RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Eif2dQ61211 570 aaKnown RBP14.93□□□□□ -0.02
Nup88-202ENSMUST00000108530 HiraQ61666 1015 aa14.93□□□□□ -0.02
Nup88-202ENSMUST00000108530 Cyp2d40Q6P8N9 338 aa14.93□□□□□ -0.02
Nup88-202ENSMUST00000108530 PdgfrlQ6PE55 375 aa14.93□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ssx9Q6XAS3 170 aa14.93□□□□□ -0.02
Nup88-202ENSMUST00000108530 Gpr62Q80UC6 358 aa14.93□□□□□ -0.02
Nup88-202ENSMUST00000108530 Slc23a4A0A0J9YUX7 615 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Arfip1G5E8V9 373 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Eef1bO70251 225 aaKnown RBP14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Spp1P10923 294 aaKnown RBP14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 SpnP15702 395 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 RabggtbP53612 339 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 IdsQ08890 552 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Mettl17Q3U2U7 461 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Srbd1Q497V5 1015 aaKnown RBP14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Rimbp2Q80U40 1072 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 MylipQ8BM54 445 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 KmoQ91WN4 479 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 DcxrQ91X52 244 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ecrg4Q99LS0 148 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Nme5Q99MH5 211 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Mfsd10Q9D2V8 456 aaKnown RBP14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Actrt2Q9D9L5 377 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Trip4Q9QXN3 581 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Adam17Q9Z0F8 827 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 HephQ9Z0Z4 1157 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 PtprdQ64487 1912 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Tmem240B2RWJ3 173 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Olfr603L7N1Y4 312 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Pik3cdO35904 1043 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Yme1l1O88967 715 aaKnown RBP14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 TshrP47750 764 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Kpna2P52293 529 aaKnown RBP14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 UtyP79457 1212 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Arf5P84084 180 aaKnown RBP14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ctnnb1Q02248 781 aaKnown RBP14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Hbq1bQ3U0A6 142 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Hepacam2Q4VAH7 463 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Tmem199Q5SYH2 208 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Q6PAC4 1279 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Efr3bQ6ZQ18 817 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Znf879Q8BI99 563 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 C5ar2Q8BW93 344 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Arhgap25Q8BYW1 648 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Dennd1cQ8CFK6 786 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 BfarQ8R079 450 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Nol6Q8R5K4 1152 aaKnown RBP14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Socs7Q8VHQ2 579 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Bag2Q91YN9 210 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Atad3Q925I1 591 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Themis3Q9CU24 569 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 4930524N10RikQ9D519 233 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Dtwd1Q9D8U7 304 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Nmnat1Q9EPA7 285 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Gucy1a3Q9ERL9 691 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Adrm1Q9JKV1 407 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 MgamB5THE2 1827 aa14.92□□□□□ -0.02
Nup88-202ENSMUST00000108530 Irs2P81122 1321 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Gm3604A0A087WPN2 559 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 PtproE9Q612 1226 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Zfp212G3X8R7 492 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 ChgbP16014 677 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Mtf2Q02395 593 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Arhgap45Q3TBD2 1116 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Gpatch4Q3TFK5 415 aaKnown RBP14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Tmem65Q4VAE3 234 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Itm2aQ61500 263 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Grid2Q61625 1007 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Atp2a3Q64518 1038 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 C1qtnf6Q6IR41 264 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Znf280cQ6P3Y5 742 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Mtmr12Q80TA6 747 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Gpr21Q8BX79 349 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Fmo9Q8C116 539 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Zc2hc1cQ8CCG1 527 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Trim61Q8JZK6 461 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Dlg2Q91XM9 852 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Glra3Q91XP5 464 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Rnf146Q9CZW6 359 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Tspan11Q9D1D1 253 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Tmem80Q9D3H0 123 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Q9D937 123 aaKnown RBP14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ccdc182Q9D9C6 152 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Rsc1a1Q9ER99 582 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Capn7Q9R1S8 813 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 ClcnkbQ9WUB6 687 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Olfr1160A2AVT0 319 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Rgsl1H3BL40 1073 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Sema3aO08665 772 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 MntO08789 591 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Klc2O88448 599 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Prdx3P20108 257 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Pdha1P35486 390 aaKnown RBP14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ephb3P54754 993 aaKnown RBP14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Tial1P70318 392 aaKnown RBP14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Heatr9Q5QNV8 569 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Tigd3Q7TM95 470 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Q8BGA7 448 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Brd8Q8R3B7 951 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Elmod3Q91YP6 381 aa14.91□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms