 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 ADH1CP00326 375 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 FGF1P05230 155 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 INHBAP08476 426 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 TPH1P17752 444 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 ADRA1DP25100 572 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 VIPR2P41587 438 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 RGRP47804 291 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 SCNN1BP51168 640 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 SULT2A1Q06520 285 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 MSLNQ13421 630 aaPredicted RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 EFTUD2Q15029 972 aaKnown RBP eCLIP12.16□□□□□ -0.463e-7■■■■□ 19.6
USF1-203ENST00000368021 EML3Q32P44 896 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 ANKRD20A4Q4UJ75 823 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 PITRM1Q5JRX3 1037 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 TTC19Q6DKK2 380 aaPredicted RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 TANGO2Q6ICL3 276 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 PKN3Q6P5Z2 889 aa12.16□□□□□ -0.46
USF1-203ENST00000368021 TRMT10BQ6PF06 316 aaKnown RBP12.16□□□□□ -0.46
USF1-203ENST00000368021 KIAA0907Q7Z7F0 614 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms