RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TSPAN6O43657 245 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PCDHGA12O60330 932 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CBFA2T3O75081 653 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PALMO75781 387 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TRIM16O95361 564 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 UGT2B4P06133 528 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TCF4P15884 667 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TIMP2P16035 220 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 AMPD1P23109 780 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 AKT2P31751 481 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SSR1P43307 286 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 RXRGP48443 463 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CSNK1DP48730 415 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CCT8P50990 548 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 NXPH1P58417 271 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SHC2P98077 582 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 IL10RBQ08334 325 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 NSUN2Q08J23 767 aaKnown RBP eCLIP9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SGCGQ13326 291 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 DPYSQ14117 519 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 RFTN1Q14699 578 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 GRM3Q14832 879 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SMTNL2Q2TAL5 461 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PRAMEF14Q5SWL7 426 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 NYAP1Q6ZVC0 841 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PARS2Q7L3T8 475 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SRLQ86TD4 932 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ZSCAN30Q86W11 494 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ARHGAP12Q8IWW6 846 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 OXR1Q8N573 874 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 FAM174AQ8TBP5 190 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ZNF564Q8TBZ8 553 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CTNNBL1Q8WYA6 563 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 VOPP1Q96AW1 172 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CCDC42Q96M95 316 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CHP1Q99653 195 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CDC6Q99741 560 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TRIM5Q9C035 493 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 NHEJ1Q9H9Q4 299 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PDFQ9HBH1 243 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ABHD10Q9NUJ1 306 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CTTNBP2NLQ9P2B4 639 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 DKK3Q9UBP4 350 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 LCMT1Q9UIC8 334 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PCOLCE2Q9UKZ9 415 aa9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ZFR2Q9UPR6 939 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CEP295Q9C0D2 2601 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 IGLON5A6NGN9 336 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 AKR1B15C9JRZ8 316 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 NEMP1O14524 444 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 YKT6O15498 198 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 INSIG1O15503 277 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PROSCO94903 275 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PAK4O96013 591 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TMEM253P0C7T8 217 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PRLRP16471 622 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 HNRNPA2B1P22626 353 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ARRB1P49407 418 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 RENBPP51606 427 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SUOXP51687 545 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SLC25A11Q02978 314 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 FOXC1Q12948 553 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TBX2Q13207 712 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 KRT81Q14533 505 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TMEM259Q4ZIN3 620 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TMCO4Q5TGY1 634 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SEL1L3Q68CR1 1132 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TXNRD3NBQ6F5E7 133 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SARM1Q6SZW1 724 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TMCO3Q6UWJ1 677 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 GLRX5Q86SX6 157 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SPATS2Q86XZ4 545 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 DCP2Q8IU60 420 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CNGA4Q8IV77 575 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TMEM145Q8NBT3 493 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ASB12Q8WXK4 309 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TSC1Q92574 1164 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ZNF641Q96N77 438 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ZNF599Q96NL3 588 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 LENG8Q96PV6 779 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CSPG4P5Q96PW8 444 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 C1QTNF2Q9BXJ5 285 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PACSIN1Q9BY11 444 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SUV39H2Q9H5I1 410 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SP110Q9HB58 689 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PCDH18Q9HCL0 1135 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ETNK2Q9NVF9 386 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 LHX3Q9UBR4 397 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 IPO11Q9UI26 975 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CA5BQ9Y2D0 317 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 MYLKQ15746 1914 aa9.85□□□□□ -0.83
TNFRSF1A-214ENST00000543048 COL5A1P20908 1838 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-214ENST00000543048 AREL1O15033 823 aa9.84□□□□□ -0.83
TNFRSF1A-214ENST00000543048 BUB1BO60566 1050 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-214ENST00000543048 MFAP3LO75121 409 aa9.84□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ITGAVP06756 1048 aa9.84□□□□□ -0.83
TNFRSF1A-214ENST00000543048 THEGLP0DJG4 465 aa9.84□□□□□ -0.83
TNFRSF1A-214ENST00000543048 XPAP23025 273 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-214ENST00000543048 IL4RP24394 825 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms