RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 AGKQ53H12 422 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 CERCAMQ5T4B2 595 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 EEPD1Q7L9B9 569 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 CANT1Q8WVQ1 401 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 TRUB1Q8WWH5 349 aaKnown RBP17.92■□□□□ 0.46
NUP54-205ENST00000507257 SLC9A7Q96T83 725 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 GPATCH1Q9BRR8 931 aaKnown RBP17.92■□□□□ 0.46
NUP54-205ENST00000507257 MLPHQ9BV36 600 aaPredicted RBP17.92■□□□□ 0.46
NUP54-205ENST00000507257 PFDN4Q9NQP4 134 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 MTF2Q9Y483 593 aaPredicted RBP17.92■□□□□ 0.46
NUP54-205ENST00000507257 ZNF839A8K0R7 811 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 HBP1O60381 514 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 USP12O75317 370 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 HSD17B1P14061 328 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 GLRBP48167 497 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 HCAR3P49019 387 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 SULT1E1P49888 294 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 CDH17Q12864 832 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 INPP5AQ14642 412 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 LCN8Q6JVE9 175 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 EFCAB12Q6NXP0 572 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 ABRAXAS1Q6UWZ7 409 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 EPHX4Q8IUS5 362 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 CBR4Q8N4T8 237 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 CCNYL1Q8N7R7 359 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 PCYOX1LQ8NBM8 494 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 TXNDC5Q8NBS9 432 aaKnown RBP17.91■□□□□ 0.46
NUP54-205ENST00000507257 SNX27Q96L92 541 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 PGLYRP2Q96PD5 576 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 HOPXQ9BPY8 73 aaPredicted RBP17.91■□□□□ 0.46
NUP54-205ENST00000507257 DCUN1D5Q9BTE7 237 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 CHRAC1Q9NRG0 131 aa17.91■□□□□ 0.46
NUP54-205ENST00000507257 TMEM233B4DJY2 109 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 EEF2KO00418 725 aaKnown RBP17.9■□□□□ 0.46
NUP54-205ENST00000507257 RASAL1O95294 804 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 CPNE6O95741 557 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 PGK1P00558 417 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 FCGR1AP12314 374 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 STMN1P16949 149 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 NMBRP28336 390 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 LRPAP1P30533 357 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 CD68P34810 354 aaPredicted RBP17.9■□□□□ 0.46
NUP54-205ENST00000507257 SCN1AP35498 2009 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 HMGCS2P54868 508 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 PRAMEP78395 509 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 TMEM62Q0P6H9 643 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 PMS2P3Q13401 168 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 RAB39AQ14964 217 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 TMTC4Q5T4D3 741 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 OTUD1Q5VV17 481 aaPredicted RBP17.9■□□□□ 0.46
NUP54-205ENST00000507257 DCAF15Q66K64 600 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 NAPEPLDQ6IQ20 393 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 CNSTQ6PJW8 725 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 CYP2R1Q6VVX0 501 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 LINC00523Q86TU6 105 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 CCDC117Q8IWD4 279 aaPredicted RBP17.9■□□□□ 0.46
NUP54-205ENST00000507257 CRYBG2Q8N1P7 616 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 LRRC52Q8N7C0 313 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 HDAC11Q96DB2 347 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 CENPNQ96H22 339 aaPredicted RBP17.9■□□□□ 0.46
NUP54-205ENST00000507257 NPY6RQ99463 290 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 OSBPL2Q9H1P3 480 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 ACSS2Q9NR19 701 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 FADS3Q9Y5Q0 445 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 TSC2P49815 1807 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 UNCXA6NJT0 531 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 KCNK1O00180 336 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 ZBTB24O43167 697 aaPredicted RBP17.9■□□□□ 0.46
NUP54-205ENST00000507257 SULT1C4O75897 302 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 ZBTB11O95625 1053 aaPredicted RBP17.9■□□□□ 0.46
NUP54-205ENST00000507257 AHSGP02765 367 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 GJB1P08034 283 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 JUNBP17275 347 aaPredicted RBP17.9■□□□□ 0.46
NUP54-205ENST00000507257 ATP6V1B2P21281 511 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 IL10P22301 178 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 FASP25445 335 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 EPHX2P34913 555 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 NOS2P35228 1153 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 GRIA3P42263 894 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 TMBIM6P55061 237 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 MTA1Q13330 715 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 MAP7D1Q3KQU3 841 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 MEX3CQ5U5Q3 659 aaKnown RBP17.9■□□□□ 0.46
NUP54-205ENST00000507257 FASTKD5Q7L8L6 764 aaKnown RBP17.9■□□□□ 0.46
NUP54-205ENST00000507257 ANKRD23Q86SG2 305 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 DEFB106AQ8N104 65 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 CENPSQ8N2Z9 138 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 C7orf31Q8N865 590 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 SHCBP1Q8NEM2 672 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 NTAN1Q96AB6 310 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 NXNL1Q96CM4 212 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 MUC13Q9H3R2 512 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 TMEM165Q9HC07 324 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 ANLNQ9NQW6 1124 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 PICK1Q9NRD5 415 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 GTSE1Q9NYZ3 720 aa17.9■□□□□ 0.46
NUP54-205ENST00000507257 EVPLQ92817 2033 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 DHRS12A0PJE2 317 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 GPC4O75487 556 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 GNAO1P09471 354 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms