RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 IL17RCQ8NAC3 791 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 POMGNT2Q8NAT1 580 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 OR4N2Q8NGD1 307 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 ZKSCAN4Q969J2 545 aaPredicted RBP5.32□□□□□ -1.56
LINC00397-202ENST00000606785 ARHGEF26Q96DR7 871 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 SPATA17Q96L03 361 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 BBS4Q96RK4 519 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 ABHD1Q96SE0 405 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 TM2D2Q9BX73 214 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 PDZD7Q9H5P4 517 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 MLXIPLQ9NP71 852 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 SH3BP4Q9P0V3 963 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 CPSF2Q9P2I0 782 aaKnown RBP5.32□□□□□ -1.56
LINC00397-202ENST00000606785 ZNF112Q9UJU3 913 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 NENFQ9UMX5 172 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 CARD8Q9Y2G2 431 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 AAR2Q9Y312 384 aaKnown RBP5.32□□□□□ -1.56
LINC00397-202ENST00000606785 FAM96BQ9Y3D0 163 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 UTYO14607 1347 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 CYP2D7A0A087X1C5 515 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 EBAG9O00559 213 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 SEC14L5O43304 696 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 HCRTR2O43614 444 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 KIF1CO43896 1103 aaKnown RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 SLC25A12O75746 678 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 INSRRP14616 1297 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 MCCP23508 829 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 KLRC2P26717 231 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 EEF1DP29692 281 aaKnown RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 HOXA7P31268 230 aaPredicted RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 PPP5CP53041 499 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 MFAP4P55083 255 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 SOX10P56693 466 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 CLDN2P57739 230 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 SIM1P81133 766 aaPredicted RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 SLC18A2Q05940 514 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 RUNX2Q13950 521 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 LSM12Q3MHD2 195 aaKnown RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 ZSCAN23Q3MJ62 389 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 SYTL3Q4VX76 610 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 CXorf66Q5JRM2 361 aaPredicted RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 DENND5BQ6ZUT9 1274 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 TBC1D26Q86UD7 250 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 TDRPQ86YL5 185 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 GALNT13Q8IUC8 556 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 VRK3Q8IV63 474 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 CADM3Q8N126 398 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 ARL14EPQ8N8R7 260 aaPredicted RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 SYT2Q8N9I0 419 aaPredicted RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 POGLUT1Q8NBL1 392 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 CAGE1Q8TC20 777 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 KAT2AQ92830 837 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 GCNAQ96QF7 691 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 FIZ1Q96SL8 496 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 SRSF8Q9BRL6 282 aaKnown RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 ADPGKQ9BRR6 497 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 NUF2Q9BZD4 464 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 EDEM3Q9BZQ6 932 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 KLHL4Q9C0H6 718 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 ACTR5Q9H9F9 607 aaPredicted RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 ERVMER34-1Q9H9K5 563 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 ZNF304Q9HCX3 659 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 OGFRQ9NZT2 677 aa5.31□□□□□ -1.56
LINC00397-202ENST00000606785 CNOT8Q9UFF9 292 aaKnown RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 IPO11Q9UI26 975 aaKnown RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 PTRH2Q9Y3E5 179 aaKnown RBP5.31□□□□□ -1.56
LINC00397-202ENST00000606785 OR2A25A4D2G3 310 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 GRID2IPA4D2P6 1211 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 TARM1B6A8C7 271 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 HS6ST1O60243 411 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 TBX10O75333 385 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 NEURL1O76050 574 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 MT-CYBP00156 380 aaPredicted RBP5.3□□□□□ -1.56
LINC00397-202ENST00000606785 PLAUP00749 431 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 LCKP06239 509 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 PCNAP12004 261 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 TMEM11P17152 192 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 TFEBP19484 476 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 RYKP34925 604 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 CENPAP49450 140 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 RARRES1P49788 294 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 CAMPP49913 170 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 CLCNKBP51801 687 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 SHBQ15464 509 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 COL28A1Q2UY09 1125 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 CERKLQ49MI3 558 aaPredicted RBP5.3□□□□□ -1.56
LINC00397-202ENST00000606785 TCP11X2Q5H9J9 407 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 ERMARDQ5T6L9 678 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 ADALQ6DHV7 355 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 LRIG3Q6UXM1 1119 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 CYB5R4Q7L1T6 521 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 KDELC2Q7Z4H8 507 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 GALNTL5Q7Z4T8 443 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 TRIM74Q86UV6 250 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 TRIM73Q86UV7 250 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 CCDC25Q86WR0 208 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 WIPF2Q8TF74 440 aaPredicted RBP5.3□□□□□ -1.56
LINC00397-202ENST00000606785 ATP6V1E2Q96A05 226 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 PGAP3Q96FM1 320 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms