RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TEFMQ96QE5 360 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 GDF15Q99988 308 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 VGLL1Q99990 258 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 LRRC1Q9BTT6 524 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 MECRQ9BV79 373 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 APOL5Q9BWW9 433 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 MVB12BQ9H7P6 319 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 ERVMER34-1Q9H9K5 563 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 KLHL1Q9NR64 748 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 LIN7CQ9NUP9 197 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 PRR34Q9NV39 138 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 SLC52A1Q9NWF4 448 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 SLC9A2Q9UBY0 812 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 DDX20Q9UHI6 824 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 RALYQ9UKM9 306 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 NOB1Q9ULX3 412 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 FAF1Q9UNN5 650 aaPredicted RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 CORO2BQ9UQ03 480 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 DHDHQ9UQ10 334 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 MORC2Q9Y6X9 1032 aaPredicted RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 ADAMTS9Q9P2N4 1935 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 PDS5AQ29RF7 1337 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 CACNA1FO60840 1977 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 COL4A4P53420 1690 aaPredicted RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 A0A1W2PPC4 97 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 FAM234BA2RU67 622 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 POM121BA6NF01 834 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 AGAP5A6NIR3 686 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 SMIM1B2RUZ4 78 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 KIF28PB7ZC32 967 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 APOL1O14791 398 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 DCXO43602 365 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 ZNF821O75541 412 aaPredicted RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 RFPL2O75678 378 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 RPP40O75818 363 aaKnown RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 CBX6O95503 412 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 EGFP01133 1207 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 ARSAP15289 507 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 GATA1P15976 413 aaPredicted RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 STX2P32856 288 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 HOXA1P49639 335 aaPredicted RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 ALDH18A1P54886 795 aaKnown RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 MRPS5P82675 430 aaKnown RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 RELQ04864 619 aaPredicted RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 ZNF543Q08ER8 600 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 SF3A3Q12874 501 aaKnown RBP eCLIP0.82□□□□□ -2.28
COPB1-212ENST00000534771 CHAF1AQ13111 956 aaPredicted RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 RIGQ13278 110 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 ITGA9Q13797 1035 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 PLEKHG6Q3KR16 790 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 AMZ1Q400G9 498 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 ATP13A5Q4VNC0 1218 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 FAM102BQ5T8I3 360 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 ZDHHC20Q5W0Z9 365 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 ARL6IP4Q66PJ3 421 aaKnown RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 HIBCHQ6NVY1 386 aaPredicted RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 FBXO38Q6PIJ6 1188 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 KIAA1324Q6UXG2 1013 aaKnown RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 ATF7IPQ6VMQ6 1270 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 ZNF852Q6ZMS4 543 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 KRBA2Q6ZNG9 492 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 RSRC2Q7L4I2 434 aaKnown RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 KMT5CQ86Y97 462 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 HERC6Q8IVU3 1022 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 CCDC105Q8IYK2 499 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 SCAIQ8N9R8 606 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 ZMIZ2Q8NF64 920 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 TRIM58Q8NG06 486 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 OR4N2Q8NGD1 307 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 RASSF8Q8NHQ8 419 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 MAGEC3Q8TD91 643 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 OTUD7AQ8TE49 926 aaPredicted RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 C2CD4CQ8TF44 421 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 ZNF473Q8WTR7 871 aaKnown RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 HMGB4Q8WW32 186 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 ZNF583Q96ND8 569 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 OPRPNQ99935 248 aaPredicted RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 RBM4BQ9BQ04 359 aaKnown RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 COLEC11Q9BWP8 271 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 FKRPQ9H9S5 495 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 PELI2Q9HAT8 420 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 WDR6Q9NNW5 1121 aaKnown RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 GRHL1Q9NZI5 618 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 CRCT1Q9UGL9 99 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 TP53TG3Q9ULZ0 132 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 PCDHGB6Q9Y5F9 930 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 FRMPD2Q68DX3 1309 aaPredicted RBP0.82□□□□□ -2.28
COPB1-212ENST00000534771 CADPSQ9ULU8 1353 aa0.82□□□□□ -2.28
COPB1-212ENST00000534771 OR6C68A6NDL8 312 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 NPIPB13A6NJU9 1138 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 SLC38A8A6NNN8 435 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 NPIPB5A8MRT5 1133 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 EFCAB8A8MWE9 144 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 NPIPB4C9JG80 1138 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 GRM8O00222 908 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 SOCS6O14544 535 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 WNT9BO14905 357 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 PCDH17O14917 1159 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 HNRNPDLO14979 420 aaKnown RBP0.81□□□□□ -2.28
COPB1-212ENST00000534771 RASA4O43374 803 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms